CF417412

Overview
NameCF417412
Unique NameCF417412
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71DF_MENPI (Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D15 PE=1 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 7.110e-12
Identity = 29/70 (41.43%), Postives = 44/70 (62.86%), Query Frame = 2
Query:  119 KLPPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            K PPGP   P+IG+L  L G  P  +LA +AK +GP+  +++G+V +VV+SS    K+ ++  D A  NR
Sbjct:   34 KFPPGPPKLPLIGHLHLLWGKLPQHALASVAKEYGPVAHVQLGEVFSVVLSSREATKEAMKLVDPACANR 103          

HSP 2 Score: 33.8834 bits (76), Expect = 7.110e-12
Identity = 17/76 (22.37%), Postives = 40/76 (52.63%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLAD 611
            P S  W+++RKIC   + +S+ + +   +R+ ++ +L+  ++ S  AG A+D+ +       +++    F   + D
Sbjct:  123 PYSEHWRQMRKICVSELLSSRNVRSFGFIRQDEVSRLLRHLRSS--AGAAVDMTERIETLTCSIICRAAFGSVIRD 196          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71C1_MAIZE (Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 SV=1)

HSP 1 Score: 51.9878 bits (123), Expect = 1.196e-11
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 2
Query:  119 KLPPGPT-PWPIIGNLPQLGHKPHKSLADL-AKV-HGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            +LPP P    PIIG+L  +G  PH S  DL AK  H  +M +++G V T+V+S+   A+ VL+ HD  L +R
Sbjct:   54 RLPPTPPGKLPIIGHLHLIGSHPHVSFRDLHAKYGHNGLMLVQVGAVPTIVVSTPQAAEAVLRTHDHVLASR 125          

HSP 2 Score: 37.7354 bits (86), Expect = 1.196e-11
Identity = 25/121 (20.66%), Postives = 57/121 (47.11%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHA--GEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASARE--FKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            + + P    W+  RK+ N H+ +++ + + +  R ++++ +VA ++++  A  G A+D+ +     A + +   +    L + +    R   F+          G  NV D+FP L  +D+
Sbjct:  141 VAFAPYGVYWRTARKVVNTHLLSAKMVFSKRREREEEVRLVVARIRDAAEASPGTALDMTELLGGYASDFVCRAV----LGESHRKQGRNKLFRELTETSAALLGGFNVEDYFPKLADVDL 257          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C93B1_GLYEC (Licodione synthase OS=Glycyrrhiza echinata GN=CYP93B1 PE=1 SV=2)

HSP 1 Score: 51.2174 bits (121), Expect = 1.197e-11
Identity = 30/72 (41.67%), Postives = 41/72 (56.94%), Query Frame = 2
Query:  101 FSRGSIKLPPGPT-PWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAA 313
            F R    LPP P    PIIG++  LG   H+S  +L+  +GP+ SL  G V  VV S+   AKQ+LQ ++ A
Sbjct:   25 FHRYGKNLPPSPFFRLPIIGHMHMLGPLLHQSFHNLSHRYGPLFSLNFGSVLCVVASTPHFAKQLLQTNELA 96          

HSP 2 Score: 38.5058 bits (88), Expect = 1.197e-11
Identity = 27/120 (22.50%), Postives = 55/120 (45.83%), Query Frame = 3
Query:  363 EYGIPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPNVSDFFPMLRKLDI 722
            E  + + P    W+ ++K+    +  S+ ++  Q LR ++  QL+  +     A EA++I +         L+N + S+ +       A E ++         G+ NVSDF  + +K+D+
Sbjct:  112 ESSLAFAPYGDYWRFIKKLSMNELLGSRSINNFQHLRAQETHQLLRLLSNRARAFEAVNITEELLK-----LTNNVISIMMV----GEAEEARDVVRDVTEIFGEFNVSDFIWLFKKMDL 222          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AN_ARATH (Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=CYP71A23 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.200e-11
Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 2
Query:  128 PGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            P P   P+IGNL QL   PH+SL  L+  +GP+M L  G V  +V S+A  A+ VL+ HD    +R
Sbjct:   31 PSPPRLPLIGNLHQLSQHPHRSLCYLSHRYGPLMLLHFGSVPVIVASTAEAARDVLKTHDRVFASR 96          

HSP 2 Score: 28.8758 bits (63), Expect = 1.200e-11
Identity = 9/44 (20.45%), Postives = 29/44 (65.91%), Query Frame = 3
Query:  384 PASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQES 515
            P    W++++ +  LH+ +++ + + QD+R+++I  ++  +++S
Sbjct:  116 PYGEYWRQMKSVSVLHLLSNKMVRSFQDVRQEEITLMMETIRKS 159          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C519B_DICDI (Probable cytochrome P450 519B1 OS=Dictyostelium discoideum GN=cyp519b1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.035e-11
Identity = 39/100 (39.00%), Postives = 53/100 (53.00%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNRNVPDSV 343
            I+ IL+ +  W+    ++   R S   PP P   PIIG+L +L   PH+SL +LAKV+G + SL IG   TVVI+  S  K V         NR  P S+
Sbjct:    4 INLILYFILFWIVFDFIRKNRRISFNDPPSPWALPIIGHLHKLSLNPHRSLTELAKVYGGVYSLHIGDSKTVVITDVSAFKDVTIKQFKNFANRPQPKSI 103          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C71AF_ARATH (Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=CYP71A15 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 6.762e-11
Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 2
Query:   44 ISCILWLLFTWVWVKALKSFSRGSIKLPPGPTPWPIIGNLPQLGHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            IS  L  +  ++ +K L + +     LPP P   P+IGNL QL   PH+SL  L+  +GP+M L  G+V  +V+SS+ +A  +++ HD  + NR
Sbjct:    6 ISLCLATILAFLLLKPLLNRTVAKDNLPPSPWRVPVIGNLHQLSLHPHRSLRSLSHRYGPLMLLHFGRVPILVVSSSDVAHDLMKTHDLKVANR 99          
BLAST of CF417412 vs. ExPASy Swiss-Prot
Match: C99A3_ORYSJ (Cytochrome P450 99A3 OS=Oryza sativa subsp. japonica GN=CYP99A3 PE=2 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 9.656e-11
Identity = 32/68 (47.06%), Postives = 44/68 (64.71%), Query Frame = 2
Query:  125 PPGPTPWPIIGNLPQL-GHKPHKSLADLAKVHGPIMSLKIGQVTTVVISSASMAKQVLQDHDAALCNR 325
            PPGP   P++G L  L   +P  +L DLA  +GP+M L+ GQV TVVISS + A++VL+D D    +R
Sbjct:   36 PPGPWNLPLVGGLLHLLRSQPQVALRDLAGKYGPVMFLRTGQVDTVVISSPAAAQEVLRDKDVTFASR 103          

HSP 2 Score: 25.7942 bits (55), Expect = 9.656e-11
Identity = 29/120 (24.17%), Postives = 48/120 (40.00%), Query Frame = 3
Query:  372 IPWLPASTQWKKLRKICNLHIFTSQKLDANQDLRRKKIQQLVAFVQESCHAGEAIDIGQAAFDTAVNLLSNTIFSVDLADPNSASAREFKN*CGXXMVESGKPN----VSDFFPMLRKLD 719
            I + P    W+ LRK+C + + +++ +     +R  +   LV  +       EA   G+  F  A  L+S T      A    A   E +      + E+ K +      D FP LR +D
Sbjct:  119 IGFAPYGAYWRMLRKLCTVELLSTKMVRQLAPIRDGETLALVRNI-------EAAAGGKKPFTLATLLISCTNTFTAKAAFGQACGGELQEQFLTALDEALKFSNGFCFGDLFPSLRFID 231          
The following BLAST results are available for this feature:
BLAST of CF417412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
C71DF_MENPI7.110e-1241.43Cytochrome P450 71D15 OS=Mentha piperita GN=CYP71D... [more]
C71C1_MAIZE1.196e-1143.06Cytochrome P450 71C1 OS=Zea mays GN=CYP71C1 PE=2 S... [more]
C93B1_GLYEC1.197e-1141.67Licodione synthase OS=Glycyrrhiza echinata GN=CYP9... [more]
C71AN_ARATH1.200e-1143.94Cytochrome P450 71A23 OS=Arabidopsis thaliana GN=C... [more]
C519B_DICDI3.035e-1139.00Probable cytochrome P450 519B1 OS=Dictyostelium di... [more]
C71AF_ARATH6.762e-1137.23Cytochrome P450 71A15 OS=Arabidopsis thaliana GN=C... [more]
C99A3_ORYSJ9.656e-1147.06Cytochrome P450 99A3 OS=Oryza sativa subsp. japoni... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-342 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417412 ID=CF417412; Name=CF417412; organism=Citrus sinensis; type=EST; length=723bp
GTTTCCCACAGGGCCAAAAGTAAGATCAGAGATGCAAAGCTGGATAAGCT
GCATACTATGGCTTCTATTCACATGGGTTTGGGTCAAGGCTTTAAAGTCC
TTTTCTAGAGGATCAATAAAGCTTCCACCGGGGCCGACGCCTTGGCCGAT
CATCGGAAACCTCCCGCAACTTGGGCACAAACCTCACAAGTCACTAGCCG
ACCTTGCCAAGGTCCATGGCCCAATCATGAGTCTAAAAATTGGACAGGTG
ACCACAGTAGTCATTTCTTCAGCTTCCATGGCCAAACAAGTCCTTCAAGA
TCATGACGCAGCTTTATGCAATCGAAACGTTCCAGATTCTGTGAGTTCCC
ACCAGAAGGGTGGAATACGGGATCCCATGGCTCCCTGCCTCCACGCAGTG
GAAAAAGCTTCGAAAAATATGCAACCTACATATTTTCACCAGTCAGAAAC
TTGATGCCAATCAAGACCTCCGGCGCAAGAAAATCCAACAACTCGTTGCT
TTTGTTCAAGAAAGTTGCCATGCGGGAGAAGCAATCGATATTGGCCAAGC
AGCTTTCGATACTGCAGTTAATCTATTGTCCAATACGATTTTTTCTGTTG
ATTTGGCTGACCCTAATTCAGCTTCCGCAAGGGAGTTTAAGAATTGATGT
GGGGNTTNGATGGTAGAATCTGGAAAGCCTAACGTGTCCGATTTTTTTCC
TATGCTTAGAAAGCTTGATATAC
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