CF417404

Overview
NameCF417404
Unique NameCF417404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length664
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_ORENI (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Oreochromis niloticus GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 110/175 (62.86%), Postives = 127/175 (72.57%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD+G VI+ALCFSPNRYWLCAAT  SIKIWDLE K IV++L+ ++                      CTSL WS DG TLF+GYTD +IRVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDSGDVINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQEVISTNSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLIRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_MOUSE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Mus musculus GN=Gnb2l1 PE=1 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WS DG TLF+GYTD ++RVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_MACFA (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Macaca fascicularis GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WS DG TLF+GYTD ++RVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_HUMAN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Homo sapiens GN=GNB2L1 PE=1 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WS DG TLF+GYTD ++RVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_DANRE (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Danio rerio GN=gnb2l1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 110/175 (62.86%), Postives = 125/175 (71.43%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G  I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++L+ D+                      CTSL WS DG TLF+GYTD +IRVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKMVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDTINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELRQDIITTNSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLIRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_CHICK (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Gallus gallus GN=GNB2L1 PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WS DG TLF+GYTD ++RVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_BOVIN (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Bos taurus GN=GNB2L1 PE=2 SV=3)

HSP 1 Score: 232.261 bits (591), Expect = 1.768e-60
Identity = 109/175 (62.29%), Postives = 126/175 (72.00%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN+  P IVS  WD+ VKVWNL+NCKL+    GHTGY+NTV VSPDGSLCASGGKDG  +LWDL EGK LY+LD G +I+ALCFSPNRYWLCAAT  SIKIWDLE K IV++LK ++                      CTSL WS DG TLF+GYTD ++RVW +
Sbjct:  149 EWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPP-----------QCTSLAWSADGQTLFAGYTDNLVRVWQV 312
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_HYDAT (Guanine nucleotide-binding protein subunit beta-like protein OS=Hydra attenuata GN=RACK1 PE=2 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.497e-59
Identity = 110/177 (62.15%), Postives = 124/177 (70.06%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGIGR 533
            EWVSCVRFSPNT  P IVS  WD+ VKVWNL+NCKL+    GHTGY+N V VSPDGSLCASGGKDG  +LWDL EGK LY+LD G VI+ALCFSPNRYWLCAAT   IKIWDLE KS+V++LK  +                      C SL WS DG TLF+GYTD +IRVW + R
Sbjct:  149 EWVSCVRFSPNTQNPIIVSCGWDKMVKVWNLTNCKLKTNHFGHTGYLNAVTVSPDGSLCASGGKDGNAMLWDLNEGKHLYTLDGGNVINALCFSPNRYWLCAATGPMIKIWDLEMKSVVDELKPGVIGISTKSRAAD-----------CISLAWSADGQTLFAGYTDNLIRVWQVTR 314
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_BIOGL (Guanine nucleotide-binding protein subunit beta-2-like 1 OS=Biomphalaria glabrata PE=2 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.323e-57
Identity = 107/176 (60.80%), Postives = 123/176 (69.89%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLD-AGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            +W SCVRFSPNT  P IVS+ WDR VKVWNL+NCKL+    GHTGYVNTV VSPDGSLCASGGKD   +LWDL EGK LY+LD AG  I+ALCFSPNRYWLC A+  SIKIWDLE K +V++LK ++                      C SL WS DG TLF+GYTD +IRVW +
Sbjct:  149 DWTSCVRFSPNTQNPIIVSSGWDRLVKVWNLTNCKLKTNHYGHTGYVNTVTVSPDGSLCASGGKDSQAMLWDLNEGKHLYTLDGAGDTINALCFSPNRYWLCVASGPSIKIWDLEGKVVVDELKPEVMGTTSKAPT-------------CLSLAWSADGQTLFAGYTDKLIRVWQV 311
[Close]
BLAST of CF417404 vs. ExPASy Swiss-Prot
Match: GBLP_NEUCR (Guanine nucleotide-binding protein subunit beta-like protein OS=Neurospora crassa GN=cpc-2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 2.921e-55
Identity = 103/175 (58.86%), Postives = 118/175 (67.43%), Query Frame = 3 
Query:    3 EWVSCVRFSPNTLQPTIVSASWDRTVKVWNLSNCKLRATLAGHTGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKRLYSLDAGAVIHALCFSPNRYWLCAATEQSIKIWDLESKSIVEDLKVDLXXXXXXXXXXXXXXXXXXXNIYCTSLNWSVDGSTLFSGYTDGVIRVWGI 527
            EWVSCVRFSPN   P IVS+ WD+ VKVW LS+CKL+    GHTGY+N V +SPDGSLCASGGKDG  +LWDL E K LYSL+A   IHAL FSPNRYWLCAAT  SI I+DLE KS V++LK +                       C SL WS DG TLF+GYTD +IR WG+
Sbjct:  149 EWVSCVRFSPNPQNPVIVSSGWDKLVKVWELSSCKLQTDHIGHTGYINAVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALVFSPNRYWLCAATSSSIIIFDLEKKSKVDELKPEFQNIGKKSREPE-----------CVSLAWSADGQTLFAGYTDNIIRAWGV 312
The following BLAST results are available for this feature:
BLAST of CF417404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
GBLP_ORENI1.768e-6062.86Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MOUSE1.768e-6062.29Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_MACFA1.768e-6062.29Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HUMAN1.768e-6062.29Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_DANRE1.768e-6062.86Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_CHICK1.768e-6062.29Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_BOVIN1.768e-6062.29Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_HYDAT1.497e-5962.15Guanine nucleotide-binding protein subunit beta-li... [more]
GBLP_BIOGL5.323e-5760.80Guanine nucleotide-binding protein subunit beta-2-... [more]
GBLP_NEUCR2.921e-5558.86Guanine nucleotide-binding protein subunit beta-li... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-334 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H01 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417404 ID=CF417404; Name=CF417404; organism=Citrus sinensis; type=EST; length=664bp
CTGAGTGGGTTTCTTGTGTTAGGTTCAGCCCCAACACGCTTCAGCCCACT
ATCGTTTCCGCCTCGTGGGACCGTACGGTCAAAGTGTGGAATTTGAGCAA
CTGCAAGCTTAGGGCTACTCTTGCCGGGCACACTGGATACGTGAACACCG
TCGCAGTGTCGCCGGATGGTTCGTTGTGTGCCAGTGGAGGGAAAGATGGT
GTGATTCTGTTGTGGGATTTGGCTGAGGGAAAAAGACTCTACTCGCTCGA
CGCTGGTGCTGTCATTCACGCGCTCTGCTTCAGTCCTAATAGGTATTGGT
TGTGTGCGGCGACTGAGCAGAGTATAAAGATCTGGGATTTGGAGAGCAAG
AGCATTGTCGAGGATCTTAAGGTTGATCTTAAGACCGAGGCCGAGAAATC
TGAGGCCACCACCGCCACCACCACCATAAAAAAGAAGAACATTTACTGCA
CAAGCTTGAACTGGAGTGTTGATGGAAGCACCTTGTTCAGTGGTTATACA
GATGGTGTGATCAGAGTCTGGGGTATTGGCCGTTATTGAAAACTGCTTGA
GTAATTGCAAACTGCTGTTCTTTTTCGATTACAAACTAGTTTCTCGACTT
TGTAGGCAGTTTCAGACCTATTTAAGATTTAAGATTTTGTTCAAAATGTT
TTTAAGGATATTTT
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