CF417413

Overview
NameCF417413
Unique NameCF417413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURMA (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia mallei GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.022e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.022e-14
Identity = 20/62 (32.26%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  + +  G  G+ NVQGE QK+
Sbjct:    8 TLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURM9 (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia mallei (strain NCTC 10229) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.022e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.022e-14
Identity = 20/62 (32.26%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  + +  G  G+ NVQGE QK+
Sbjct:    8 TLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURM7 (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia mallei (strain NCTC 10247) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.022e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.022e-14
Identity = 20/62 (32.26%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  + +  G  G+ NVQGE QK+
Sbjct:    8 TLSKYLIEQQRETHNLPADLRLLIEVVARACKAISYNVSKGALGDALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURCM (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.022e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.022e-14
Identity = 20/62 (32.26%), Postives = 39/62 (62.90%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  +    G  G+ NVQGE QK+
Sbjct:    8 TLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURA4 (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia ambifaria (strain MC40-6) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.022e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.022e-14
Identity = 20/62 (32.26%), Postives = 39/62 (62.90%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  +    G  G+ NVQGE QK+
Sbjct:    8 TLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURS3 (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia sp. (strain 383) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.023e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.023e-14
Identity = 20/62 (32.26%), Postives = 39/62 (62.90%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  +    G  G+ NVQGE QK+
Sbjct:    8 TLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_BURCJ (Fructose-1,6-bisphosphatase class 1 OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.023e-14
Identity = 29/69 (42.03%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD++SNE+  +     G    +ASEE +    +  +Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   63 QGEVQKKLDILSNEILLDANEWGGNLAAMASEEMETFFPIPANYPRGEYLLVFDPLDGSSNIDVNVSIG 131

HSP 2 Score: 41.2022 bits (95), Expect = 4.023e-14
Identity = 20/62 (32.26%), Postives = 39/62 (62.90%), Query Frame = 2 
Query:  248 TLTNWLLKQE-QSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q+ ++  + A+L +++  ++ ACK I+  V +  +    G  G+ NVQGE QK+
Sbjct:    8 TLSKFLIEQQRETNNLPADLRLLIEVVARACKAISYNVSKGALGEALGTAGSENVQGEVQKK 69
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_THIDA (Fructose-1,6-bisphosphatase class 1 OS=Thiobacillus denitrificans (strain ATCC 25259) GN=fbp PE=3 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.227e-14
Identity = 29/69 (42.03%), Postives = 43/69 (62.32%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +  T++KLDV++N++       +G    +ASEE D   A+   Y  G Y++VFDPLDGSSN+D  +S G
Sbjct:   61 QGETQKKLDVITNDIMIRSNEWAGHLAGMASEEMDDVYAIPGQYPLGKYLLVFDPLDGSSNVDVNISVG 129

HSP 2 Score: 39.6614 bits (91), Expect = 5.227e-14
Identity = 20/62 (32.26%), Postives = 37/62 (59.68%), Query Frame = 2 
Query:  248 TLTNWLLK-QEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TLT ++++ Q ++     + T +L+ + TACK I++ V +  +  + G   + NVQGE QK+
Sbjct:    6 TLTQFIIEEQRRTAGATGDFTSLLNDVVTACKAISNAVNKGALLGVMGALESENVQGETQKK 67
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PELPB (Fructose-1,6-bisphosphatase class 1 OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 60.077 bits (144), Expect = 5.228e-14
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 3 
Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD+ +NE   + +   GR  I+ SEE +  +   ++ SGNY ++FDPLDGSSNID  VS G
Sbjct:   66 KKLDLFANEKIISAIGQHGRFAIMGSEENEGVIIPPKNESGNYALLFDPLDGSSNIDVNVSVG 128

HSP 2 Score: 38.1206 bits (87), Expect = 5.228e-14
Identity = 18/44 (40.91%), Postives = 29/44 (65.91%), Query Frame = 2 
Query:  299 ELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ELT +L+ ++ A K +   V RAG+ ++ G  G+ NVQGE+ K+
Sbjct:   24 ELTDLLNDVAFAAKLVRREVVRAGLVDILGFTGSTNVQGEEVKK 67
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_VIBFM (Fructose-1,6-bisphosphatase class 1 OS=Vibrio fischeri (strain MJ11) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 6.790e-14
Identity = 31/66 (46.97%), Postives = 42/66 (63.64%), Query Frame = 3 
Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGN--YIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV +N+ F   L +  +   +ASEEED  VA  +  + N  Y+V+ DPLDGSSNID  VS G
Sbjct:   65 QQKLDVYANDKFKAALEARDQVCGVASEEEDEAVAFNKELNQNAKYVVLMDPLDGSSNIDVNVSVG 130

HSP 2 Score: 40.817 bits (94), Expect = 6.790e-14
Identity = 22/65 (33.85%), Postives = 37/65 (56.92%), Query Frame = 2 
Query:  239 EIETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            EI TL  +++ KQ        EL+ ++ SI  A K +   + +AG+ ++TG  G  N+QGE Q++
Sbjct:    3 EIRTLGEFIVAKQHDFPHASGELSSLIGSIKLAAKIVNREINKAGLVDITGASGEENIQGEQQQK 67
The following BLAST results are available for this feature:
BLAST of CF417413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
F16PA_BURMA4.022e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURM94.022e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURM74.022e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURCM4.022e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURA44.022e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURS34.023e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_BURCJ4.023e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Burkholderi... [more]
F16PA_THIDA5.227e-1442.03Fructose-1,6-bisphosphatase class 1 OS=Thiobacillu... [more]
F16PA_PELPB5.228e-1446.03Fructose-1,6-bisphosphatase class 1 OS=Pelodictyon... [more]
F16PA_VIBFM6.790e-1446.97Fructose-1,6-bisphosphatase class 1 OS=Vibrio fisc... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-343 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417413 ID=CF417413; Name=CF417413; organism=Citrus sinensis; type=EST; length=695bp
GCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTC
TCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGT
GTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAA
GAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGA
CAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACG
CTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGA
GCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTT
CTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACTGGAATTCAGGGTGCT
GTCAATGTTCAAGGCGAGGACCAGAAGGAAGCTCGACGTCGTTTCAAATG
AGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCG
TCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAA
CTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTG
CAGTGTCTACTGGNATCCATCTTTGGCATATACAGCCCAAATGATGAGTG
TCTTGCCGATATTGGTGATGATCCTACTCTGGGCAACACTGAACT
back to top