CF417408
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3PT_DANRE (Glyceraldehyde 3-phosphate dehydrogenase, testis-specific OS=Danio rerio GN=gapdhs PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.317e-18 Identity = 45/88 (51.14%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 439 RSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDE-PIISNASCTTNCL 699 ++I V P +PWGD G V+E TGVF+ E A HIQ GAK+V+++AP D P +V+GVN D Y P I+SNASCTTNCL Sbjct: 71 QAISVFQCMKPAEIPWGDAGALYVVESTGVFLSIEKASAHIQGGAKRVVVSAPSP-DAPMFVMGVNQDKYDPSSMTIVSNASCTTNCL 157
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: E4PD_PSEHT (D-erythrose-4-phosphate dehydrogenase OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=epd PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 2.711e-17 Identity = 43/87 (49.43%), Postives = 56/87 (64.37%), Query Frame = 1 Query: 442 SIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCL 699 +I + NP LPW LG+D+V+E TGV+ RE A H+ AGAKKVL + P D+ T V G+N D KP+ I+SN SCTTNC+ Sbjct: 74 AIALFCEPNPAELPWKTLGVDVVLECTGVYHSREHAQLHLTAGAKKVLFSHPADNDVDATIVYGINDDELKPEHTIVSNGSCTTNCV 160
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_PLESA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pleurotus sajor-caju GN=GPD PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.997e-16 Identity = 40/91 (43.96%), Postives = 59/91 (64.84%), Query Frame = 1 Query: 427 LLMARSIQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 ++ + I + + ++P N+PWG +G D V+E TGVF + A H++ G +KV+I+AP D P +V GVN + Y P +ISNAS TTNCL Sbjct: 66 IVEGKPIHIFAEKDPANIPWGSVGADYVVESTGVFTTIDKASAHLK-GGEKVVISAP-SADAPMFVCGVNLETYDPKYKVISNASSTTNCL 154
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_HELPY (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori GN=gapA PE=3 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 3.454e-16 Identity = 31/73 (42.47%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 496 GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-----IPTYVVGVNADAYKPDEPIISNASCTTNCL 699 G+D++IE +G F++ + ++ GAKKVL++AP G+ PT V GVN Y+ ++ I+SNASCTTN + Sbjct: 85 GVDVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFCYQ-NQAIVSNASCTTNAI 156 HSP 2 Score: 47.3654 bits (111), Expect = 3.454e-16 Identity = 26/61 (42.62%), Postives = 38/61 (62.30%), Query Frame = 3 Query: 228 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 404 +K+ INGFGRIGR LR R D+ LEV+ IND + ++LL++DS G+ +V+ Sbjct: 1 MKIFINGFGRIGRCVLRAILERNDTNPKLEVIGINDPANWEILAYLLEHDSVHGLLPKEVR 61
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_HELPJ (Glyceraldehyde-3-phosphate dehydrogenase OS=Helicobacter pylori J99 GN=gapA PE=3 SV=1) HSP 1 Score: 54.6842 bits (130), Expect = 5.836e-16 Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 1 Query: 496 GIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGD-----IPTYVVGVNADAYKPDEPIISNASCTTNCL 699 G+ ++IE +G F++ + ++ GAKKVL++AP G+ PT V GVN Y+ ++ I+SNASCTTN + Sbjct: 85 GVGVIIECSGKFLEPKTLENYLLLGAKKVLLSAPFMGEYDEKQYPTLVYGVNHFLYQ-NQAIVSNASCTTNAI 156 HSP 2 Score: 49.6766 bits (117), Expect = 5.836e-16 Identity = 27/61 (44.26%), Postives = 39/61 (63.93%), Query Frame = 3 Query: 228 LKVAINGFGRIGRNFLRCWHGRKDS--PLEVVAINDTGGVKQASHLLKYDSTLGIFEADVK 404 +K+ INGFGRIGR LR R D+ LEV+ IND + ++LL++DST G+ +V+ Sbjct: 1 MKIFINGFGRIGRCVLRAILERNDTNPQLEVIGINDPANWEILAYLLEHDSTHGLLNKEVR 61
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: E4PD_YERE8 (D-erythrose-4-phosphate dehydrogenase OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=epd PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.785e-14 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 1 Query: 445 IQVVSNRNPVNLPWGDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDI-PTYVVGVNADAYKPDEPIISNASCTTNCL 699 I+++ LPWG+LGID+V++ +GV+ R H+ +GAKKVL PG D+ T V GVN + D I+SNASCTTNC+ Sbjct: 75 IRLIHQPEIEQLPWGELGIDVVLDCSGVYGSRADGEAHLTSGAKKVLFAHPGGHDLDATVVYGVNHQDLQADHRIVSNASCTTNCI 160
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_MELGA (Glyceraldehyde-3-phosphate dehydrogenase (Fragment) OS=Meleagris gallopavo GN=GAPDH PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.479e-12 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1 Query: 502 DLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 + V+E TGVF E AG H++ GAK+V+I+AP D P +V+GVN + Y I+SNA CTTNCL Sbjct: 2 EYVVESTGVFTTMEKAGAHLKGGAKRVIISAPS-ADAPMFVMGVNHEKYDKSLKIVSNALCTTNCL 66
BLAST of CF417408 vs. ExPASy Swiss-Prot
Match: G3P_LACDE (Glyceraldehyde-3-phosphate dehydrogenase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=gap PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.303e-11 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 439 RSIQVVSNRNPVNLPW-GDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVVGVNADAYKPDEPIISNASCTTNCL 699 + +V + N+PW + G+D V+E TG + + + H+ AGAK+VLI+AP D+ T V VN D D+ I+S SCTTN L Sbjct: 74 KKYRVYAEPQAQNIPWVKNDGVDFVLECTGFYTSKAKSQAHLDAGAKRVLISAPAGNDLKTIVYSVNQDTLTADDTIVSAGSCTTNSL 161 The following BLAST results are available for this feature:
BLAST of CF417408 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 348
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417408 ID=CF417408; Name=CF417408; organism=Citrus sinensis; type=EST; length=701bpback to top |