CF417413

Overview
NameCF417413
Unique NameCF417413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_ACTSZ (Fructose-1,6-bisphosphatase class 1 OS=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) GN=fbp PE=3 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 2.134e-11
Identity = 30/70 (42.86%), Postives = 39/70 (55.71%), Query Frame = 3
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVA--VEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +   + KLDV +N+ F   L +       ASEEED  VA   E   +  YI++ DPLDGSSNID  V+ G
Sbjct:   59 QGENQMKLDVFANDTFKRALMAREEVAGFASEEEDDFVAFDTERGRNARYIILTDPLDGSSNIDVNVAVG 128          

HSP 2 Score: 35.8094 bits (81), Expect = 2.134e-11
Identity = 25/63 (39.68%), Postives = 36/63 (57.14%), Query Frame = 2
Query:  242 IETLTNWLL-KQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISN-LTGIQGAVNVQGEDQ 424
            ++TL  +++ KQ +       LT +LSSI    K I   + RAG+SN + G  G  NVQGE+Q
Sbjct:    1 MKTLDEFIVEKQAEYPNAKGALTGILSSIRLVAKIIHRDINRAGLSNDILGYAGNQNVQGENQ 63          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_COLP3 (Fructose-1,6-bisphosphatase class 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fbp PE=3 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 2.136e-11
Identity = 34/62 (54.84%), Postives = 44/62 (70.97%), Query Frame = 3
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 596
            +   +++LDVV+NE+F + L  SG    I+SEEED  VA +E  +G YIV FDPLDGSSNID
Sbjct:   53 QGEVQKQLDVVANELFKDILLESGFVKAISSEEEDHSVAGDE--NGKYIVSFDPLDGSSNID 112          

HSP 2 Score: 26.1794 bits (56), Expect = 2.136e-11
Identity = 13/47 (27.66%), Postives = 26/47 (55.32%), Query Frame = 2
Query:  290 IDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +  +L  ++ +I  A K+I+  V +  + ++ G     N+QGE QK+
Sbjct:   13 VPLDLISLIKTILAATKEISFRVSQGHLGDVMGSTLDENIQGEVQKQ 59          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSYWF (Fructose-1,6-bisphosphatase class 1 OS=Psychrobacter sp. (strain PRwf-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 52.7582 bits (125), Expect = 2.770e-11
Identity = 28/64 (43.75%), Postives = 40/64 (62.50%), Query Frame = 3
Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV++N++    L ++     +ASEE D      ES  G  +V+FDPLDGSSNID  + TG
Sbjct:   60 QKKLDVIANDLLLEALTANKHCAGVASEELDDATPANES--GELLVLFDPLDGSSNIDINMPTG 121          

HSP 2 Score: 36.1946 bits (82), Expect = 2.770e-11
Identity = 16/40 (40.00%), Postives = 28/40 (70.00%), Query Frame = 2
Query:  311 VLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            V+++I+   KQI  L+++  ++++ G  GA NVQGE QK+
Sbjct:   23 VITTITNVGKQITDLLRQGALADIHGEAGAENVQGEQQKK 62          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16A1_PSEHT (Fructose-1,6-bisphosphatase class 1 1 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.600e-11
Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 3
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNID 596
            +  T++KLDV++N++  + L  SG    IASEEED  VA   +    YIV FDPLDGSSN D
Sbjct:   53 QGETQKKLDVLTNQLLKDILLESGYVKAIASEEEDYTVA--GNPDAEYIVAFDPLDGSSNTD 112          

HSP 2 Score: 31.187 bits (69), Expect = 3.600e-11
Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 2
Query:  299 ELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            EL  ++ +I  ACK+I+  V +  +S + G     N+QGE QK+
Sbjct:   16 ELISLIRTILAACKEISFRVGQGELSGVLGSTLDENIQGETQKK 59          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_RHORT (Fructose-1,6-bisphosphatase class 1 OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=fbp PE=3 SV=2)

HSP 1 Score: 52.373 bits (124), Expect = 6.046e-11
Identity = 27/69 (39.13%), Postives = 41/69 (59.42%), Query Frame = 3
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   + +LD++SN+ F      +G    +ASEE +  +   ESY+ G  ++VFDPLDGSSNID   + G
Sbjct:   63 QGENQARLDLMSNQAFVRATERTGHAAGLASEEMEEVLGFPESYARGTLLLVFDPLDGSSNIDINGTVG 131          

HSP 2 Score: 35.4242 bits (80), Expect = 6.046e-11
Identity = 16/44 (36.36%), Postives = 26/44 (59.09%), Query Frame = 2
Query:  293 DAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQ 424
            D+EL  +L  ++ ACK I+ +     ++ + G  G VN QGE+Q
Sbjct:   24 DSELLGLLLDVAQACKTISKMTAMGSLAGVHGYNGDVNPQGENQ 67          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_DESDG (Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio desulfuricans (strain G20) GN=fbp PE=3 SV=1)

HSP 1 Score: 51.2174 bits (121), Expect = 6.055e-11
Identity = 27/64 (42.19%), Postives = 41/64 (64.06%), Query Frame = 3
Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD  +N V  + +  +G    +ASEE    + V E + +G+YI++FDPLDGSSNID  ++ G
Sbjct:   65 QKLDEYANRVLIHRMERTGVLCAMASEENADLIRVPERFEAGDYILIFDPLDGSSNIDVNINVG 128          

HSP 2 Score: 36.5798 bits (83), Expect = 6.055e-11
Identity = 20/60 (33.33%), Postives = 32/60 (53.33%), Query Frame = 2
Query:  239 EIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGE 418
            ++    + LL Q +S     + T +L  +  A K I+  V +AG+ ++ G  G VNVQGE
Sbjct:    3 QVTVTEHLLLHQTKSPAATGQFTALLYDLILAAKIISKSVNKAGLLDVLGGTGQVNVQGE 62          
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_DESAD (Fructose-1,6-bisphosphatase class 1 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=fbp PE=3 SV=1)

HSP 1 Score: 50.8322 bits (120), Expect = 7.859e-11
Identity = 27/64 (42.19%), Postives = 38/64 (59.38%), Query Frame = 3
Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD  +N +  + +  SG    +ASEE    + +      GNYI++FDPLDGSSNID  V+ G
Sbjct:   66 KKLDEYANRILIHRMARSGVLCAMASEENADIIEIPHGLPQGNYIIIFDPLDGSSNIDVNVNIG 129          

HSP 2 Score: 36.5798 bits (83), Expect = 7.859e-11
Identity = 20/64 (31.25%), Postives = 35/64 (54.69%), Query Frame = 2
Query:  239 EIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +I    + LL Q+Q      + T + + +  + K I+  V +AG+ ++ G  G VNVQGE+ K+
Sbjct:    4 QITVTEHLLLHQKQIPGATGQFTHLFNELVLSAKIISREVNKAGLVDVLGFTGEVNVQGEEVKK 67          
The following BLAST results are available for this feature:
BLAST of CF417413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
F16PA_ACTSZ2.134e-1142.86Fructose-1,6-bisphosphatase class 1 OS=Actinobacil... [more]
F16PA_COLP32.136e-1154.84Fructose-1,6-bisphosphatase class 1 OS=Colwellia p... [more]
F16PA_PSYWF2.770e-1143.75Fructose-1,6-bisphosphatase class 1 OS=Psychrobact... [more]
F16A1_PSEHT3.600e-1150.00Fructose-1,6-bisphosphatase class 1 1 OS=Pseudoalt... [more]
F16PA_RHORT6.046e-1139.13Fructose-1,6-bisphosphatase class 1 OS=Rhodospiril... [more]
F16PA_DESDG6.055e-1142.19Fructose-1,6-bisphosphatase class 1 OS=Desulfovibr... [more]
F16PA_DESAD7.859e-1142.19Fructose-1,6-bisphosphatase class 1 OS=Desulfovibr... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-343 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417413 ID=CF417413; Name=CF417413; organism=Citrus sinensis; type=EST; length=695bp
GCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTC
TCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGT
GTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAA
GAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGA
CAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACG
CTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGA
GCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTT
CTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACTGGAATTCAGGGTGCT
GTCAATGTTCAAGGCGAGGACCAGAAGGAAGCTCGACGTCGTTTCAAATG
AGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCG
TCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAA
CTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTG
CAGTGTCTACTGGNATCCATCTTTGGCATATACAGCCCAAATGATGAGTG
TCTTGCCGATATTGGTGATGATCCTACTCTGGGCAACACTGAACT
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