CF417412

Overview
NameCF417412
Unique NameCF417412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71B5_ARATH (Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CYP71B5 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.444e-16
Identity = 43/106 (40.57%), Postives = 64/106 (60.38%), Query Frame = 2
Query:   32 MQSWISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSS 349
            M  ++  +L L  + +++K L   S+G  KLPPGP   PIIGNL Q G   HKSL  +++ +GP+M L  G V  +++SS   A++VL+ HD   C+R  P +V S
Sbjct:    1 MSIFLCFLLLLPLSLIFLKKLLP-SKG--KLPPGPKGLPIIGNLHQFGRFLHKSLHKISQEYGPVMLLHFGVVPVIIVSSKEGAEEVLKTHDLETCSR--PKTVGS 101          

HSP 2 Score: 32.3426 bits (72), Expect = 4.444e-16
Identity = 19/82 (23.17%), Postives = 40/82 (48.78%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESC--HAGEAIDIGQAAFDTAVNLLSNTIFSVDLAD 611
            I + P    W+++RKI    +F+ +KL + + +R  + Q LV  V +S       ++++ +  F  A +++    F  +  D
Sbjct:  111 IGFAPYGENWREMRKIAVSELFSQKKLKSFRYIREDESQLLVRKVSKSALETPTSSVNLRKVIFTFAASIICRLSFGQNFCD 192          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AL_ARATH (Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=CYP71A21 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.778e-16
Identity = 39/99 (39.39%), Postives = 57/99 (57.58%), Query Frame = 2
Query:   32 MQSWISCILWLLFTWVWVKALKSFSRGS-IKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            M+S    IL  L  ++ +   K   RG     P  P   P+IGNL QLGH PH+SL  L+  +GP+M L +G+V  +V+SSA +A+ +L+ HD    +R
Sbjct:    1 MESMTMIILQSLIIFITILFFKKQKRGKKSNTPRSPPRLPLIGNLHQLGHHPHRSLCSLSHRYGPLMLLHLGRVPVLVVSSADVARDILKTHDRVFASR 99          

HSP 2 Score: 29.261 bits (64), Expect = 5.778e-16
Identity = 19/116 (16.38%), Postives = 52/116 (44.83%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLD 719
            + + P    W++++ +C L + +++ + + +++R+++I  ++  +Q+S          Q      +  L+N + S        +   + K      M+  G+ +V  + P L  +D
Sbjct:  115 VAFAPYGEYWRQIKSVCVLRLLSNKMVTSFRNVRQEEISLMMEKIQKSSSL-------QVNVSELLGSLTNDVISRIALGRKYSGETDSKELMKRLMMLMGEFSVGTYVPWLGWID 223          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 65.4698 bits (158), Expect = 7.502e-16
Identity = 30/82 (36.59%), Postives = 51/82 (62.20%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGG 364
            +LPPGP PWP++GNL Q+     +   + A+ +GP++S+  G   TVV+S++ +AK+VL+++D  L +R    S     + G
Sbjct:   30 RLPPGPRPWPVLGNLRQIKPIRCRCFQEWAERYGPVISVWFGSGLTVVVSTSELAKEVLKENDQQLADRPRNRSTQRFSRNG 111          

HSP 2 Score: 38.5058 bits (88), Expect = 7.502e-16
Identity = 29/120 (24.17%), Postives = 52/120 (43.33%), Query Frame = 3
Query:  378 WLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHA----GEAIDIGQAAFDTAVNLLSNTIFSVDLADPN---SASAREFKN*CGXXMVESGKPNVSDFFPMLRKL 716
            W      + K+RK+CNL +FT ++L+A + +R  ++  +V  V  +  A    G+ + +       A N ++   F     + N       REFK      +      +V++F   LR L
Sbjct:  116 WADYGPHYIKVRKLCNLELFTPKRLEALRPIREDEVTAMVESVYRAATAPGNEGKPMVVRNHLSMVAFNNITRLAFGKRFMNANGDIDEQGREFKTIVNNGIKIGASLSVAEFIWYLRWL 235          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71B2_ARATH (Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CYP71B2 PE=2 SV=2)

HSP 1 Score: 64.6994 bits (156), Expect = 1.647e-15
Identity = 35/86 (40.70%), Postives = 49/86 (56.98%), Query Frame = 2
Query:   92 LKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSS 349
            LK        LPP P+  PIIGNL  L   PH+    L+  +GP++ L++G V  VVISS+  A+ VL+ +D   C+R  P +V S
Sbjct:   21 LKQNKTSKFNLPPSPSSLPIIGNLHHLAGLPHRCFHKLSIKYGPLVFLRLGSVPVVVISSSEAAEAVLKTNDLECCSR--PKTVGS 104          

HSP 2 Score: 38.1206 bits (87), Expect = 1.647e-15
Identity = 18/81 (22.22%), Postives = 44/81 (54.32%), Query Frame = 3
Query:  345 VPTRRVEYG---IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLL 578
            V + ++ YG   I + P    W+++RK+  + +F+S+K+ + + +R +++  +V  V ES      +D+ +  F    +++
Sbjct:  102 VGSGKLSYGFKDITFAPYGEYWREVRKLAVIELFSSKKVQSFRYIREEEVDFVVKKVSESALKQSPVDLSKTFFSLTASII 182          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BZ_ARATH (Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=CYP71B38 PE=2 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 1.648e-15
Identity = 32/69 (46.38%), Postives = 46/69 (66.67%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            KLPPGP   PIIGNL QLG   +KS   +++ +GP++ L++G V  +V+SS   A++VL+ HD   C R
Sbjct:   27 KLPPGPIGLPIIGNLHQLGKLLYKSFHKISQEYGPVVLLRLGVVPVIVVSSKEGAEEVLKTHDLETCTR 95          

HSP 2 Score: 34.6538 bits (78), Expect = 1.648e-15
Identity = 22/112 (19.64%), Postives = 49/112 (43.75%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCH--AGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFP 701
            I + P    W+++RKI  L +F+ +KL + + +R ++ + LV  + +S       ++D+ +  F    +++    F  +    +     + +          G    +DFFP
Sbjct:  111 IGFAPFGDDWREMRKITTLELFSVKKLKSFRYIREEESELLVKKISKSVDETQNSSVDLRKVLFSFTASIICRLAFGQNFHQCDFVDMEKVEELVLESEANLGTFAFADFFP 222          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AO_ARATH (Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=CYP71A24 PE=2 SV=3)

HSP 1 Score: 68.1662 bits (165), Expect = 1.648e-15
Identity = 40/94 (42.55%), Postives = 53/94 (56.38%), Query Frame = 2
Query:   53 ILWLLFTWVWVKAL--KSFSRGS-IKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            I+ LL + + +  L  K  SRG     PP P   P+I NL QLG  PH+SL  L+  +GP+M L  G V  +V+SSA  AK VL+ HD    +R
Sbjct:    7 IILLLCSIILITILFFKKQSRGKKSNAPPSPPRLPLIRNLHQLGRHPHRSLCSLSHRYGPLMLLHFGSVPVLVVSSADAAKDVLKTHDRVFASR 100          

HSP 2 Score: 34.6538 bits (78), Expect = 1.648e-15
Identity = 18/74 (24.32%), Postives = 41/74 (55.41%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDL 605
            P    W++++ +C LH+F+++ + + +D+R+++I  ++    E      ++ I  +  +  VNL +N I  V L
Sbjct:  120 PYGEYWRQMKSVCVLHLFSNKMVRSFRDVRQEEISLMI----EKIRISSSLRINLS--EILVNLTNNVICRVAL 187          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AI_ARATH (Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=CYP71A18 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 2.783e-15
Identity = 41/112 (36.61%), Postives = 59/112 (52.68%), Query Frame = 2
Query:   29 EMQSWISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGG 364
            EM   +S  L  L T + +K     +   + LPP P   P+IGNL QL   PH+SL  L+  +GP+M L  G+V  +V+SS+  A ++L+ HD    NR    +V     GG
Sbjct:    2 EMTLMVSLCLTTLLTLLLLKKFLKRTAKKVNLPPSPWRIPVIGNLHQLSLHPHRSLHSLSLRYGPLMLLHFGRVPILVVSSSEAAHEILKTHDLKFANRPKSKAVHGLMNGG 113          

HSP 2 Score: 26.9498 bits (58), Expect = 2.783e-15
Identity = 7/55 (12.73%), Postives = 33/55 (60.00%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ 548
            P    W++++ +C L++ T++ + + + +R +++  ++  ++++  +  A ++ +
Sbjct:  120 PYGEYWRQMKSVCILNLLTNKMVASFEKVREEEVNAMMEKLEKASCSSSAENLSE 174          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AQ_ARATH (Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=CYP71A26 PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 4.700e-15
Identity = 35/91 (38.46%), Postives = 56/91 (61.54%), Query Frame = 2
Query:   53 ILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            I++++   ++ K  +   R ++  PPG    P+IGNL QLG  PH+SL  L+  +GP+M L  G+V  +V+SSA +A+ VL+ HD    +R
Sbjct:   11 IIFVVTIIIFRKQKRGKKRNTLPSPPG---LPLIGNLHQLGRHPHRSLCSLSHRYGPLMLLHFGRVPVLVVSSAELARDVLKTHDRVFASR 98          

HSP 2 Score: 31.5722 bits (70), Expect = 4.700e-15
Identity = 9/44 (20.45%), Postives = 30/44 (68.18%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQES 515
            P    W++++ +C LH+F+++ + + +++R ++I  ++  +++S
Sbjct:  118 PYGEYWRQMKSVCVLHLFSNKMVRSFREVREEEISLMMEKIRKS 161          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71A4_SOLME (Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71A4 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 6.102e-15
Identity = 39/97 (40.21%), Postives = 56/97 (57.73%), Query Frame = 2
Query:   41 WISC-ILWLLFTWVWVKALKSFSRG-SIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            W S  IL LLF ++ +    + S+  ++ LPP P   PIIGNL QLG  PH+SL  L++ +GP+M L +G    +V SS   A+ +L+ HD     R
Sbjct:    7 WYSLLILLLLFIFLLIHHCFTTSKTQNMFLPPSPRKLPIIGNLHQLGSHPHRSLRKLSQKYGPVMLLHLGSKPVIVASSVDAARDILKTHDHVWATR 103          

HSP 2 Score: 32.3426 bits (72), Expect = 6.102e-15
Identity = 12/55 (21.82%), Postives = 33/55 (60.00%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ 548
            P    W ++R I  LH+ +++++ + +D+R ++   ++  +++ C A   I++G+
Sbjct:  123 PFGEYWWQVRSIVVLHLLSNKRVQSYRDVREEETANMIEKIRQGCDA-SVINLGE 176          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C83A1_ARATH (Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CYP83A1 PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 7.931e-15
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQLGH-KPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            KLPPGP+P P+IGNL QL    P +  A  AK +GPI+S +IG  T VVISSA +AK++L+  D    +R
Sbjct:   29 KLPPGPSPLPVIGNLLQLQKLNPQRFFAGWAKKYGPILSYRIGSRTMVVISSAELAKELLKTQDVNFADR 98          

HSP 2 Score: 31.5722 bits (70), Expect = 7.931e-15
Identity = 22/107 (20.56%), Postives = 48/107 (44.86%), Query Frame = 3
Query:  399 WKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLD 719
            ++++RK+   H+F+  ++   + +R ++ ++++  + ++    E +DI +       +++    F     +      R  K   G   V  GK   SDFFP    LD
Sbjct:  123 YREIRKMGMNHLFSPTRVATFKHVREEEARRMMDKINKAADKSEVVDISELMLTFTNSVVCRQAFGKKYNEDGEEMKRFIKILYGTQSV-LGKIFFSDFFPYCGFLD 228          
The following BLAST results are available for this feature:
BLAST of CF417412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71B5_ARATH4.444e-1640.57Cytochrome P450 71B5 OS=Arabidopsis thaliana GN=CY... [more]
C71AL_ARATH5.778e-1639.39Cytochrome P450 71A21 OS=Arabidopsis thaliana GN=C... [more]
C98A1_SORBI7.502e-1636.59Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71B2_ARATH1.647e-1540.70Cytochrome P450 71B2 OS=Arabidopsis thaliana GN=CY... [more]
C71BZ_ARATH1.648e-1546.38Cytochrome P450 71B38 OS=Arabidopsis thaliana GN=C... [more]
C71AO_ARATH1.648e-1542.55Cytochrome P450 71A24 OS=Arabidopsis thaliana GN=C... [more]
C71AI_ARATH2.783e-1536.61Cytochrome P450 71A18 OS=Arabidopsis thaliana GN=C... [more]
C71AQ_ARATH4.700e-1538.46Cytochrome P450 71A26 OS=Arabidopsis thaliana GN=C... [more]
C71A4_SOLME6.102e-1540.21Cytochrome P450 71A4 OS=Solanum melongena GN=CYP71... [more]
C83A1_ARATH7.931e-1551.43Cytochrome P450 83A1 OS=Arabidopsis thaliana GN=CY... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-342 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417412 ID=CF417412; Name=CF417412; organism=Citrus sinensis; type=EST; length=723bp
GTTTCCCACAGGGCCAAAAGTAAGATCAGAGATGCAAAGCTGGATAAGCT
GCATACTATGGCTTCTATTCACATGGGTTTGGGTCAAGGCTTTAAAGTCC
TTTTCTAGAGGATCAATAAAGCTTCCACCGGGGCCGACGCCTTGGCCGAT
CATCGGAAACCTCCCGCAACTTGGGCACAAACCTCACAAGTCACTAGCCG
ACCTTGCCAAGGTCCATGGCCCAATCATGAGTCTAAAAATTGGACAGGTG
ACCACAGTAGTCATTTCTTCAGCTTCCATGGCCAAACAAGTCCTTCAAGA
TCATGACGCAGCTTTATGCAATCGAAACGTTCCAGATTCTGTGAGTTCCC
ACCAGAAGGGTGGAATACGGGATCCCATGGCTCCCTGCCTCCACGCAGTG
GAAAAAGCTTCGAAAAATATGCAACCTACATATTTTCACCAGTCAGAAAC
TTGATGCCAATCAAGACCTCCGGCGCAAGAAAATCCAACAACTCGTTGCT
TTTGTTCAAGAAAGTTGCCATGCGGGAGAAGCAATCGATATTGGCCAAGC
AGCTTTCGATACTGCAGTTAATCTATTGTCCAATACGATTTTTTCTGTTG
ATTTGGCTGACCCTAATTCAGCTTCCGCAAGGGAGTTTAAGAATTGATGT
GGGGNTTNGATGGTAGAATCTGGAAAGCCTAACGTGTCCGATTTTTTTCC
TATGCTTAGAAAGCTTGATATAC
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