CF417408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_THEMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Thermotoga maritima GN=gap PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 1 Query: 439 RSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 + I+V + +P LPW DLG+D VIE TGVF +RE A H+QAGAKKV+ITAP KG+ T V+G N D KP+ IIS ASCTTN + Sbjct: 71 KEIKVFAEPDPSKLPWKDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAKGEDITVVIGCNEDQLKPEHTIISCASCTTNSI 157
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3PA_SINAL (Glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic (Fragment) OS=Sinapis alba GN=GAPA PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 48/55 (87.27%), Postives = 51/55 (92.73%), Query Frame = 1 Query: 535 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNA+ Y ++ IISNASCTTNCL Sbjct: 1 DREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNAELYSHEDTIISNASCTTNCL 55
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P1_ANASP (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Anabaena sp. (strain PCC 7120) GN=gap1 PE=1 SV=3) HSP 1 Score: 102.064 bits (253), Expect = 3.094e-21 Identity = 51/88 (57.95%), Postives = 63/88 (71.59%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD--IPTYVVGVNADAYKPDEP-IISNASCTTNCL 699 I VS RNP LPWG LG D V+E TG+F D EGA KH+QAGA++V+I+AP K + T +VGVN D + P + I+SNASCTTNCL Sbjct: 73 IPCVSVRNPAELPWGKLGADYVVESTGLFTDSEGASKHLQAGARRVIISAPTKDPDRVRTLLVGVNHDLFDPSKDLIVSNASCTTNCL 160
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_SCHMA (Glyceraldehyde-3-phosphate dehydrogenase OS=Schistosoma mansoni PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.306e-21 Identity = 42/86 (48.84%), Postives = 56/86 (65.12%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAG-AKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 I V R+P N+PW G + V+E TGVF + A HI+ AKKV+I+AP D P +VVGVN ++Y+ ++SNASCTTNCL Sbjct: 74 ISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKVIISAPS-ADAPMFVVGVNENSYEKSMSVVSNASCTTNCL 158 HSP 2 Score: 40.0466 bits (92), Expect = 3.306e-21 Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 3 Query: 222 AKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVKPVGTDGISVDGKV 443 ++ KV INGFGRIGR LR + ++VV++ND ++ +++K DST G F +V + V+GK+ Sbjct: 2 SRAKVGINGFGRIGRLVLRA--AFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFPGEVS-TENGKLKVNGKL 73
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_BOLED (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Boletus edulis GN=GPD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.041e-21 Identity = 47/91 (51.65%), Postives = 62/91 (68.13%), Query Frame = 1 Query: 427 LLMARSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 ++ ++I V + R+P N+PWG +G V+E TGVF E A H++ GAKKV+I+AP D P +V GVN DAY P +ISNASCTTNCL Sbjct: 46 VINGKAITVFAERDPANIPWGTVGAQYVVESTGVFTTIEKASAHLKGGAKKVIISAP-SSDAPMFVCGVNLDAYDPKHTVISNASCTTNCL 135
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P1_KLUMA (Glyceraldehyde-3-phosphate dehydrogenase 1 OS=Kluyveromyces marxianus GN=GAP1 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 6.894e-21 Identity = 48/91 (52.75%), Postives = 63/91 (69.23%), Query Frame = 1 Query: 427 LLMARSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 ++ + + V ++P LPWG LG+D+ ++ TGVF + + A KHI AGAKKV+ITAP K P +VVGVN D Y E I+SNASCTTNCL Sbjct: 66 IINGKKVAVFQEKDPATLPWGKLGVDIAVDSTGVFKELDSAQKHIDAGAKKVVITAPSK-TAPMFVVGVNEDKYN-GEKIVSNASCTTNCL 154
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3PT_HUMAN (Glyceraldehyde-3-phosphate dehydrogenase, testis-specific OS=Homo sapiens GN=GAPDHS PE=1 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 7.246e-21 Identity = 40/86 (46.51%), Postives = 55/86 (63.95%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCL 699 I V + P +PW +G V+E TGV++ + A HI AGA++V+I+AP D P +V+GVN + Y P I+SNASCTTNCL Sbjct: 145 ISVYQCKEPKQIPWRAVGSPYVVESTGVYLSIQAASDHISAGAQRVVISAPSP-DAPMFVMGVNENDYNPGSMNIVSNASCTTNCL 229 HSP 2 Score: 41.2022 bits (95), Expect = 7.246e-21 Identity = 26/68 (38.24%), Postives = 39/68 (57.35%), Query Frame = 3 Query: 204 RKVAAQAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVVAINDTG-GVKQASHLLKYDSTLGIFEADVK 404 + V+ +L V INGFGRIGR LR + ++VVA+ND + ++ KYDST G ++ V+ Sbjct: 68 KMVSVARELTVGINGFGRIGRLVLRAC---MEKGVKVVAVNDPFIDPEYMVYMFKYDSTHGRYKGSVE 132
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3PP_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, plasmid OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGP PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCL 699 I+V++ RNP LPWG+LG+D+V+E TG+F +E A H++ GAKKV+I+APG D+ T V GVN K + +ISNASCTTNCL Sbjct: 75 IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLKGGAKKVIISAPGGKDVDATIVYGVNHGVLKATDTVISNASCTTNCL 160
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3PC_RALEH (Glyceraldehyde-3-phosphate dehydrogenase, chromosomal OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=cbbGC PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 47/86 (54.65%), Postives = 63/86 (73.26%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCL 699 I+V++ RNP LPWG+LG+D+V+E TG+F +E A H++ GAKKV+I+APG D+ T V GVN K + +ISNASCTTNCL Sbjct: 75 IRVLAQRNPAELPWGELGVDVVMECTGLFTSKEKASAHLRGGAKKVIISAPGGKDVDATIVYGVNHGVLKATDTVISNASCTTNCL 160
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P2_AGABI (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Agaricus bisporus GN=gpd2 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.003e-21 Identity = 47/87 (54.02%), Postives = 60/87 (68.97%), Query Frame = 1 Query: 439 RSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 R ++V + R+P +PWG +G D V+E TGVF + A H++ GAKKV+I+AP D P YV GVN D Y P + IISNASCTTNCL Sbjct: 70 RPMKVFAERDPAAIPWGSVGADYVVESTGVFTTIDKASAHLKGGAKKVVISAP-SADAPMYVCGVNLDKYNPKDTIISNASCTTNCL 155 The following BLAST results are available for this feature:
BLAST of CF417408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417408 ID=CF417408; Name=CF417408; organism=Citrus sinensis; type=EST; length=701bpback to top |