CF417388

Overview
NameCF417388
Unique NameCF417388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3485 contig Csv1_Contig3485:63..720. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP34_ARATH (Serine carboxypeptidase-like 34 OS=Arabidopsis thaliana GN=SCPL34 PE=2 SV=2)

HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19
Identity = 53/145 (36.55%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYTSDV-SSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            Y+  + N K VQ+AL      + Y WT C+ ++S+ SD  +S +   R L   G +V V+SGD D  +P  AT   +K L L I   W PW  + QV G+   Y G     L F TV+GAGH  P ++P+E L +I  +  +  L
Sbjct:  355 YTEKYMNRKDVQEALHANVTNISYPWTHCSDTVSFWSDAPASMLPTLRTLVSAGLRVWVFSGDTDGRIPVTATRYSLKKLGLKIVQDWTPWYTKLQVGGWTVEYDG-----LMFVTVRGAGHQVPTFKPREALQLIHHFLGNKKL 494          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP31_ARATH (Serine carboxypeptidase-like 31 OS=Arabidopsis thaliana GN=SCPL31 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 2.175e-18
Identity = 52/145 (35.86%), Postives = 79/145 (54.48%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGT-VEYWTRCNKSL--SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYP 629
            Y+  + N   VQK+L   +G  ++ W+ CN  +  ++T    S +  + KL   G ++ VYSGD D  VP +AT   + +L L I+T W+PW  E QV+G+   Y+G     LTFAT +GAGH  P ++P   LA    + +  P
Sbjct:  321 YARVFYNRADVQKSLHASDGVNLKNWSICNMEIFNNWTGSNPSVLPIYEKLIAGGLRIWVYSGDTDGRVPVLATRYSLNALELPIKTAWRPWYHEKQVSGWLQEYEG-----LTFATFRGAGHAVPCFKPSSSLAFFSAFLSGVP 460          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP37_ARATH (Serine carboxypeptidase-like 37 OS=Arabidopsis thaliana GN=SCPL37 PE=2 SV=2)

HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18
Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 3
Query:  183 CRKDNYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSL----SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            C KD   Y   + N K VQKA+      + Y WT CN  L    S     +  +    +L  +G +V++Y+GDVD+ +P+ +T A +K +NLT+   ++PW    Q+ G+   YKG    +LTF TVKGAGH+ P  +P   L +   +  + PL
Sbjct:  336 CSKD---YLKAYLNRKKVQKAIHANTTKLPYEWTSCNNELTENWSENDRDTPMIPILHELMGEGVRVMIYNGDVDLEIPFASTLAVVKEMNLTVVKEFRPWFTGGQLGGFTEDYKG----NLTFVTVKGAGHSVPTDQPIHALNIFTSFIRNTPL 483          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP24_ARATH (Serine carboxypeptidase 24 OS=Arabidopsis thaliana GN=SCPL24 PE=1 SV=1)

HSP 1 Score: 91.6633 bits (226), Expect = 3.710e-18
Identity = 50/146 (34.25%), Postives = 77/146 (52.74%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSL--SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            Y+  + N   VQ+A+      + Y WT C+  L  ++     + +  +++L   G ++ ++SGD D VVP  AT   +  LNL ++T W PW  ++QV G+   YKG     LTFATV+GAGH  P + PK  L +   + A   L
Sbjct:  321 YAEKYFNRPDVQRAMHANVTGIRYKWTACSDVLIKTWKDSDKTMLPIYKELAASGLRIWIFSGDTDSVVPVTATRFSLSHLNLPVKTRWYPWYTDNQVGGWTEVYKG-----LTFATVRGAGHEVPLFEPKRALILFRSFLAGKEL 461          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP35_ARATH (Serine carboxypeptidase-like 35 OS=Arabidopsis thaliana GN=SCPL35 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.410e-17
Identity = 65/204 (31.86%), Postives = 97/204 (47.55%), Query Frame = 3
Query:   39 LSIQNIYEPQCSLDIL----RRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYTSDV-SSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            + I +IY P C   +L    R+P   +  R +  +D +D    P    P      +NYF      N K VQ AL      + Y ++ C+  +   SD  S+ +   +KL   G ++ +YSGD D  VP  +T   IK + L +E+ W+ W  +SQVAG+   Y G     L F TV+GAGH  P   P + L +   + +S PL
Sbjct:  284 IDIYSIYTPVCLSSLLSSSPRKPKIVVSPRLLTFDDLWDKF--PAGYDPCTESYAENYF------NRKDVQVALHANVTNLPYPYSPCSGVIKRWSDAPSTMIPIIQKLLTGGLRIWIYSGDTDGRVPVTSTRYSIKKMGLKVESPWRSWFHKSQVAGWVETYAG----GLNFVTVRGAGHQVPALAPAQSLTLFSHFISSVPL 475          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP38_ARATH (Serine carboxypeptidase-like 38 OS=Arabidopsis thaliana GN=SCPL38 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 53/153 (34.64%), Postives = 82/153 (53.59%), Query Frame = 3
Query:  189 KDNYFYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYT----SDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            + NY  +Y   N++ VQ+A+      + Y W  CN  L+         +S V     L  +G +VLVYSGDVD  +P+ AT A +K++NLT+   W+PW    Q+ G+   Y+     +LT+ATVKG+GH+ P  +P   L +   +  + PL
Sbjct:  337 RSNYVKAY--LNSENVQEAMHANTTKLPYEWKACNHYLNSVWIDADKDASMVPILHDLMGEGVRVLVYSGDVDAAIPFTATMAVLKTMNLTVVNEWRPWFTGGQLGGFTEDYE----RNLTYATVKGSGHSVPLDQPVHALNLFTSFIRNTPL 483          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP25_ARATH (Serine carboxypeptidase-like 25 OS=Arabidopsis thaliana GN=SCPL25 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.357e-17
Identity = 51/146 (34.93%), Postives = 78/146 (53.42%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            Y+  + N   VQKAL      + Y WT C++ L+  +    S+ +  +R++   G +V V+SGDVD VVP  AT   +  L+L+ +  W PW V+ QV G+   Y+G     LTF TV+GAGH  P ++P+    +   +    PL
Sbjct:  330 YAEIYYNRPDVQKALHANTTKIPYKWTACSEVLNRNWNDTDSTVLPIYREMIAGGIRVWVFSGDVDSVVPVTATRYSLARLSLSTKLPWYPWYVKKQVGGWTEVYEG-----LTFVTVRGAGHEVPLFKPRAAFELFKYFLRGKPL 470          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP22_ARATH (Serine carboxypeptidase-like 22 OS=Arabidopsis thaliana GN=SCPL22 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.137e-17
Identity = 49/148 (33.11%), Postives = 78/148 (52.70%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSL----SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            Y+  + N   VQ+A+      + Y WT C+ S+    ++    +S +  +++L   G ++ VYSGD D V+P  AT   +  LNL ++T W PW   +QV G    Y+G     LTF TV+GAGH  P ++P+  L ++  + A   L
Sbjct:  318 YAEIYYNRPEVQRAMHANHTAIPYKWTACSDSVFNNWNWRDSDNSMLPIYKELIAAGLRIWVYSGDTDSVIPVTATRYSLGKLNLRVKTRWYPWYSGNQVGGRTEVYEG-----LTFVTVRGAGHEVPFFQPQSALILLRSFLAGNEL 460          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP29_ARATH (Serine carboxypeptidase-like 29 OS=Arabidopsis thaliana GN=SCPL29 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 3
Query:  222 NNKAVQKALRVREGTV-EYWTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            N   VQKAL V  G     W  C+  +S  +    SS ++ + +L   G ++ V+SGD D VVP  +T   I +LNL   + + PW ++ QV G+  +Y G     L F TV+GAGH  P +RPK+ LA+   + +  PL
Sbjct:  327 NLPEVQKALHVPPGLAPSKWDTCSDVVSEHWNDSPSSVLNIYHELIAAGLRIWVFSGDADAVVPVTSTRYSIDALNLRPLSAYGPWYLDGQVGGWSQQYAG-----LNFVTVRGAGHEVPLHRPKQALALFKAFISGTPL 461          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: PPGB_MOUSE (Lysosomal protective protein OS=Mus musculus GN=Ctsa PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.472e-16
Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = 3
Query:  213 NWANNKAVQKALRVREGTVEYWTRCN--KSLSYTSDVSS-GVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYP 629
            N+ NN  V+KAL + E ++  W  CN   +L Y     S    Y + L+ + YQ+L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      QVAG+      K   H+TF T+KGAGH  P  +P+    M  R+    P
Sbjct:  333 NYLNNPYVRKALHIPE-SLPRWDMCNFLVNLQYRRLYQSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQVAGF-----VKECSHITFLTIKGAGHMVPTDKPRAAFTMFSRFLNKEP 473          
The following BLAST results are available for this feature:
BLAST of CF417388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
SCP34_ARATH9.762e-1936.55Serine carboxypeptidase-like 34 OS=Arabidopsis tha... [more]
SCP31_ARATH2.175e-1835.86Serine carboxypeptidase-like 31 OS=Arabidopsis tha... [more]
SCP37_ARATH3.710e-1834.84Serine carboxypeptidase-like 37 OS=Arabidopsis tha... [more]
SCP24_ARATH3.710e-1834.25Serine carboxypeptidase 24 OS=Arabidopsis thaliana... [more]
SCP35_ARATH1.410e-1731.86Serine carboxypeptidase-like 35 OS=Arabidopsis tha... [more]
SCP38_ARATH5.357e-1734.64Serine carboxypeptidase-like 38 OS=Arabidopsis tha... [more]
SCP25_ARATH5.357e-1734.93Serine carboxypeptidase-like 25 OS=Arabidopsis tha... [more]
SCP22_ARATH9.137e-1733.11Serine carboxypeptidase-like 22 OS=Arabidopsis tha... [more]
SCP29_ARATH3.472e-1636.43Serine carboxypeptidase-like 29 OS=Arabidopsis tha... [more]
PPGB_MOUSE3.472e-1636.73Lysosomal protective protein OS=Mus musculus GN=Ct... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-318 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417388 ID=CF417388; Name=CF417388; organism=Citrus sinensis; type=EST; length=658bp
AAGCTGATCTTCAAAATATAACAGCGTGCATTGGAAAATTATCTATCCAG
AACATATATGAACCTCAATGTAGTTTAGATATACTCAGAAGACCAGTGCA
ATTCATATGGGATCGCGCCATCATCGAAGAAGATTCTTTTGATTTTCTCT
ATTCGCCAGTTCAATCAGCTCCAAGCCATTGGTGTCGGAAAGATAACTAT
TTCTACTCGTACAATTGGGCAAATAATAAAGCTGTGCAAAAGGCTCTGAG
AGTTCGGGAGGGGACAGTAGAATATTGGACGAGATGCAATAAAAGTTTGT
CTTACACATCTGATGTCTCAAGTGGTGTTGATTATCACCGAAAGCTCACC
AAGAAAGGCTATCAAGTTTTGGTTTACAGCGGAGATGTCGACATGGTAGT
TCCATATATGGCTACTGAAGCATGGATAAAGTCATTAAATTTGACGATTG
AAACTGGCTGGCAGCCGTGGTTGGTGGAAAGTCAAGTTGCAGGATATTGG
TACCGTTACAAGGGAAAGAACAATTATCATTTGACATTTGCCACAGTAAA
GGGAGCAGGTCATAATGGTCCAGAGTACAGGCCTAAGGAATGTCTTGCAA
TGATCGACAGGTGGNTCGCATCCTATCCTCTCTAGAGCCCCGTTCATATA
ATTATTAA
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