CF417412

Overview
NameCF417412
Unique NameCF417412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71B3_ARATH (Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CYP71B3 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 5.532e-13
Identity = 44/116 (37.93%), Postives = 62/116 (53.45%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKAL--KSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGGIRDPMAP 385
            +S +L+  F  V +  +  K F      LPP P   PIIGNL QL    H+ L DL+K HGP++ L++G +  VVISS   A++VL+ HD   C R   ++ S   + G     AP
Sbjct:    1 MSILLYFFFLPVILSLIFMKKFKDSKRNLPPSPPKLPIIGNLHQLRGLFHRCLHDLSKKHGPVLLLRLGFIDMVVISSKEAAEEVLKVHDLECCTRPKTNASSKFSRDGKDIAFAP 116          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C7D95_MENSP (Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 6.776e-13
Identity = 33/96 (34.38%), Postives = 58/96 (60.42%), Query Frame = 2
Query:   47 SCILWLLFTWVWVKALKSFSRGSIK--LPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            S I+ L+ T+V    +K + +   +  LPPGP   P++G+L  L G  P  ++AD+AK +GP+  +++G+V +VV+SS    K+ ++  D A  +R
Sbjct:    7 SAIIILVATFVASLLIKQWRKSESRQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADR 102          

HSP 2 Score: 35.039 bits (79), Expect = 6.776e-13
Identity = 17/76 (22.37%), Postives = 40/76 (52.63%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLAD 611
            P S  W+++RKIC   + +++ + +   +R+ ++ +L+  +Q S  AGE +D+ +       +++    F   + D
Sbjct:  122 PYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND 195          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 6.776e-13
Identity = 34/96 (35.42%), Postives = 57/96 (59.38%), Query Frame = 2
Query:   47 SCILWLLFTWVWVKALKSF--SRGSIKLPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            S I+ L+ T+V    +K +  S     LPPGP   P++G+L  L G  P  ++AD+AK +GP+  +++G+V +VV+SS    K+ ++  D A  +R
Sbjct:    7 SAIIILVATFVASLLIKQWRKSESQQNLPPGPPKLPLVGHLHLLWGKLPQHAMADMAKKYGPVTHVQLGEVFSVVLSSREATKEAMKLLDPACADR 102          

HSP 2 Score: 35.039 bits (79), Expect = 6.776e-13
Identity = 17/76 (22.37%), Postives = 40/76 (52.63%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLAD 611
            P S  W+++RKIC   + +++ + +   +R+ ++ +L+  +Q S  AGE +D+ +       +++    F   + D
Sbjct:  122 PYSDHWRQMRKICVSELLSARNVRSFGFIRQDEMSRLLRHLQSS--AGETVDMTERIATLTCSIICRAAFGAIIND 195          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BU_ARATH (Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=CYP71B31 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.225e-13
Identity = 43/95 (45.26%), Postives = 55/95 (57.89%), Query Frame = 2
Query:   44 ISCILWLLFTW-VWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            +S  L LLF + ++    K+      KLPPGPT  P+IGNL QLG   H SL  L+  HGP+M ++ G V   V SS   AK+VL+ HD   CNR
Sbjct:    1 MSMFLGLLFLFPLFFILFKNLLPPRKKLPPGPTGLPLIGNLHQLGRLLHSSLHKLSLEHGPVMLVRWGVVPMAVFSSNEAAKEVLKTHDLETCNR 95          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AK_ARATH (Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=CYP71A20 PE=2 SV=2)

HSP 1 Score: 66.6254 bits (161), Expect = 1.927e-12
Identity = 39/114 (34.21%), Postives = 55/114 (48.25%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGGIRDPMAP 385
            I+  L  L   +    LK  +  +  LPP P   P+IGNL QL    H+SL  L+  +GP+M L  G+   +++SSA +A  V++ HD    NR     V     GG     AP
Sbjct:    6 ITLCLTTLLALLLKSILKRTATKNFNLPPSPWRLPVIGNLHQLSLHTHRSLRSLSLRYGPLMLLHFGRTPVLIVSSADVAHDVMKTHDLVCANRPKTKVVDKILSGGRDVAFAP 119          

HSP 2 Score: 25.7942 bits (55), Expect = 1.927e-12
Identity = 6/48 (12.50%), Postives = 30/48 (62.50%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQES 515
            + + P    W++++ IC  ++  ++ + + + +R ++I++++  ++++
Sbjct:  115 VAFAPYGEYWRQMKSICIQNLLNNKMVRSYEKIREEEIKRMIEKLEKA 162          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.102e-12
Identity = 41/107 (38.32%), Postives = 60/107 (56.07%), Query Frame = 2
Query:   65 LFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGGIRDPMAP 385
            L + + +K +K  +R    LPP P   P+IGNL QL    HK L DL+K HGP++ L++G +  VVISS   A++ L+ HD   C R + +  S   + G    +AP
Sbjct:   10 LLSLIIIKKIKDSNRN---LPPSPLKLPVIGNLYQLRGLFHKCLHDLSKKHGPVLLLRLGFLDMVVISSTEAAEEALKVHDLECCTRPITNVTSKLWRDGQDIGLAP 113          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BK_ARATH (Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=CYP71B20 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 2
Query:   50 CILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            C++ L     + K +K        LPP P  +P+IGNL Q+G  PH+SL  LA+ +GP+M L  G V   V+SS   A++VL+ HD   C+R
Sbjct:    9 CLITLASLIFFAKKIKHLKWN---LPPSPPKFPVIGNLHQIGELPHRSLQHLAERYGPVMLLHFGFVPVTVVSSREAAEEVLRTHDLDCCSR 97          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71BE_ARATH (Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=CYP71B14 PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12
Identity = 38/86 (44.19%), Postives = 50/86 (58.14%), Query Frame = 2
Query:   68 FTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            F + ++   K        LPPGP   PIIGNL QLG KP +SL  L++ +G +MSLK G V+ VV S+    K VL+  DA  C+R
Sbjct:   11 FFFAFILIAKDTRTTKKNLPPGPPRLPIIGNLHQLGSKPQRSLFKLSEKYGSLMSLKFGNVSAVVASTPETVKDVLKTFDAECCSR 96          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71A6_NEPRA (Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa GN=CYP71A6 PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 3.246e-12
Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 2
Query:  125 PPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            PP P   P++GNL QLG  PH+SL  L++ +GP+M L  G V  +V SS   A++++++ D    NR
Sbjct:   28 PPSPPKLPVLGNLHQLGTFPHRSLQSLSRRYGPVMQLHFGSVPVLVASSPEAAREIMKNQDLNFSNR 94          

HSP 2 Score: 27.7202 bits (60), Expect = 3.246e-12
Identity = 21/115 (18.26%), Postives = 49/115 (42.61%), Query Frame = 3
Query:  366 YGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIF-SVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPML 707
            + + + P    W+++R IC L + +++++   Q  RR + ++    V++     +            +  L+N +F  + L      +        G   V S K N+++F+ +L
Sbjct:  108 HDVAFAPYGEYWRQIRSICVLQLLSNKRV---QSFRRVREEETSIMVEKIMQLQKTTPTAAVNLTDLLTCLTNDVFCRIALGKKYGGTTTG----DGEYHVRSLKKNLAEFYVLL 215          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AR_ARATH (Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=CYP71A27 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.116e-12
Identity = 38/108 (35.19%), Postives = 59/108 (54.63%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKAL-KSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSVSSHQKGG 364
            IS  L  L  ++++K L K  +    KLPP P   P+IGNL QLG  PH+ L  L+  +GP+M L  G+V  +V+S   +   +++ HD    NR    +++   +GG
Sbjct:    6 ISLCLTTLLAFLFLKPLLKRITTTKPKLPPSPWRLPVIGNLHQLGPNPHRYLHSLSLRYGPLMLLHFGRVPVLVVSCPDVTNDIMKTHDLKFANRPKSKAINIFMEGG 113          
The following BLAST results are available for this feature:
BLAST of CF417412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71B3_ARATH5.532e-1337.93Cytochrome P450 71B3 OS=Arabidopsis thaliana GN=CY... [more]
C7D95_MENSP6.776e-1334.38Cytochrome P450 71D95 OS=Mentha spicata GN=CYP71D9... [more]
C7D95_MENGR6.776e-1335.42Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71BU_ARATH7.225e-1345.26Cytochrome P450 71B31 OS=Arabidopsis thaliana GN=C... [more]
C71AK_ARATH1.927e-1234.21Cytochrome P450 71A20 OS=Arabidopsis thaliana GN=C... [more]
C71BO_ARATH2.102e-1238.32Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C71BK_ARATH2.745e-1240.22Cytochrome P450 71B20 OS=Arabidopsis thaliana GN=C... [more]
C71BE_ARATH2.745e-1244.19Cytochrome P450 71B14 OS=Arabidopsis thaliana GN=C... [more]
C71A6_NEPRA3.246e-1241.79Cytochrome P450 71A6 (Fragment) OS=Nepeta racemosa... [more]
C71AR_ARATH6.116e-1235.19Cytochrome P450 71A27 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-342 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417412 ID=CF417412; Name=CF417412; organism=Citrus sinensis; type=EST; length=723bp
GTTTCCCACAGGGCCAAAAGTAAGATCAGAGATGCAAAGCTGGATAAGCT
GCATACTATGGCTTCTATTCACATGGGTTTGGGTCAAGGCTTTAAAGTCC
TTTTCTAGAGGATCAATAAAGCTTCCACCGGGGCCGACGCCTTGGCCGAT
CATCGGAAACCTCCCGCAACTTGGGCACAAACCTCACAAGTCACTAGCCG
ACCTTGCCAAGGTCCATGGCCCAATCATGAGTCTAAAAATTGGACAGGTG
ACCACAGTAGTCATTTCTTCAGCTTCCATGGCCAAACAAGTCCTTCAAGA
TCATGACGCAGCTTTATGCAATCGAAACGTTCCAGATTCTGTGAGTTCCC
ACCAGAAGGGTGGAATACGGGATCCCATGGCTCCCTGCCTCCACGCAGTG
GAAAAAGCTTCGAAAAATATGCAACCTACATATTTTCACCAGTCAGAAAC
TTGATGCCAATCAAGACCTCCGGCGCAAGAAAATCCAACAACTCGTTGCT
TTTGTTCAAGAAAGTTGCCATGCGGGAGAAGCAATCGATATTGGCCAAGC
AGCTTTCGATACTGCAGTTAATCTATTGTCCAATACGATTTTTTCTGTTG
ATTTGGCTGACCCTAATTCAGCTTCCGCAAGGGAGTTTAAGAATTGATGT
GGGGNTTNGATGGTAGAATCTGGAAAGCCTAACGTGTCCGATTTTTTTCC
TATGCTTAGAAAGCTTGATATAC
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