CF417413 | Citrus Genome Database

Overview


Name	CF417413
Unique Name	CF417413
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	695

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_ORYSJ (Fructose-1,6-bisphosphatase, cytosolic OS=Oryza sativa subsp. japonica GN=Os01g0866400 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.908e-22
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SSGRT ++ SEE++    V+ +  G Y V FDPLDGSSNID  VS G
Sbjct:   73 QKKLDVLSNEVFVKALVSSGRTCVLVSEEDEEATFVDPALRGKYCVCFDPLDGSSNIDCGVSIG 136

HSP 2 Score: 53.9138 bits (128), Expect = 1.908e-22
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L +Q ++     +LTI+LS I   CK +AS V +AG++ L G+ G  NVQGE+QK+
Sbjct:   11 DLMTITRYVLNEQSRNPEARGDLTILLSHIVLGCKFVASAVNKAGLAKLIGLAGETNVQGEEQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_ORYSI (Fructose-1,6-bisphosphatase, cytosolic OS=Oryza sativa subsp. indica GN=OsI_04558 PE=2 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.908e-22
Identity = 36/64 (56.25%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SSGRT ++ SEE++    V+ +  G Y V FDPLDGSSNID  VS G
Sbjct:   73 QKKLDVLSNEVFVKALVSSGRTCVLVSEEDEEATFVDPALRGKYCVCFDPLDGSSNIDCGVSIG 136

HSP 2 Score: 53.9138 bits (128), Expect = 1.908e-22
Identity = 27/65 (41.54%), Postives = 44/65 (67.69%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L +Q ++     +LTI+LS I   CK +AS V +AG++ L G+ G  NVQGE+QK+
Sbjct:   11 DLMTITRYVLNEQSRNPEARGDLTILLSHIVLGCKFVASAVNKAGLAKLIGLAGETNVQGEEQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_BRANA (Fructose-1,6-bisphosphatase, cytosolic OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 2.483e-22
Identity = 38/64 (59.38%), Postives = 46/64 (71.88%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SN+VF   L SSGRT ++ SEE++    VE S  G Y VVFDPLDGSSNID  VS G
Sbjct:   72 QKKLDVLSNDVFVKALVSSGRTSVLVSEEDEEATFVESSKCGKYCVVFDPLDGSSNIDCGVSIG 135

HSP 2 Score: 49.2914 bits (116), Expect = 2.483e-22
Identity = 26/66 (39.39%), Postives = 44/66 (66.67%), Query Frame = 2

Query:  239 EIETLTNWLLKQEQSGVIDA--ELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L  EQS   ++  + TI+LS+I   CK + S V +AG++ L G+ G  N+QGE+QK+
Sbjct:   10 DLMTITRFVLN-EQSKYPESRGDFTILLSNIVLGCKFVCSAVNKAGLAKLIGLAGDTNIQGEEQKK 74

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_PEA (Fructose-1,6-bisphosphatase, cytosolic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 7.112e-22
Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SSGRT I+ SEE++    +E S  G Y VVFDPLDGS NID  VS G
Sbjct:   73 QKKLDVLSNEVFVKALTSSGRTCILVSEEDEEATFIEPSLRGKYCVVFDPLDGSFNIDCGVSIG 136

HSP 2 Score: 49.2914 bits (116), Expect = 7.112e-22
Identity = 24/65 (36.92%), Postives = 41/65 (63.08%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L +Q +      + TI+LS I   CK + S V +AG++ L G+ G  N+QGE+QK+
Sbjct:   11 DLMTITRYVLNEQSKRPESRGDFTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNIQGEEQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_BETVU (Fructose-1,6-bisphosphatase, cytosolic OS=Beta vulgaris PE=2 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 1.566e-21
Identity = 39/64 (60.94%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SSGRT I+ SEE++    VE S  G Y VVFDPLDG SNID  VS G
Sbjct:   73 QKKLDVLSNEVFIKALISSGRTCILVSEEDEEATFVEPSLRGKYCVVFDPLDGCSNIDCGVSIG 136

HSP 2 Score: 48.1358 bits (113), Expect = 1.566e-21
Identity = 23/65 (35.38%), Postives = 41/65 (63.08%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L +Q +      + TI++S I   CK + S V +AG++ L G+ G  N+QGE+QK+
Sbjct:   11 DLMTITRFVLNEQSKRPESRGDFTILMSHIVLGCKFVCSAVNKAGLAKLIGLAGETNIQGEEQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_SACHY (Fructose-1,6-bisphosphatase, cytosolic OS=Saccharum hybrid GN=CFBP PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 2.650e-21
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SSGRT ++ SEE++    V+    G Y V FDPLDGSSNID  VS G
Sbjct:   73 QKKLDVLSNEVFVKALVSSGRTCVLVSEEDEETTFVDPKLRGKYCVCFDPLDGSSNIDCGVSIG 136

HSP 2 Score: 50.447 bits (119), Expect = 2.650e-21
Identity = 26/65 (40.00%), Postives = 42/65 (64.62%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T  +L +Q ++     + TI+LS I   CK +AS V +AG++ L G+ G  NVQGE+QK+
Sbjct:   11 DLMTITRHVLNEQSRNPESRGDFTILLSHIVLGCKFVASAVNKAGLAQLIGLAGETNVQGEEQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_MUSAC (Fructose-1,6-bisphosphatase, cytosolic OS=Musa acuminata GN=FBPban1 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 5.835e-21
Identity = 40/65 (61.54%), Postives = 47/65 (72.31%), Query Frame = 3

Query:  420 TRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++RKLDV+SNEVF   L SSGRT I+ SEE++    V+ S  G Y VVFDPLDGSSNID  VS G
Sbjct:   72 SKRKLDVLSNEVFVKALISSGRTCILVSEEDEEATFVDPSLRGKYCVVFDPLDGSSNIDCGVSIG 136

HSP 2 Score: 43.5134 bits (101), Expect = 5.835e-21
Identity = 22/65 (33.85%), Postives = 39/65 (60.00%), Query Frame = 2

Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ T+T ++L +Q +      + TI+LS I   CK + S V +AG++ L G+ G  NVQG  +++
Sbjct:   11 DLMTITRYVLNEQSRHQESRGDFTILLSHIVLGCKFVCSAVNKAGLAKLIGLAGETNVQGGSKRK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P2_SOLTU (Fructose-1,6-bisphosphatase, cytosolic OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.173e-20
Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV+SNEVF   L SS RT I+ SEE++    V  +  G Y VVFDPLDGSSNID  VS G
Sbjct:   73 QKKLDVLSNEVFIKALVSSNRTCILVSEEDEEATFVRPANRGKYCVVFDPLDGSSNIDCGVSIG 136

HSP 2 Score: 48.1358 bits (113), Expect = 2.173e-20
Identity = 25/69 (36.23%), Postives = 42/69 (60.87%), Query Frame = 2

Query:  227 RSSYEIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            R   ++ T+T ++L +Q +      + +I+LS I   CK + + V +AG++ L G+ G  NVQGEDQK+
Sbjct:    7 RHRTDLMTITRFVLNEQTKHPESRGDFSILLSHIVLGCKFVCTAVNKAGLAKLLGLAGETNVQGEDQKK 75

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P1_HUMAN (Fructose-1,6-bisphosphatase 1 OS=Homo sapiens GN=FBP1 PE=1 SV=4)

HSP 1 Score: 67.781 bits (164), Expect = 3.677e-20
Identity = 33/63 (52.38%), Postives = 43/63 (68.25%), Query Frame = 3

Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLDV+SN++  N L+SS  T ++ SEE+   + VE    G Y+V FDPLDGSSNID  VS G
Sbjct:   72 KKLDVLSNDLVMNMLKSSFATCVLVSEEDKHAIIVEPEKRGKYVVCFDPLDGSSNIDCLVSVG 134

HSP 2 Score: 51.2174 bits (121), Expect = 3.677e-20
Identity = 25/64 (39.06%), Postives = 44/64 (68.75%), Query Frame = 2

Query:  239 EIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++ TLT +++++ +      ELT +L+S+ TA K I+S V++AGI++L GI G+ NV G+  K+
Sbjct:   10 DVNTLTRFVMEEGRKARGTGELTQLLNSLCTAVKAISSAVRKAGIAHLYGIAGSTNVTGDQVKK 73

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16P1_MOUSE (Fructose-1,6-bisphosphatase 1 OS=Mus musculus GN=Fbp1 PE=2 SV=3)

HSP 1 Score: 65.4698 bits (158), Expect = 8.090e-20
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 3

Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD++SN++  N L+SS  T ++ SEE    + +E    G Y+V FDPLDGSSNID  VS G
Sbjct:   72 KKLDILSNDLVINMLKSSYATCVLVSEENTNAIIIEPEKRGKYVVCFDPLDGSSNIDCLVSIG 134

HSP 2 Score: 52.373 bits (124), Expect = 8.090e-20
Identity = 27/64 (42.19%), Postives = 43/64 (67.19%), Query Frame = 2

Query:  239 EIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +I TLT ++++Q +      ELT +L+S+ TA K I+S V++AGI+ L GI G+ NV G+  K+
Sbjct:   10 DISTLTRFVMEQGRKAQGTGELTQLLNSLCTAIKAISSAVRQAGIAQLYGIAGSTNVTGDQVKK 73

The following BLAST results are available for this feature:

BLAST of CF417413 vs. ExPASy Swiss-Prot

BLAST of CF417413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237


Match Name	E-value	Identity	Description
F16P2_ORYSJ	1.908e-22	56.25	Fructose-1,6-bisphosphatase, cytosolic OS=Oryza sa...	[more]
F16P2_ORYSI	1.908e-22	56.25	Fructose-1,6-bisphosphatase, cytosolic OS=Oryza sa...	[more]
F16P2_BRANA	2.483e-22	59.38	Fructose-1,6-bisphosphatase, cytosolic OS=Brassica...	[more]
F16P2_PEA	7.112e-22	59.38	Fructose-1,6-bisphosphatase, cytosolic OS=Pisum sa...	[more]
F16P2_BETVU	1.566e-21	60.94	Fructose-1,6-bisphosphatase, cytosolic OS=Beta vul...	[more]
F16P2_SACHY	2.650e-21	56.25	Fructose-1,6-bisphosphatase, cytosolic OS=Saccharu...	[more]
F16P2_MUSAC	5.835e-21	61.54	Fructose-1,6-bisphosphatase, cytosolic OS=Musa acu...	[more]
F16P2_SOLTU	2.173e-20	57.81	Fructose-1,6-bisphosphatase, cytosolic OS=Solanum ...	[more]
F16P1_HUMAN	3.677e-20	52.38	Fructose-1,6-bisphosphatase 1 OS=Homo sapiens GN=F...	[more]
F16P1_MOUSE	8.090e-20	49.21	Fructose-1,6-bisphosphatase 1 OS=Mus musculus GN=F...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_115000-343 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417413 ID=CF417413; Name=CF417413; organism=Citrus sinensis; type=EST; length=695bp
GCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTC
TCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGT
GTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAA
GAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGA
CAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACG
CTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGA
GCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTT
CTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACTGGAATTCAGGGTGCT
GTCAATGTTCAAGGCGAGGACCAGAAGGAAGCTCGACGTCGTTTCAAATG
AGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCG
TCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAA
CTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTG
CAGTGTCTACTGGNATCCATCTTTGGCATATACAGCCCAAATGATGAGTG
TCTTGCCGATATTGGTGATGATCCTACTCTGGGCAACACTGAACT