CF417412

Overview
NameCF417412
Unique NameCF417412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AJ_ARATH (Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=CYP71A19 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.087e-13
Identity = 37/112 (33.04%), Postives = 57/112 (50.89%), Query Frame = 2
Query:   50 CILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGGIRDPMAP 385
            C+  LL   +    LK  +  ++ LPP P   P+IGNL QL    H+SL  L+  +GP+M L  G+   +++SSA +A  +L+ +D    NR     +    +GG     AP
Sbjct:    9 CLTTLLALLLLKSILKRTTTNNLNLPPSPWRLPVIGNLHQLSLNTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDILKTYDVICANRPKTKVIDKILRGGRDVAFAP 120          

HSP 2 Score: 27.7202 bits (60), Expect = 1.087e-13
Identity = 11/61 (18.03%), Postives = 33/61 (54.10%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQ--ESCHAGEAIDIGQ 548
            + + P    WK+++ IC  ++ +++ + + + +R  +I+ ++  V+   SC     +++ Q
Sbjct:  116 VAFAPYGEYWKQMKSICIQNLLSNKMVRSYKKIREDEIKLMIEKVENASSCSPPSPVNLSQ 176          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BD_ARATH (Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=CYP71B13 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13
Identity = 45/128 (35.16%), Postives = 70/128 (54.69%), Query Frame = 2
Query:   32 MQSWISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR---NVPDSVSSHQKGGIRDPMAPCLHAVEK 406
            M  W   ++++ F  +++   K+  +    LPPGP   PIIGNL QLG KPH+S+  L++ +GP++ LK+G+V +VV S+    K VL+  D   C+R     P  +S + K     P +    AV K
Sbjct:    1 MSLWYIIVVFVFFASIFIA--KNTRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSEKYGPLVYLKLGKVPSVVASTPETVKDVLKTFDKDCCSRAFLTYPARISYNLKDLAFAPYSKYWKAVRK 126          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AE_ARATH (Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=CYP71A14 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 1.411e-13
Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 2
Query:   50 CILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            C+  +L   +  + L       + LPP P   P+IGNL QL   PH+SL  L+  +GP+M L  G+V  +V+SS+ +A  +++ HD  + NR
Sbjct:    9 CLATILALLLLKQFLNRTYTAKVNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPVLVVSSSDVAHDLMKTHDLKVANR 100          

HSP 2 Score: 28.8758 bits (63), Expect = 1.411e-13
Identity = 7/55 (12.73%), Postives = 32/55 (58.18%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQ 548
            P    W++++ +C +++   +K+ + + +R ++I +++  V+++      +++ +
Sbjct:  120 PYGEYWRQIKSVCIVNLLNKKKVQSFEKVREEEISEMMERVEKASSDSSPLNLSE 174          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71B6_ARATH (Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CYP71B6 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.901e-13
Identity = 37/89 (41.57%), Postives = 54/89 (60.67%), Query Frame = 2
Query:   59 WLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            WLL   +    +    R    LPPGP   PI+GN+ QLG  PH+SL DL+  +GP++++ +G V TVV+ S   A++VL+ HD+  C R
Sbjct:   15 WLLLLLIPPLLIFFLLRSPKNLPPGPPRLPILGNIHQLGSLPHRSLRDLSLKYGPVITVYLGSVRTVVVHSPETAEEVLKLHDSECCTR 103          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BT_ARATH (Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=CYP71B29 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 2.382e-13
Identity = 34/78 (43.59%), Postives = 44/78 (56.41%), Query Frame = 2
Query:   92 LKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            LK       KLPPGP   P IGNL QL   P ++L      +GP++ L+ G V  VVISS   A++VL+ HD   C+R
Sbjct:   18 LKKLKHSKWKLPPGPPKLPFIGNLHQLQELPPRNLNHK---YGPVILLRFGFVPLVVISSKEAAEEVLKIHDLECCSR 92          

HSP 2 Score: 34.6538 bits (78), Expect = 2.382e-13
Identity = 24/120 (20.00%), Postives = 50/120 (41.67%), Query Frame = 3
Query:  351 TRRVEYG---IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFP 701
            TR++ Y    I + P   +WK +RK+  + +FT++K    + +R ++   LV  + E       +++ +  F    +++    F  +L +          +      +       SDFFP
Sbjct:   98 TRKISYNFKDIGFAPYGEEWKAMRKLSVVELFTAKKHQYFRSIREEENDLLVKKLTELALTRSPVNLKKTLFTLVGSIVCRIGFGFNLHECEFIDENSISDLVDKSEILEMTSMFSDFFP 217          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.092e-13
Identity = 28/69 (40.58%), Postives = 44/69 (63.77%), Query Frame = 2
Query:  122 LPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            LPPGP   P+IG+L  L G  P  +LA +AK +GP+  +++G+V +VV+SS    K+ ++  D A  +R
Sbjct:   35 LPPGPPKLPLIGHLHLLWGKLPQHALASVAKQYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACADR 103          

HSP 2 Score: 40.817 bits (94), Expect = 3.092e-13
Identity = 17/76 (22.37%), Postives = 41/76 (53.95%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLAD 611
            P S  W+++RKIC   + +++ + +   +R+ ++ +L+  ++ S  AGEA+D+ +       +++    F   + D
Sbjct:  123 PYSVHWRQMRKICVSELLSARNVRSFGFIRQDEVSRLLGHLRSSAAAGEAVDLTERIATLTCSIICRAAFGSVIRD 198          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71B8_ARATH (Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CYP71B8 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13
Identity = 39/69 (56.52%), Postives = 44/69 (63.77%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            KLPPGPT  PIIGNL QLG   H S   L+  HGP+M L+ G V  VVISS   AKQVL+  D   C+R
Sbjct:   29 KLPPGPTGLPIIGNLHQLGRLLHSSFHKLSLEHGPVMLLRFGVVPMVVISSKEAAKQVLKSRDLETCSR 97          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C99A1_SORBI (Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bicolor GN=CYP99A1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 4.012e-13
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQLG-HKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            K PPGP   P+IGNL  L   +PH +L DLA  HGP+M L++GQV  VVISS + A++VL+D D    +R
Sbjct:   26 KRPPGPWRLPLIGNLLHLATSQPHVALRDLAMKHGPVMYLRLGQVDAVVISSPAAAQEVLRDKDTTFASR 95          

HSP 2 Score: 24.2534 bits (51), Expect = 4.012e-13
Identity = 13/48 (27.08%), Postives = 21/48 (43.75%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAG 527
            P    W+ LRK+C   +  + K+     +R  +   LV  V  +  AG
Sbjct:  115 PYGGNWRMLRKLCMSELLNTHKVRQLAAVRDSETLSLVRKVVYAAGAG 162          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71A2_SOLME (Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71A2 PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 4.015e-13
Identity = 36/99 (36.36%), Postives = 53/99 (53.54%), Query Frame = 2
Query:   41 WISCILWLLFTWVWVKALKSFSRGSIK----LPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            W S ++  LF ++++     F   S K    L P P   PIIGNL QLG  PH+SL  L++ +GP+M L  G    +V SS   A+ +++ HD    +R
Sbjct:    7 WYSLLI-PLFVFIFLLIHHCFFTTSKKQNMLLLPSPRKLPIIGNLHQLGSLPHRSLHKLSQKYGPVMLLHFGSKPVIVASSVDAARDIMKTHDVVWASR 104          

HSP 2 Score: 32.7278 bits (73), Expect = 4.015e-13
Identity = 14/78 (17.95%), Postives = 42/78 (53.85%), Query Frame = 3
Query:  357 RVEYG---IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLS 581
            R+ YG   + + P    W++ + I  LH+ ++ ++ + +++R ++   ++  +++ C +   I++G+       N++S
Sbjct:  112 RLSYGSKDVGFSPFGEYWRRAKSITVLHLLSNTRVQSYRNVRAEETANMIGKIRQGCDS-SVINLGEHLCSLTNNIIS 188          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BJ_ARATH (Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=CYP71B19 PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 40/95 (42.11%), Postives = 55/95 (57.89%), Query Frame = 2
Query:   44 ISCILWLLFTWV-WVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            IS +   L T+V  +   K   R    LPP P  +P+IGNL Q+G  PH+SL  LA+ +GP+M L  G V   V+SS   A++VL+ HD   C+R
Sbjct:    3 ISFLCVFLITFVSLIFFAKKIKRSKWNLPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPITVVSSREAAEEVLRTHDLDCCSR 97          
The following BLAST results are available for this feature:
BLAST of CF417412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71AJ_ARATH1.087e-1333.04Cytochrome P450 71A19 OS=Arabidopsis thaliana GN=C... [more]
C71BD_ARATH1.115e-1335.16Cytochrome P450 71B13 OS=Arabidopsis thaliana GN=C... [more]
C71AE_ARATH1.411e-1335.87Cytochrome P450 71A14 OS=Arabidopsis thaliana GN=C... [more]
C71B6_ARATH1.901e-1341.57Cytochrome P450 71B6 OS=Arabidopsis thaliana GN=CY... [more]
C71BT_ARATH2.382e-1343.59Cytochrome P450 71B29 OS=Arabidopsis thaliana GN=C... [more]
C71DD_MENPI3.092e-1340.58Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71B8_ARATH3.243e-1356.52Cytochrome P450 71B8 OS=Arabidopsis thaliana GN=CY... [more]
C99A1_SORBI4.012e-1351.43Cytochrome P450 CYP99A1 (Fragment) OS=Sorghum bico... [more]
C71A2_SOLME4.015e-1336.36Cytochrome P450 71A2 OS=Solanum melongena GN=CYP71... [more]
C71BJ_ARATH5.532e-1342.11Cytochrome P450 71B19 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-342 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417412 ID=CF417412; Name=CF417412; organism=Citrus sinensis; type=EST; length=723bp
GTTTCCCACAGGGCCAAAAGTAAGATCAGAGATGCAAAGCTGGATAAGCT
GCATACTATGGCTTCTATTCACATGGGTTTGGGTCAAGGCTTTAAAGTCC
TTTTCTAGAGGATCAATAAAGCTTCCACCGGGGCCGACGCCTTGGCCGAT
CATCGGAAACCTCCCGCAACTTGGGCACAAACCTCACAAGTCACTAGCCG
ACCTTGCCAAGGTCCATGGCCCAATCATGAGTCTAAAAATTGGACAGGTG
ACCACAGTAGTCATTTCTTCAGCTTCCATGGCCAAACAAGTCCTTCAAGA
TCATGACGCAGCTTTATGCAATCGAAACGTTCCAGATTCTGTGAGTTCCC
ACCAGAAGGGTGGAATACGGGATCCCATGGCTCCCTGCCTCCACGCAGTG
GAAAAAGCTTCGAAAAATATGCAACCTACATATTTTCACCAGTCAGAAAC
TTGATGCCAATCAAGACCTCCGGCGCAAGAAAATCCAACAACTCGTTGCT
TTTGTTCAAGAAAGTTGCCATGCGGGAGAAGCAATCGATATTGGCCAAGC
AGCTTTCGATACTGCAGTTAATCTATTGTCCAATACGATTTTTTCTGTTG
ATTTGGCTGACCCTAATTCAGCTTCCGCAAGGGAGTTTAAGAATTGATGT
GGGGNTTNGATGGTAGAATCTGGAAAGCCTAACGTGTCCGATTTTTTTCC
TATGCTTAGAAAGCTTGATATAC
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