CF417412

Overview
NameCF417412
Unique NameCF417412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C93A1_SOYBN (Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 3.226e-17
Identity = 35/95 (36.84%), Postives = 49/95 (51.58%), Query Frame = 2
Query:   44 ISCILWLLFTWV-WVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            I  +  ++F ++ W K  K        LPP P   PIIG+L  +   PH+    L+  HGPIM L +G V  VV S+A  AK+ L+ H+    NR
Sbjct:    8 ICLVSTIVFAYILWRKQSKK------NLPPSPKALPIIGHLHLVSPIPHQDFYKLSTRHGPIMQLFLGSVPCVVASTAEAAKEFLKTHEINFSNR 96          

HSP 2 Score: 49.6766 bits (117), Expect = 3.226e-17
Identity = 30/113 (26.55%), Postives = 53/113 (46.90%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            P    WK ++K+C   + + + +D    +R+++ ++ ++ V     AGEA+D G      + N++S    S   ++ N   A E K          GK NVSDF   L+  D+
Sbjct:  119 PFGPYWKFMKKLCMSELLSGRMMDQFLPVRQQETKRFISRVFRKGVAGEAVDFGDELMTLSNNIVSRMTLSQKTSE-NDNQAEEMKKLVSNIAELMGKFNVSDFIWYLKPFDL 230          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.227e-17
Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIK-LPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            +S  L++ F ++  K  K  +    K LPPGP   P IG +  L G  PH+ L DLA+ +GP+M L++G+V+ VV++S  MAKQVL+ HD A  +R
Sbjct:    4 VSIFLFISFLFLLRKWKKYLNNSQTKKLPPGPWKLPFIGGMHHLAGGLPHRVLRDLAEKYGPLMHLQLGEVSAVVVTSPEMAKQVLKTHDIAFASR 99          

HSP 2 Score: 33.4982 bits (75), Expect = 3.227e-17
Identity = 12/56 (21.43%), Postives = 32/56 (57.14%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAID 539
            I + P    W+++RKIC + + +++ + +   +R  ++ +L+  +Q    +GE ++
Sbjct:  115 IAFSPYGDYWRQMRKICIMEVLSAKSVRSFSSIRHDEVVRLIDSIQPCFTSGELVN 170          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.702e-17
Identity = 51/110 (46.36%), Postives = 64/110 (58.18%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDS--VSSHQKGGI 367
            IS IL+LLF           S G   LPPGP PWPI+GNL QLG KPH   A+LA+ +G I +LK+G  T VV S++S A ++L+ HD  L  R V  S  V  H +  I
Sbjct:   13 ISSILYLLFG----------SSGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSI 112          

HSP 2 Score: 81.6481 bits (200), Expect = 4.525e-15
Identity = 46/145 (31.72%), Postives = 76/145 (52.41%), Query Frame = 3
Query:  297 KIMTQLYAIETFQIL*VPTRRVEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFS---VDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            +I++  Y  ++F++       VE  I W   +  WK LRK+C   +FT + +++   +R KK +++V ++ +    GE + I +  F T VN+  N IFS    +L  PNS S+ EFK      +      N +D+FPML K D+
Sbjct:   91 RILSARYVFQSFRV----KGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKK--QGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGXPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDL 228          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AC_ARATH (Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=CYP71A12 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.196e-17
Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = 2
Query:   29 EMQSWISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGG 364
            EM   +S  L  L T   +K     +   + LPP P   P+IGNL QL   PH+SL  L+  +GP+M L  G+V  +V+SS   A++VL+ HD    NR    +V     GG
Sbjct:    2 EMILMVSLCLTTLITLFLLKQFLKRTANKVNLPPSPWRLPLIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDLKFANRPRSKAVHGLMNGG 113          

HSP 2 Score: 33.4982 bits (75), Expect = 4.196e-17
Identity = 20/114 (17.54%), Postives = 57/114 (50.00%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNS--ASAREFKN*CGXXMVESGKPNVSDFFPMLRKLD 719
            P    W++++ +C L++ T++ + + + +R +++ +++  ++++  +  + ++     +  V L S+    + L   +S   +AR+ K      M   G+  + D+ P L  +D
Sbjct:  120 PYGEYWRQMKSVCILNLLTNKMVASFEKIREEELNEMIKKLEKASSSSSSENLS----ELFVTLPSDVTSRIALGRKHSEDETARDLKKRVRQIMELLGEFPIGDYVPALAWID 229          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71A9_SOYBN (Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=2 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.454e-17
Identity = 42/91 (46.15%), Postives = 59/91 (64.84%), Query Frame = 2
Query:   56 LWLLFTWVWVKALKSFSRGSIKL-PPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            L LLFT   VK L+  +    +L PPGP   P IGNL QLG  PH+SL  L+  HGP+M L++G + T+V+SSA MA+++ ++HD+    R
Sbjct:   10 LTLLFTLSLVKQLRKPTAEKRRLLPPGPRKLPFIGNLHQLGTLPHQSLQYLSNKHGPLMFLQLGSIPTLVVSSAEMAREIFKNHDSVFSGR 100          

HSP 2 Score: 26.5646 bits (57), Expect = 5.454e-17
Identity = 22/118 (18.64%), Postives = 56/118 (47.46%), Query Frame = 3
Query:  357 RVEYG--IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPM 704
            R+ YG  + + P    W+++RKI  L + + +++ + + +R ++++ L+  +  S H    +       +  ++L +N +  + L   N + A +        M++  +  +  FFP+
Sbjct:  108 RLGYGSTVSFAPYGEYWREMRKIMILELLSPKRVQSFEAVRFEEVKLLLQTIALS-HGPVNLS------ELTLSLTNNIVCRIALGKRNRSGADDANK--VSEMLKETQAMLGGFFPV 216          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 7.086e-17
Identity = 38/105 (36.19%), Postives = 60/105 (57.14%), Query Frame = 2
Query:   59 WLLFTWVWVKALKSFS---RGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGG 364
            W L     + A+ S+    R   K PPGP+P PI+GNL  +     +   + A+ +GPI+S+ IG +  VV+SSA +AK+VL++HD  L +R+   S  +  + G
Sbjct:    3 WFLIAVATIAAVVSYKLIQRLRYKFPPGPSPKPIVGNLYDIKPVRFRCYYEWAQSYGPIISVWIGSILNVVVSSAELAKEVLKEHDQKLADRHRNRSTEAFSRNG 107          

HSP 2 Score: 35.8094 bits (81), Expect = 7.086e-17
Identity = 14/51 (27.45%), Postives = 28/51 (54.90%), Query Frame = 3
Query:  378 WLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGE 530
            W      + K+RK+C L +FT ++L++ + +R  ++  +V  V   C+  E
Sbjct:  112 WADYGPHYVKVRKVCTLELFTPKRLESLRPIREDEVTAMVESVFRDCNLPE 162          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.077e-16
Identity = 50/110 (45.45%), Postives = 63/110 (57.27%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDS--VSSHQKGGI 367
            IS IL+LLF             G   LPPGP PWPI+GNL QLG KPH   A+LA+ +G I +LK+G  T VV S++S A ++L+ HD  L  R V  S  V  H +  I
Sbjct:   12 ISSILYLLFG----------GSGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVKGHVENSI 111          

HSP 2 Score: 84.3445 bits (207), Expect = 6.981e-16
Identity = 47/145 (32.41%), Postives = 77/145 (53.10%), Query Frame = 3
Query:  297 KIMTQLYAIETFQIL*VPTRRVEYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFS---VDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            +I++  Y  ++F++       VE  I W   +  WK LRK+C   +FT + +++   +R KK +++V ++ +    GE + I +  F T VN+  N IFS    +L DPNS S+ EFK      +      N +D+FPML K D+
Sbjct:   90 RILSARYVFQSFRV----KGHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMKK--QGEEVKIVEVIFGTLVNIFGNLIFSQNIFELGDPNSGSS-EFKEYLWRMLELGNSTNPADYFPMLGKFDL 227          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AD_ARATH (Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=CYP71A13 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.198e-16
Identity = 44/119 (36.97%), Postives = 61/119 (51.26%), Query Frame = 2
Query:   29 EMQSWISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGGIRDPMAP 385
            EM   IS  L  L T + ++     +   + LPP P   P+IGNL QL   PH+SL  L+  +GP+M L  G+V  +V+SS   A++VL+ HD    NR    +V     GG     AP
Sbjct:    2 EMILSISLCLTTLITLLLLRRFLKRTATKVNLPPSPWRLPVIGNLHQLSLHPHRSLRSLSLRYGPLMLLHFGRVPILVVSSGEAAQEVLKTHDHKFANRPRSKAVHGLMNGGRDVVFAP 120          

HSP 2 Score: 32.7278 bits (73), Expect = 1.198e-16
Identity = 19/118 (16.10%), Postives = 59/118 (50.00%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNS--ASAREFKN*CGXXMVESGKPNVSDFFPMLRKLD 719
            + + P    W++++ +C L++ T++ +++ + +R  ++  ++  ++++  +  + ++     +  + L S+    V L   +S   +AR+ K      M   G+  + ++ P+L  +D
Sbjct:  116 VVFAPYGEYWRQMKSVCILNLLTNKMVESFEKVREDEVNAMIEKLEKASSSSSSENLS----ELFITLPSDVTSRVALGRKHSEDETARDLKKRVRQIMELLGEFPIGEYVPILAWID 229          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 2.024e-16
Identity = 41/94 (43.62%), Postives = 57/94 (60.64%), Query Frame = 2
Query:   62 LLFTWVWVKALKSFSRGSI-----KLPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            LLF ++  K  K F + S      +LPPGP   PI+GN  QL G   H  L DLAK +GP+M LKIG+V+T+V SS  +A+++ + HD    +R
Sbjct:    1 LLFCFILSKTTKKFGQNSQYSNHDELPPGPPQIPILGNAHQLSGGHTHHILRDLAKKYGPLMHLKIGEVSTIVASSPQIAEEIFRTHDILFADR 94          

HSP 2 Score: 31.5722 bits (70), Expect = 2.024e-16
Identity = 21/113 (18.58%), Postives = 49/113 (43.36%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            P    W++LRKI  + + + + + + + +R +++   +  +      G  I++ +      ++LL   I +       + +  EF            +PN++D FP L+ L +
Sbjct:  115 PYGNYWRQLRKISMMELLSQKSVQSFRSIREEEVLNFIKSI--GSKEGTRINLSK-----EISLLIYGITTRAAFGEKNKNTEEFIRLLDQLTKAVAEPNIADMFPSLKFLQL 220          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.417e-16
Identity = 40/106 (37.74%), Postives = 67/106 (63.21%), Query Frame = 2
Query:   41 WISCILWLLFTWV-WVKALKSFSRGSIKLPPGPTPWPIIGNLPQL-GHKP-HKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSS 349
            +I+ IL++ F +   V+   S +  + KLPPGP   P+IGN+ Q+ G  P H  L +LA  +GP+M LK+G+V+ ++++S  MA+++++ HD    +R  PD V S
Sbjct:   15 FITSILFIFFVFFKLVQRSDSKTSSTCKLPPGPRTLPLIGNIHQIVGSLPVHYYLKNLADKYGPLMHLKLGEVSNIIVTSPEMAQEIMKTHDLNFSDR--PDFVLS 118          

HSP 2 Score: 35.8094 bits (81), Expect = 3.417e-16
Identity = 22/84 (26.19%), Postives = 45/84 (53.57%), Query Frame = 3
Query:  345 VPTRRVEY---GIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNT 587
            V +R V Y   GI +      W++LRKIC + + T++++ + + +R +++ +LV  +     A  A + G + F+   ++ S T
Sbjct:  116 VLSRIVSYNGSGIVFSQHGDYWRQLRKICTVELLTAKRVQSFRSIREEEVAELVKKI-----AATASEEGGSIFNLTQSIYSMT 194          
The following BLAST results are available for this feature:
BLAST of CF417412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C93A1_SOYBN3.226e-1736.84Cytochrome P450 93A1 OS=Glycine max GN=CYP93A1 PE=... [more]
C71D7_SOLCH3.227e-1742.71Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C80B2_ESCCA3.702e-1746.36(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C71AC_ARATH4.196e-1737.50Cytochrome P450 71A12 OS=Arabidopsis thaliana GN=C... [more]
C71A9_SOYBN5.454e-1746.15Cytochrome P450 71A9 OS=Glycine max GN=CYP71A9 PE=... [more]
C98A3_ARATH7.086e-1736.19Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C80B1_ESCCA1.077e-1645.45(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
C71AD_ARATH1.198e-1636.97Cytochrome P450 71A13 OS=Arabidopsis thaliana GN=C... [more]
C71DC_CATRO2.024e-1643.62Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71DA_SOYBN3.417e-1637.74Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-342 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417412 ID=CF417412; Name=CF417412; organism=Citrus sinensis; type=EST; length=723bp
GTTTCCCACAGGGCCAAAAGTAAGATCAGAGATGCAAAGCTGGATAAGCT
GCATACTATGGCTTCTATTCACATGGGTTTGGGTCAAGGCTTTAAAGTCC
TTTTCTAGAGGATCAATAAAGCTTCCACCGGGGCCGACGCCTTGGCCGAT
CATCGGAAACCTCCCGCAACTTGGGCACAAACCTCACAAGTCACTAGCCG
ACCTTGCCAAGGTCCATGGCCCAATCATGAGTCTAAAAATTGGACAGGTG
ACCACAGTAGTCATTTCTTCAGCTTCCATGGCCAAACAAGTCCTTCAAGA
TCATGACGCAGCTTTATGCAATCGAAACGTTCCAGATTCTGTGAGTTCCC
ACCAGAAGGGTGGAATACGGGATCCCATGGCTCCCTGCCTCCACGCAGTG
GAAAAAGCTTCGAAAAATATGCAACCTACATATTTTCACCAGTCAGAAAC
TTGATGCCAATCAAGACCTCCGGCGCAAGAAAATCCAACAACTCGTTGCT
TTTGTTCAAGAAAGTTGCCATGCGGGAGAAGCAATCGATATTGGCCAAGC
AGCTTTCGATACTGCAGTTAATCTATTGTCCAATACGATTTTTTCTGTTG
ATTTGGCTGACCCTAATTCAGCTTCCGCAAGGGAGTTTAAGAATTGATGT
GGGGNTTNGATGGTAGAATCTGGAAAGCCTAACGTGTCCGATTTTTTTCC
TATGCTTAGAAAGCTTGATATAC
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