CF417392
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGA15_ARATH (Beta-galactosidase 15 OS=Arabidopsis thaliana GN=BGAL15 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.734e-29 Identity = 74/198 (37.37%), Postives = 101/198 (51.01%), Query Frame = 3 Query: 9 ITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGN---KDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 ++ D SDYLWYMT+V + + L G+ +L + S H +H F+NGQ +G+ + F A G N I LLSI VGLPN G +E + G+ G V + G + KDL+ KWSY+ GL G L S SE+ S + AP G+EP+ +DL G+GKG WING +IGR Sbjct: 463 VSNDESDYLWYMTTVNLKEQDPVL--GKNMSLRINSTAHVLHAFVNGQHIGNYRVENGKFHYVFEQDAKFNPGANVITLLSITVGLPNYGAFFENFSAGITGPVFIIGRNGDETIVKDLSTHKWSYKTGLSGFENQLFS-SESPST---------------------WSAPLGSEPVVVDLLGLGKGTAWINGNNIGR 636
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGAL7_ORYSJ (Beta-galactosidase 7 OS=Oryza sativa subsp. japonica GN=Os05g0428100 PE=2 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.272e-28 Identity = 72/201 (35.82%), Postives = 108/201 (53.73%), Query Frame = 3 Query: 3 INITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTREN-RRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHG---LDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 + T+D +DYLWY+ S + +S+ G Q L V+S H +H F+N +++GS G+ + R + +L+ G N I+LLS+ VG P+ G + E G++ + G + N DL W YQVGL GE ++ + SV W + L WYK F P GN+ + L+L MGKG+VW+NG+SIGR Sbjct: 430 LTTTKDETDYLWYIVSYKNRASD----GNQIAHLYVKSLAHILHAFVNNEYVGSVHGSHDGPRNIVLNTHMSLKEGDNTISLLSVMVGSPDSGAYMERRTFGIQTVGIQQGQQPMHLLNNDL----WGYQVGLFGEKDSIYTQEGTNSVRWM--DINNLIYHPLTWYKTTFSTPPGNDAVTLNLTSMGKGEVWVNGESIGR 620
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGA10_ORYSJ (Putative beta-galactosidase 10 OS=Oryza sativa subsp. japonica GN=Os06g0628500 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.999e-26 Identity = 68/194 (35.05%), Postives = 96/194 (49.48%), Query Frame = 3 Query: 18 DTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNK--DLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 D SDYLWY TS+ S+ TL V + GH ++ F+NG +G + F PA L G N I+LLS +GL N G +E G+ G V +D+ K DL+ WSY+ GL GE + + D G++ + WYK F APAG + + +DL G+ KG W+NG ++GR Sbjct: 459 DQSDYLWYRTSINHKGEASY-------TLFVNTTGHELYAFVNGMLVGQNHSPNGHFVFQLESPAKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPV-KLIDNNGKGIDLSNSSWSYKAGLAGEYRQIHLDKPGCTWDNNNGTVPI--NKPFTWYKTTFQAPAGEDTVVVDLLGLNKGVAWVNGNNLGR 642
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGAL1_ORYSJ (Beta-galactosidase 1 OS=Oryza sativa subsp. japonica GN=Os01g0533400 PE=2 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.680e-24 Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 18 DTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNK-DLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 D SDYLWY TS+ S+ L V + GH ++ F+NG+ +G + F P L G N I+LLS VGL N G +E TG+ G V +G DL+ WSY+ GL E + + W + + WYKA F+AP+G + + +DL G+ KG W+NG ++GR Sbjct: 478 DQSDYLWYRTSLNHKGEGSY-------KLYVNTTGHELYAFVNGKLIGKNHSADGDFVFQLESPVKLHDGKNYISLLSATVGLKNYGPSFEKMPTGIVGGPVKLIDSNGTAIDLSNSSWSYKAGLASEYRQI--HLDKPGYKWNGNNGTIPINRPFTWYKATFEAPSGEDAVVVDLLGLNKGVAWVNGNNLGR 661
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGA13_ORYSJ (Beta-galactosidase 13 OS=Oryza sativa subsp. japonica GN=Os10g0330600 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 4.888e-24 Identity = 65/193 (33.68%), Postives = 93/193 (48.19%), Query Frame = 3 Query: 18 DTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNK-DLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 D SDYLWY TS++ S+ TL V + GH ++ F+NG +G + F L G N I+LLS +GL N G +E G+ G V ++G DL+ WSY+ GL GE + D G++ + WYK F APAG + + +DL G+ KG W+NG ++GR Sbjct: 478 DQSDYLWYRTSLDHKGEASY-------TLFVNTTGHELYAFVNGMLVGKNHSPNGHFVFQLESAVKLHDGKNYISLLSATIGLKNYGPLFEKMPAGIVGGPVKLIDNNGTGIDLSNSSWSYKAGLAGEYRQIHLDKPGYRWDNNNGTVPIN--RPFTWYKTTFQAPAGQDTVVVDLLGLNKGVAWVNGNNLGR 661
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGA14_ORYSJ (Beta-galactosidase 14 OS=Oryza sativa subsp. japonica GN=Os10g0340600 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.510e-20 Identity = 62/195 (31.79%), Postives = 87/195 (44.62%), Query Frame = 3 Query: 12 TRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNK-DLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQGQQSLKWYKAYFDAPAGNEPLALDLRGMGKGQVWINGQSIGR 593 T D SDYLWY TS+E S++ L V + GH ++ F+NG+ +G + EN FTF + PN G +E G+ G V G+ DL+ WSY+ GL GE + W + + WYK F APAG + + +DL G+ KG W+NG S+GR Sbjct: 476 TTDQSDYLWYRTSLEHKGEGSYV-------LYVNTTGHELYAFVNGKLVGQQYSPNEN--FTFQ------------------LKSPNYGGSFELLPAGIVGGPVKLIDSSGSAIDLSNNSWSYKAGLAGEYRKIYLDKPGNK--WRSHNSTIPINRPFTWYKTTFQAPAGEDSVVVDLHGLNKGVAWVNGNSLGR 641
BLAST of CF417392 vs. ExPASy Swiss-Prot
Match: BGAL2_DICDI (Probable beta-galactosidase 2 OS=Dictyostelium discoideum GN=glb2 PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.166e-17 Identity = 61/203 (30.05%), Postives = 101/203 (49.75%), Query Frame = 3 Query: 9 ITRDTSDYLWYMTSVEISSSESFLRGGQKPTLTVESAGHAVHVFINGQFLGSAFGTRENRRFTFSGPANLRAGINKIALLSIAVGLPNVGLHYETWETGVRGAVVLHGLDHGNKDLTWQKWSYQVGLKGEAMNLVSPSEATSVDWTRGSLAAQG---QQSLKWYKAYFDAPA-----GNEPLALDLRGMGKGQVWINGQSIGR 593 IT+DTSDY WY T+V +S +G LT+ VH+FI+ ++ GSAF + P N + ++ +LS+ +GL N H E + G+ G++++ G+++LT +W + GL GE + + + +++W ++ Q+ L WYK + ALD+ M KG +W+NG SIGR Sbjct: 488 ITKDTSDYCWYSTNVTTTSLSYNEKGNI--FLTITEFYDYVHIFIDNEYQGSAFSPSLCQLQL--NPIN-NSTTFQLQILSMTIGLENYASHMENYTRGILGSILI-----GSQNLTNNQWLMKSGLIGENIKIFNNDN--TINWQTSPSSSSSSLIQKPLTWYKLNISLVGLPIDISSTVYALDMSSMNKGMIWVNGYSIGR 678 The following BLAST results are available for this feature:
BLAST of CF417392 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417392 ID=CF417392; Name=CF417392; organism=Citrus sinensis; type=EST; length=687bpback to top |