CF417399
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P_TREPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Treponema pallidum GN=gap PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.760e-32 Identity = 86/201 (42.79%), Postives = 117/201 (58.21%), Query Frame = 1 Query: 94 LKVAINGFGRIGRNFLRCWHGRK--DSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRN--PVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-----IPTYVVGVNADAYKPDE-PIISNASCTTNCLAPFVKV-LDQKFGIIKGTMTTTHSYTGDQRLLD 660 ++VAINGFGRIGR L+ +K +V A+ D + ++ LKYDS G + + D + V G I+ V R P LPW DLGI++VIE TG++ + G H++AGAK+V+I+AP K + T V+GVN + P E ++SNASCTTNCLAP V V L + GI G MTT HSYT Q+ +D Sbjct: 1 MRVAINGFGRIGRLVLQAMAEQKLLGKEFDVAAVVDLSTDARYFAYQLKYDSVQGKMGSSLSAPAEDILEVGGHRIKCVCGRGLKPSQLPWKDLGIEVVIEATGIYANESSYG-HLEAGAKRVIISAPAKSSDASKPVKTIVMGVNEHEFDPAEHKVVSNASCTTNCLAPVVHVFLKEGVGIETGLMTTIHSYTATQKTVD 200
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: E4PD_PSYIN (D-erythrose-4-phosphate dehydrogenase OS=Psychromonas ingrahamii (strain 37) GN=epd PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 3.604e-32 Identity = 76/194 (39.18%), Postives = 111/194 (57.22%), Query Frame = 1 Query: 94 LKVAINGFGRIGRNFLRC-WHGRKDSPLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIP-TYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 669 +++AING+GRIGR+ +R + + ++VV IN+ +HL +YDST G F V + + + + I +V +LPW + ID+V++ TG++ R A HI AGAKKV+ + P D+ T V G+N DE IS ASCTTNC+ P + LD+ F I GT+TT HS DQ ++DA H Sbjct: 3 IRIAINGYGRIGRSVVRALYENNRQDEMKVVVINELAEPSAIAHLTQYDSTHGRFPFPVN-LQNNLLKIKNDDIHLVRFSELADLPWHEHDIDIVLDCTGIYGSRADADAHIAAGAKKVIFSHPADPDVDATVVYGINHQQLTGDETFISGASCTTNCMVPVIDTLDKHFAIKCGTITTIHSAMNDQPVIDAYH 195
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P3_ANAVT (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gap3 PE=3 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 1.789e-31 Identity = 79/196 (40.31%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 91 KLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHR 672 K++V INGFGR+GR LR G + LE V IN+ GG A+HLLK+DS G + +V+ G + + +D + P ++PW D G+DLV+E +G F + + G +KV++ AP K + V+GVN Y+P++ +++ ASCTTNCLAP VKV+ + GI G +TT H T Q L+DA H+ Sbjct: 2 KIRVGINGFGRMGRLALRAAWGWPE--LEFVHINEIKGGAVAAAHLLKFDSVHGRWTPEVEAEG-ERVLIDSTPLSFSEYGKPEDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPEKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGIITTIHDNTNTQTLVDAPHK 194
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P3_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 3 OS=Anabaena sp. (strain PCC 7120) GN=gap3 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.789e-31 Identity = 82/198 (41.41%), Postives = 118/198 (59.60%), Query Frame = 1 Query: 91 KLKVAINGFGRIGRNFLRC-WHGRKDSP-LEVVAINDT-GGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEP-IISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHR 672 K++V INGFGR+GR LR W D P LE V IN+ GG A+HLLK+DS G + +V+ G + + +DG + P ++PW D G+DLV+E +G F + + G +KV++ AP K + V+GVN Y+P++ +++ ASCTTNCLAP VKV+ + GI G +TT H T Q L+DA H+ Sbjct: 2 KVRVGINGFGRMGRLALRAAW----DWPELEFVHINEIKGGAVAAAHLLKFDSVHGRWTPEVEAEG-ERVLIDGTPLSFSEYGKPDDVPWEDFGVDLVLECSGKFRTPATLDPYFKRGVQKVIVAAPVKEEALNIVMGVNDYLYEPEKHHLLTAASCTTNCLAPVVKVIHEGLGIKHGIITTIHDNTNTQTLVDAPHK 194
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3PC_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic (Fragment) OS=Hordeum vulgare GN=GAPC PE=2 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.204e-31 Identity = 67/149 (44.97%), Postives = 95/149 (63.76%), Query Frame = 1 Query: 217 SHLLKYDSTLGIFEA-DVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLD 660 +++ KYD+ G ++ +VK + + K + V RNP +PW G + V+E TGVF D++ A HI+ GAKKV+I+AP K D P +V GVN YK D I+SNASCTTNC AP KV++ +FGI++G MTT H+ T Q+ +D Sbjct: 12 TYMFKYDTVHGQWKHHEVKVKDSKTLLFGEKEVAVFGCRNPEEIPWAAAGAEYVVESTGVFTDKDKAAAHIKGGAKKVIISAPSK-DAPMFVCGVNEKEYKSDIDIVSNASCTTNCPAPLAKVINDRFGIVEGLMTTVHAMTATQKTVD 159
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 5.754e-30 Identity = 83/200 (41.50%), Postives = 122/200 (61.00%), Query Frame = 1 Query: 94 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 669 +K+ INGFGRIGR LR R D+ LEV+ IND + ++LL++DST G+ +V+ +GK+I + S PV DL G+ ++IE +G F++ + ++ GAKKVL++AP G+ PT V GVN Y+ ++ I+SNASCTTN +AP +LD+ F I +G +TT HSYT DQ+L+D +H Sbjct: 1 MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSTHGLLNKEVR-------YSNGKLI-IGSLEIPVFNSIKDLKGVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAIAPICAILDKAFSIKEGMLTTIHSYTSDQKLIDLAH 191
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29 Identity = 80/200 (40.00%), Postives = 118/200 (59.00%), Query Frame = 1 Query: 94 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKVIQVVSNRNPVNLPWGDL-GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-----PTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASH 669 +K+ INGFGRIGR LR R D+ LEV+ IND + ++LL++DS G+ +V+ + + S PV DL G+D++IE +G F++ + ++ GAKKVL++AP G+ PT V GVN Y+ ++ I+SNASCTTN +AP +LD+ F I +G +TT HSYT DQ+L+D +H Sbjct: 1 MKIFINGFGRIGRCVLRAILERNDTNPKLEVIGINDPANWEILAYLLEHDSVHGLLPKEVR--------YSNYKLIIGSLEIPVFNSIKDLKGVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAIAPICAILDKAFKIKEGMLTTIHSYTSDQKLIDLAH 191
BLAST of CF417399 vs. ExPASy Swiss-Prot
Match: G3P_MELGA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 4.416e-22 Identity = 49/98 (50.00%), Postives = 66/98 (67.35%), Query Frame = 1 Query: 367 DLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLD 660 + V+E TGVF E AG H++ GAK+V+I+AP D P +V+GVN + Y I+SNA CTTNCLAP KV+ FGI++G MTT H+ T Q+ +D Sbjct: 2 EYVVESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNALCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITATQKTVD 98 The following BLAST results are available for this feature:
BLAST of CF417399 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417399 ID=CF417399; Name=CF417399; organism=Citrus sinensis; type=EST; length=672bpback to top |