CF417388

Overview
NameCF417388
Unique NameCF417388
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP2_HORVU (Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CBP2 PE=1 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15
Identity = 51/148 (34.46%), Postives = 77/148 (52.03%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVR-EGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYR-YKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            YS  + N + VQ AL     G + Y WT C+ +++  +     S +  +R+L   G ++ V+SGD D VVP  AT   I +L L   T W PW  + Q  G W + YKG     LT  +V+GAGH  P +RP++ L +  ++    P+
Sbjct:  324 YSTAYYNRRDVQTALHANVTGAMNYTWTNCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLATTTSWYPWYDDLQEVGGWSQVYKG-----LTLVSVRGAGHEVPLHRPRQALILFQQFLQGKPM 466          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP33_ARATH (Serine carboxypeptidase-like 33 OS=Arabidopsis thaliana GN=SCPL33 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.723e-15
Identity = 57/200 (28.50%), Postives = 91/200 (45.50%), Query Frame = 3
Query:   36 KLSIQNIYEPQCSLDILRRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYN---------WANNKAVQKALRVREGTVEYWTRCNKSL--SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAM 602
            ++ I NIY P+C               +        F  +    A   W ++  +F  Y+         + N   V+ +L      V  W  CN S+  +Y   VSS +  + KL K G ++ VYSGD D  VP + +   +++L +++++ W+ W    QV G    Y+G     LTF TV+GAGH  P  +P+E LA+
Sbjct:  275 EIDIYNIYAPKCI------------SNSSSGASYLGFGVNDKSPAVKDWFKRVRWFEGYDPCYSNYAEEYFNRVDVRLSLHATTRNVARWKVCNDSILQTYHFTVSSMLPTYSKLIKAGLKIWVYSGDADGRVPVIGSRYCVEALGISVKSEWRSWFHNHQVGGRITEYEG----GLTFVTVRGAGHLVPLNKPEEALAL 458          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: HNLS_SORBI (P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicolor PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15
Identity = 50/151 (33.11%), Postives = 78/151 (51.66%), Query Frame = 3
Query:  201 FYSYNWANNKAVQKALRVR-EGTVEY-WTRCNKSL--SYTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLV---ESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            F S N+ N   VQ AL     G VEY WT C+ ++   +       +  +R+L + G +V VYSGD D VVP  +T   + +L L ++T W PW +   E +V G+  +Y+G     LT+ +  GAGH  P +RP +   +  ++    P+
Sbjct:  347 FNSINYLNLPEVQTALHANVSGIVEYPWTVCSNTIFDQWGQAADDLLPVYRELIQAGLRVWVYSGDTDSVVPVSSTRRSLAALELPVKTSWYPWYMAPTEREVGGWSVQYEG-----LTYVSPSGAGHLVPVHRPAQAFLLFKQFLKGEPM 492          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP2_WHEAT (Serine carboxypeptidase 2 OS=Triticum aestivum GN=CBP2 PE=1 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15
Identity = 49/147 (33.33%), Postives = 75/147 (51.02%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVR-EGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            YS  + N + VQ AL     G + Y W  C+ +++  +     S +  +R+L   G ++ V+SGD D VVP  AT   I +L L   T W PW  + +V G+   YKG     LT  +V+GAGH  P +RP++ L +   +    P+
Sbjct:  295 YSTAYYNRRDVQMALHANVTGAMNYTWATCSDTINTHWHDAPRSMLPIYRELIAAGLRIWVFSGDTDAVVPLTATRYSIGALGLPTTTSWYPWYDDQEVGGWSQVYKG-----LTLVSVRGAGHEVPLHRPRQALVLFQYFLQGKPM 436          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP39_ARATH (Serine carboxypeptidase-like 39 OS=Arabidopsis thaliana GN=SCPL39 PE=2 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 3.839e-15
Identity = 51/148 (34.46%), Postives = 74/148 (50.00%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEYWTRCNKSLSY----TSDVSSGVDYHRKLTKKGY-QVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            Y   + N + VQ+++ V +     W  CN++  +    T   +S +   ++L K    +V VY+GD D V+P   T   +K +NLT  T W PW  E QV G+   YKG   Y    ATV GAGH  P Y+PK  L +   +  + PL
Sbjct:  355 YIAAYLNREDVQRSMHVTK-LPHTWMLCNEATGFNWNQTDYSASMLPILKELMKHDQLRVWVYTGDTDTVIPLTVTMHALKMMNLTAVTDWLPWFSEGQVGGFTEEYKGNFRY----ATVIGAGHEVPLYKPKAALTLFKHFIRNSPL 497          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP27_ARATH (Serine carboxypeptidase-like 27 OS=Arabidopsis thaliana GN=SCPL27 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.117e-14
Identity = 51/146 (34.93%), Postives = 72/146 (49.32%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSL-SYTSDVS-SGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            YS  + N   VQKAL      + Y W  C+  + SY  D   S +  +++L   G ++ V+SGD D VVP  AT   + +L L   T W PW    +V G+   YKG     LT  TV GAGH  P +RP++   +   +  S P+
Sbjct:  316 YSNVYFNRLDVQKALHANVTRLSYPWKACSDIVGSYWDDSPLSMLPIYKELITAGLKIWVFSGDTDAVVPITATRYSVDALKLATITNWYPWYDHGKVGGWSQVYKG-----LTLVTVAGAGHEVPLHRPRQAFILFRSFLESKPM 456          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: PPGB_HUMAN (Lysosomal protective protein OS=Homo sapiens GN=CTSA PE=1 SV=2)

HSP 1 Score: 78.9518 bits (193), Expect = 2.488e-14
Identity = 55/189 (29.10%), Postives = 89/189 (47.09%), Query Frame = 3
Query:   87 RRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCN--KSLSYTSDVSS-GVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYP 629
            R P++ +W +A++       +  P  +  +          +  + NN  V+KAL + E  +  W  CN   +L Y     S    Y + L+ + YQ+L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      Q+AG+   +      H+ F T+KGAGH  P  +P     M  R+    P
Sbjct:  307 RLPLKRMWHQALLRSGDKVRMDPPCTNTTA----------ASTYLNNPYVRKALNIPE-QLPQWDMCNFLVNLQYRRLYRSMNSQYLKLLSSQKYQILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVKYGDSGEQIAGFVKEFS-----HIAFLTIKGAGHMVPTDKPLAAFTMFSRFLNKQP 479          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: PPGB_BOVIN (Lysosomal protective protein OS=Bos taurus GN=CTSA PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.488e-14
Identity = 55/192 (28.65%), Postives = 92/192 (47.92%), Query Frame = 3
Query:   87 RRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNYFYSYNWANNKAVQKALRVREGTVEYWTRCNKSLS------YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVE-----SQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYP 629
            R P++ +W + ++       L  P  +  +          + N+ N+  V+KAL + E  +  W  CN  ++      Y S  S    Y + L+ + Y++L+Y+GDVDM   +M  E ++ SLN  +E   +PWLV+      Q+AG+   +      H+ F T+KGAGH  P  +P+  L M  R+    P
Sbjct:  306 RLPLKRVWHQTLLRSGEKVHLDPPCTNTTA----------ASNYLNDPHVRKALHIPE-QLPRWDLCNFLVNIQYRRLYQSMCSQ---YLKLLSAQKYRILLYNGDVDMACNFMGDEWFVDSLNQKMEVQRRPWLVDYGESGEQIAGFVKEFS-----HIAFLTIKGAGHMVPTDKPQAALTMFSRFLNRQP 478          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: CBP23_HORVU (Serine carboxypeptidase II-3 OS=Hordeum vulgare GN=CXP;2-3 PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.250e-14
Identity = 61/212 (28.77%), Postives = 93/212 (43.87%), Query Frame = 3
Query:   30 IGKLSIQNIYEPQCSLDILRRPVQFIWDRAIIEEDSFDFLYSPVQSAPSHWCRKDNY-----FYSYNWANNKAVQKALRVREGTVEY-WTRCNKSLSYTSDVSSGV-DYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVES----QVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            +  + I NIY P C  + L  P                    P+  APS     DN+     +Y   + N   VQKAL      +++ W+ C+  L+   D +  V    ++L K   +V VYSGD D  VP  ++   +  L L +   W+PW   +    +V GY  +YKG     L+  TV+GAGH  P Y+P+  L ++  + A   L
Sbjct:  326 LADIDIYNIYAPNCQSEKLVTP--------------------PI--APSI----DNFDPCTDYYVEAYLNRPDVQKALHANVTRLDHPWSACSDVLTRWVDSAKTVLPIIQELMKNSIRVWVYSGDTDGRVPVTSSRLSVNQLQLPVAAKWRPWFSSTKGAGEVGGYIVQYKGD----LSLVTVRGAGHEVPSYQPRRALVLVQNFLAGKAL 507          
BLAST of CF417388 vs. ExPASy Swiss-Prot
Match: SCP26_ARATH (Serine carboxypeptidase-like 26 OS=Arabidopsis thaliana GN=SCPL26 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13
Identity = 46/146 (31.51%), Postives = 71/146 (48.63%), Query Frame = 3
Query:  204 YSYNWANNKAVQKALRVREGTVEY-WTRCNKSLS--YTSDVSSGVDYHRKLTKKGYQVLVYSGDVDMVVPYMATEAWIKSLNLTIETGWQPWLVESQVAGYWYRYKGKNNYHLTFATVKGAGHNGPEYRPKECLAMIDRWXASYPL 632
            YS  + N+  VQKA+      + Y W  C+  +   +     S +  +++L   G ++ V+SGD D VVP   T   I++L L   + W PW  + QV G+   YKG     LT  T+ GAGH  P +RP+    +   +  + PL
Sbjct:  310 YSGMYFNSPEVQKAMHANITGLAYPWKGCSDIVGEKWADSPLSMLPIYKELIAAGLRIWVFSGDTDSVVPITGTRYSIRALKLQPLSKWYPWNDDGQVGGWSQVYKG-----LTLVTIHGAGHEVPLFRPRRAFLLFQSFLDNKPL 450          
The following BLAST results are available for this feature:
BLAST of CF417388 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 54
Match NameE-valueIdentityDescription
CBP2_HORVU1.010e-1534.46Serine carboxypeptidase 2 OS=Hordeum vulgare GN=CB... [more]
SCP33_ARATH1.723e-1528.50Serine carboxypeptidase-like 33 OS=Arabidopsis tha... [more]
HNLS_SORBI2.939e-1533.11P-(S)-hydroxymandelonitrile lyase OS=Sorghum bicol... [more]
CBP2_WHEAT2.939e-1533.33Serine carboxypeptidase 2 OS=Triticum aestivum GN=... [more]
SCP39_ARATH3.839e-1534.46Serine carboxypeptidase-like 39 OS=Arabidopsis tha... [more]
SCP27_ARATH1.117e-1434.93Serine carboxypeptidase-like 27 OS=Arabidopsis tha... [more]
PPGB_HUMAN2.488e-1429.10Lysosomal protective protein OS=Homo sapiens GN=CT... [more]
PPGB_BOVIN2.488e-1428.65Lysosomal protective protein OS=Bos taurus GN=CTSA... [more]
CBP23_HORVU3.250e-1428.77Serine carboxypeptidase II-3 OS=Hordeum vulgare GN... [more]
SCP26_ARATH3.593e-1331.51Serine carboxypeptidase-like 26 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-318 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_F09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417388 ID=CF417388; Name=CF417388; organism=Citrus sinensis; type=EST; length=658bp
AAGCTGATCTTCAAAATATAACAGCGTGCATTGGAAAATTATCTATCCAG
AACATATATGAACCTCAATGTAGTTTAGATATACTCAGAAGACCAGTGCA
ATTCATATGGGATCGCGCCATCATCGAAGAAGATTCTTTTGATTTTCTCT
ATTCGCCAGTTCAATCAGCTCCAAGCCATTGGTGTCGGAAAGATAACTAT
TTCTACTCGTACAATTGGGCAAATAATAAAGCTGTGCAAAAGGCTCTGAG
AGTTCGGGAGGGGACAGTAGAATATTGGACGAGATGCAATAAAAGTTTGT
CTTACACATCTGATGTCTCAAGTGGTGTTGATTATCACCGAAAGCTCACC
AAGAAAGGCTATCAAGTTTTGGTTTACAGCGGAGATGTCGACATGGTAGT
TCCATATATGGCTACTGAAGCATGGATAAAGTCATTAAATTTGACGATTG
AAACTGGCTGGCAGCCGTGGTTGGTGGAAAGTCAAGTTGCAGGATATTGG
TACCGTTACAAGGGAAAGAACAATTATCATTTGACATTTGCCACAGTAAA
GGGAGCAGGTCATAATGGTCCAGAGTACAGGCCTAAGGAATGTCTTGCAA
TGATCGACAGGTGGNTCGCATCCTATCCTCTCTAGAGCCCCGTTCATATA
ATTATTAA
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