CF417388

Overview
NameCF417388
Unique NameCF417388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3485 contig Csv1_Contig3485:63..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP1_ORYSJ (Serine carboxypeptidase 1 OS=Oryza sativa subsp. japonica GN=CBP1 PE=2 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.041e-28
Identity = 60/140 (42.86%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  216 WANNKAVQKALRVRE-GTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            W NN  V+ A+  +   ++  W  C   L +  D  S + YH+ LT +GY+  +YSGD DM VPY  TEAW +SL   +   W+PW +  QV+GY   Y+    + LTFAT+KGAGH  PEY+P+E LA   RW A   L
Sbjct:  375 WLNNDDVRAAIHAQPVSSIGSWLICTNVLDFIHDAGSMISYHKNLTGQGYRAFIYSGDHDMCVPYTGTEAWTRSLGYGVIDSWRPWHLNGQVSGYTQGYE----HGLTFATIKGAGHTVPEYKPQESLAFYSRWLAGSKL 510          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP1_HORVU (Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CBP1 PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 3.028e-28
Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 3
Query:  216 WANNKAVQKALRVRE-GTVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            W +N AV+ A+  +    +  W  C   L +  D  S + YH+ LT +GY+ +++SGD DM VP+  +EAW KSL   +   W+PW+   QV+GY   Y+    + LTFAT+KGAGH  PEY+P+E  A   RW A   L
Sbjct:  364 WLDNAAVRSAIHAQSVSAIGPWLLCTDKLYFVHDAGSMIAYHKNLTSQGYRAIIFSGDHDMCVPFTGSEAWTKSLGYGVVDSWRPWITNGQVSGYTEGYE----HGLTFATIKGAGHTVPEYKPQEAFAFYSRWLAGSKL 499          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP21_ARATH (Serine carboxypeptidase-like 21 OS=Arabidopsis thaliana GN=SCPL21 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 6.745e-28
Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = 3
Query:  216 WANNKAVQKALRVREG-TVEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXA 620
            W N+ AV+KA+  +E   +  W  C+ +L Y  D  S ++YHR LT  G++ L++SGD DM VPY  +EAW K++   +   W+PW+  +QVAG+   Y      +LTF T+KGAGH  PEY+P+E L    R+ A
Sbjct:  359 WLNDPAVRKAVHAKEEKAIGNWELCSSNLEYRHDTGSMIEYHRNLTLSGFRALIFSGDHDMCVPYTGSEAWTKAMGYKVVDEWRPWMSNNQVAGFTQGYAN----NLTFLTIKGAGHTVPEYKPRESLDFYSRFLA 490          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP20_ARATH (Serine carboxypeptidase-like 20 OS=Arabidopsis thaliana GN=SCPL20 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 4.372e-27
Identity = 57/134 (42.54%), Postives = 80/134 (59.70%), Query Frame = 3
Query:  216 WANNKAVQKALRVREGT-VEYWTRCNKSLSYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRW 614
            W N+  ++KA+  +E + +  W  C+  LS+  D  S +D+HR LT  GY+ L+YSGD DM VP+  +EAW KSL   +   W+ W+   QVAGY   Y      +LTF T+KGAGH  PEY+P+E L    R+
Sbjct:  362 WLNDPEIRKAIHTKEESEIGRWELCSGKLSFYHDAGSMIDFHRNLTLSGYRALIYSGDHDMCVPFTGSEAWTKSLGYKVIDEWRAWISNDQVAGYTQGYAN----NLTFLTIKGAGHTVPEYKPREALDFYSRF 491          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP32_ARATH (Serine carboxypeptidase-like 32 OS=Arabidopsis thaliana GN=SCPL32 PE=2 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.745e-21
Identity = 56/147 (38.10%), Postives = 83/147 (56.46%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGT-VEYWTRCNKSL----SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYP 629
            Y+  + N   VQKAL   +G  ++ WT CN  +    ++T    S +  ++KL   G++V VYSGD D  VP ++T   I  L L I+T W+PW  E+QV+G++  Y+G     LTFAT +GAGH+ P ++P E LA    +    P
Sbjct:  317 YAKVFYNRADVQKALHATDGVHLKNWTICNDDILNHWNWTDSKRSVLPIYKKLIAGGFRVWVYSGDTDGRVPVLSTRYCINKLELPIKTAWRPWYHETQVSGWFQEYEG-----LTFATFRGAGHDVPSFKPSESLAFFSAFLNGVP 458          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP30_ARATH (Putative serine carboxypeptidase-like 30 OS=Arabidopsis thaliana GN=SCPL30 PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 56/150 (37.33%), Postives = 81/150 (54.00%), Query Frame = 3
Query:  192 DNYFYSYNWANNKAVQKALRVREGT-VEYWTRCNKSL--SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            D+Y   Y   N   VQKAL   +G  ++ W+ CN  +  ++T  V S +  ++KL   G ++ VYSGD D  +P + T   + +L L I+T W+PW  E QV+G+   Y G     LTFAT +GAGH  P ++P   LA I  +    PL
Sbjct:  338 DDYVKVYY--NRADVQKALHASDGVNLKNWSICNMEIFHNWTYVVQSVLPIYQKLIAGGLRIWVYSGDTDGCIPVLGTRYSLNALGLPIKTAWRPWYHEKQVSGWVQEYDG-----LTFATFRGAGHTVPSFKPSSSLAFISAFVKGVPL 480          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP21_HORVU (Serine carboxypeptidase II-1 (Fragment) OS=Hordeum vulgare GN=CXP;2-1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 8.830e-20
Identity = 57/153 (37.25%), Postives = 79/153 (51.63%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL*SPVHII 653
            YS  + N   VQKA R     + Y WT C+  LS  +     S +  +R+L   G ++ V+SGD D VVP  AT   I +L L   T W PW  E +VAG+   YKG     LT  T++GAGH  P +RP++ L + + +    P+  P H I
Sbjct:  174 YSTKYYNLPEVQKAFRANVTGIPYSWTACSDVLSDHWKDSPRSMLPIYRELIAAGIRIWVFSGDADSVVPLTATRYSIDALYLPTVTNWYPWYDEEEVAGWCQVYKG-----LTLVTIRGAGHEVPLHRPQQALKLFEHFLQDKPMPRPAHSI 321          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP23_ARATH (Putative serine carboxypeptidase-like 23 OS=Arabidopsis thaliana GN=SCPL23 PE=2 SV=2)

HSP 1 Score: 96.6709 bits (239), Expect = 1.153e-19
Identity = 62/203 (30.54%), Postives = 99/203 (48.77%), Query Frame = 3
Query:   33 GKLSIQNIYEPQCSLDILRRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            GK++  +IY P C         +F+  R ++EE    + Y P   +           Y+  + N   VQ+A+     ++ Y WT CN  ++  +     S +  +++LT  G ++ V+SGD D VVP   T   +  LNL ++T W PW  E QV G+   Y+G     LTFAT++GAGH  P  +P+  L ++  + A   L
Sbjct:  270 GKVNGYSIYSPSCVHQT--NQTKFLHGRLLVEE----YEYDPCTES-----------YAEIYYNRPDVQRAMHANLTSIPYKWTLCNMVVNNNWKDSEFSMLPIYKELTAAGLRIWVFSGDTDAVVPVTGTRLALSKLNLPVKTPWYPWYSEKQVGGWTEVYEG-----LTFATIRGAGHEVPVLQPERALTLLRSFLAGKEL 450          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP36_ARATH (Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.382e-19
Identity = 55/151 (36.42%), Postives = 83/151 (54.97%), Query Frame = 3
Query:  195 NYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYTSDVS----SGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            NY  +Y   N K VQ+A+      + Y WT CN  L +  +      S     ++L  KG +V++Y+GDVD+V+P+ +T A +K++NLT+   W+PW     V G+   YKG    +LTF TVKGAGH+ P  +P   L +   +  + PL
Sbjct:  334 NYLKAY--LNIKEVQEAIHANTTKIPYEWTSCNTKLLWEWNEKDRYVSLTPILQELMGKGVRVMLYNGDVDLVIPFTSTLAVVKTMNLTVVKEWRPWFTGGHVGGFTEDYKG----NLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 478          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP40_ARATH (Serine carboxypeptidase-like 40 OS=Arabidopsis thaliana GN=SCPL40 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.723e-19
Identity = 66/201 (32.84%), Postives = 96/201 (47.76%), Query Frame = 3
Query:   39 LSIQNIYEPQC-SLDILRRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYTSDVSSGV-DYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            L I NIY P C +  + RRP +    R           + P           D+Y  +Y   N   VQ AL      + Y W  C+  +   +D  + V    ++L  +G +V V+SGD D  +P  +T+  +K +NLT +T W PW +  +V GY   YKGK    LTFATV+GAGH  P ++PK  L++   +    PL
Sbjct:  321 LDIYNIYAPLCLNSTLTRRPKRGTTIRE----------FDPCS---------DHYVQAY--LNRPEVQAALHANATKLPYEWQPCSSVIKKWNDSPTTVIPLIKELMGQGVRVWVFSGDTDGRIPVTSTKYSLKKMNLTAKTAWHPWYLGGEVGGYTEEYKGK----LTFATVRGAGHQVPSFQPKRSLSLFIHFLNDTPL 496          
The following BLAST results are available for this feature:
BLAST of CF417388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CBP1_ORYSJ1.041e-2842.86Serine carboxypeptidase 1 OS=Oryza sativa subsp. j... [more]
CBP1_HORVU3.028e-2840.71Serine carboxypeptidase 1 OS=Hordeum vulgare GN=CB... [more]
SCP21_ARATH6.745e-2841.91Serine carboxypeptidase-like 21 OS=Arabidopsis tha... [more]
SCP20_ARATH4.372e-2742.54Serine carboxypeptidase-like 20 OS=Arabidopsis tha... [more]
SCP32_ARATH2.745e-2138.10Serine carboxypeptidase-like 32 OS=Arabidopsis tha... [more]
SCP30_ARATH8.830e-2037.33Putative serine carboxypeptidase-like 30 OS=Arabid... [more]
CBP21_HORVU8.830e-2037.25Serine carboxypeptidase II-1 (Fragment) OS=Hordeum... [more]
SCP23_ARATH1.153e-1930.54Putative serine carboxypeptidase-like 23 OS=Arabid... [more]
SCP36_ARATH4.382e-1936.42Serine carboxypeptidase-like 36 OS=Arabidopsis tha... [more]
SCP40_ARATH5.723e-1932.84Serine carboxypeptidase-like 40 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-318 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417388 ID=CF417388; Name=CF417388; organism=Citrus sinensis; type=EST; length=658bp
AAGCTGATCTTCAAAATATAACAGCGTGCATTGGAAAATTATCTATCCAG
AACATATATGAACCTCAATGTAGTTTAGATATACTCAGAAGACCAGTGCA
ATTCATATGGGATCGCGCCATCATCGAAGAAGATTCTTTTGATTTTCTCT
ATTCGCCAGTTCAATCAGCTCCAAGCCATTGGTGTCGGAAAGATAACTAT
TTCTACTCGTACAATTGGGCAAATAATAAAGCTGTGCAAAAGGCTCTGAG
AGTTCGGGAGGGGACAGTAGAATATTGGACGAGATGCAATAAAAGTTTGT
CTTACACATCTGATGTCTCAAGTGGTGTTGATTATCACCGAAAGCTCACC
AAGAAAGGCTATCAAGTTTTGGTTTACAGCGGAGATGTCGACATGGTAGT
TCCATATATGGCTACTGAAGCATGGATAAAGTCATTAAATTTGACGATTG
AAACTGGCTGGCAGCCGTGGTTGGTGGAAAGTCAAGTTGCAGGATATTGG
TACCGTTACAAGGGAAAGAACAATTATCATTTGACATTTGCCACAGTAAA
GGGAGCAGGTCATAATGGTCCAGAGTACAGGCCTAAGGAATGTCTTGCAA
TGATCGACAGGTGGNTCGCATCCTATCCTCTCTAGAGCCCCGTTCATATA
ATTATTAA
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