CF417406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417406 vs. ExPASy Swiss-Prot
Match: IF3_HYPNA (Translation initiation factor IF-3 OS=Hyphomonas neptunium (strain ATCC 15444) GN=infC PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 34/96 (35.42%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 1 KKSAANRM----DLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVP 273 KK+AA + +LKE+K+ NID HDY V+ +A +F ++GDKVK+ + +GRE +++ +EL+ + + D E A +E K + + ++L P Sbjct: 84 KKAAARKKQKSSELKEIKIRPNIDTHDYEVKARAIARFFEEGDKVKITLRFRGREMAHQHLGMELLEKVKKDFEETAKVELEPKLEGKQMTMVLAP 179
BLAST of CF417406 vs. ExPASy Swiss-Prot
Match: IF3_CLOPE (Translation initiation factor IF-3 OS=Clostridium perfringens GN=infC PE=3 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 31/88 (35.23%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 22 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGEL-AIEENKKFRDRNIFIILVPNKA 282 + +KE+++ I++HD ++ K A+KFL+ GDKVK+ V +GRE E ++ ++++ F + E+ ++E+ K RN+ +IL P KA Sbjct: 90 ISVKEIRVSPTIEKHDLEIKAKNAKKFLEAGDKVKITVRFRGREAEHSHVGVKILDSFLAQLEEVCSVEKPAKLEGRNMIMILAPKKA 177
BLAST of CF417406 vs. ExPASy Swiss-Prot
Match: IF3_METRJ (Translation initiation factor IF-3 OS=Methylobacterium radiotolerans (strain ATCC 27329 / DSM 1819 / JCM 2831) GN=infC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 29/85 (34.12%), Postives = 54/85 (63.53%), Query Frame = 1 Query: 22 MDLKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELA-IEENKKFRDRNIFIILVP 273 +++KE+K+ ID+HDY ++K+ +F ++GDKVKV + +GRE ++I + L+ R +++ E+A +E R + +IL P Sbjct: 88 VEVKEIKLRPGIDKHDYDTKMKSVHRFFEEGDKVKVTLRFRGREMAHQDIGLRLLERVKSETAEIAKVESEPMLEGRQMIMILAP 172
BLAST of CF417406 vs. ExPASy Swiss-Prot
Match: IF3C_CYACA (Translation initiation factor IF-3, chloroplastic OS=Cyanidium caldarium GN=infC PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 33/83 (39.76%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 28 LKELKMGYNIDQHDYSVRLKAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELAIEENKKFRD-RNIFIILVP 273 +KE+KM Y I++HDY RL A KFLK G+KVKV + KGRE + ++ L+ R D+ ++A + ++D + + +IL P Sbjct: 97 VKEVKMTYKINEHDYETRLNQAFKFLKSGNKVKVTLTFKGREIQHLSLGTMLLNRLMTDLQQIAEVKRSPYQDGKTMILILTP 179 The following BLAST results are available for this feature:
BLAST of CF417406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 64
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417406 ID=CF417406; Name=CF417406; organism=Citrus sinensis; type=EST; length=714bpback to top |