CF417413 | Citrus Genome Database

Overview


Name	CF417413
Unique Name	CF417413
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	695

Libraries


Library Name	Type
Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_NEIMF (Fructose-1,6-bisphosphatase class 1 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=fbp PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.029e-15
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV++N +  + L+++     +ASEEED  V+  E+  G Y+V+FDPLDGSSNID  +S G
Sbjct:   61 QKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGEN--GRYLVLFDPLDGSSNIDVNISVG 122

HSP 2 Score: 43.5134 bits (101), Expect = 1.029e-15
Identity = 22/63 (34.92%), Postives = 38/63 (60.32%), Query Frame = 2

Query:  242 IETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++TLT +L +  Q   +   L  VL S+ +AC +I + V+   ++ + G+ G  N+QGEDQK+
Sbjct:    1 MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGALAGVLGMAGTGNIQGEDQKK 63

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_NEIMA (Fructose-1,6-bisphosphatase class 1 OS=Neisseria meningitidis serogroup A GN=fbp PE=3 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.029e-15
Identity = 30/64 (46.88%), Postives = 45/64 (70.31%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV++N +  + L+++     +ASEEED  V+  E+  G Y+V+FDPLDGSSNID  +S G
Sbjct:   61 QKKLDVIANNIMIDTLKANPAVAGLASEEEDSFVSAGEN--GRYLVLFDPLDGSSNIDVNISVG 122

HSP 2 Score: 43.5134 bits (101), Expect = 1.029e-15
Identity = 22/63 (34.92%), Postives = 38/63 (60.32%), Query Frame = 2

Query:  242 IETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            ++TLT +L +  Q   +   L  VL S+ +AC +I + V+   ++ + G+ G  N+QGEDQK+
Sbjct:    1 MDTLTRFLPEHLQQNQLPEALGGVLLSVVSACTEINAKVRLGALAGVLGMAGTGNIQGEDQKK 63

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16A1_DECAR (Fructose-1,6-bisphosphatase class 1 1 OS=Dechloromonas aromatica (strain RCB) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 59.3066 bits (142), Expect = 1.336e-15
Identity = 30/69 (43.48%), Postives = 42/69 (60.87%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++  +     G    +ASEE D+P  V   +  G Y++ FDPLDGSSNID  VS G
Sbjct:   61 QGEAQKKLDVLSNDILLDANEWGGHLAAMASEEMDLPHLVPHRFPKGEYLLTFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 44.2838 bits (103), Expect = 1.336e-15
Identity = 21/62 (33.87%), Postives = 40/62 (64.52%), Query Frame = 2

Query:  248 TLTNWLLKQEQS-GVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL  +L +++++ GVI  +L +++  +S AC+ I+  + + G+  + G  G+ NVQGE QK+
Sbjct:    6 TLARYLTEEQRNKGVITGDLKLLIEVVSRACQAISIAIGKGGLGGVLGEAGSDNVQGEAQKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_POLSJ (Fructose-1,6-bisphosphatase class 1 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.736e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   61 QGEVQKKLDIIANEVLIEANEWGGHLAAMASEEMDSIYLVPNRYPQGEYLLLFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 45.8246 bits (107), Expect = 1.736e-15
Identity = 23/62 (37.10%), Postives = 40/62 (64.52%), Query Frame = 2

Query:  248 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++Q++  G I A+L ++L  ++ ACK I+  V +  +  + G  G+ NVQGE QK+
Sbjct:    6 SLTRYLVEQQRREGHIPAQLRLLLEVVARACKGISQSVNKGALGGVLGTAGSENVQGEVQKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_AZOVD (Fructose-1,6-bisphosphatase class 1 OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.736e-15
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVMSNEILLEANEWGGHLAGMASEEMDSAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 1.736e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2

Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSHNTPADLRFLIEVVARACKEISHAVSKGALGGVLGSMGTENVQGEVQKK 65

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16A2_METPP (Fructose-1,6-bisphosphatase class 1 2 OS=Methylibium petroleiphilum (strain PM1) GN=fbp2 PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 1.736e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   61 QGEVQKKLDIIANEVLIEANEWGGALAAMASEEMDSIYVVPNRYPQGEYLLLFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 45.8246 bits (107), Expect = 1.736e-15
Identity = 24/62 (38.71%), Postives = 39/62 (62.90%), Query Frame = 2

Query:  248 TLTNWLLK-QEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++ Q + G I A+L ++L  ++ ACK IA  V +  +  + G  G+ NVQGE QK+
Sbjct:    6 SLTQYLVEEQRERGRIPAQLRLLLEVVARACKSIAISVNKGALGGVLGSAGSENVQGEVQKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_DELAS (Fructose-1,6-bisphosphatase class 1 OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 1.736e-15
Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYS-GNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD+++NEV        G    +ASEE +    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   61 QGEVQKKLDIIANEVLIEANEWGGHLAAMASEEMEGIYLVPNRYPHGEYLLMFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 48.1358 bits (113), Expect = 1.736e-15
Identity = 23/62 (37.10%), Postives = 42/62 (67.74%), Query Frame = 2

Query:  248 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++Q++  G+I  +L ++L  ++ ACK+I+  V +  I ++ G  G+ NVQGE QK+
Sbjct:    6 SLTRYLVEQQRVDGLIPGQLRLLLEVVARACKRISQSVNKGAIGDVLGTAGSENVQGEVQKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_VEREI (Fructose-1,6-bisphosphatase class 1 OS=Verminephrobacter eiseniae (strain EF01-2) GN=fbp PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 1.736e-15
Identity = 29/69 (42.03%), Postives = 39/69 (56.52%), Query Frame = 3

Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLD+++N V        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   61 QGEVQKKLDIIANGVLIEANEWGGHLAAMASEEMDGIYLVPHRYPQGEYLLLFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 48.9062 bits (115), Expect = 1.736e-15
Identity = 23/62 (37.10%), Postives = 43/62 (69.35%), Query Frame = 2

Query:  248 TLTNWLLKQEQSG-VIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++Q+++G +I A+L ++L  ++ ACK I+  V +  + ++ G  G+ NVQGE QK+
Sbjct:    6 SLTRYLVEQQRAGGLIPAQLRLLLEVVARACKSISHAVSKGALGDVLGTAGSENVQGEVQKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_CHLP8 (Fructose-1,6-bisphosphatase class 1 OS=Chlorobaculum parvum (strain NCIB 8327) GN=fbp PE=3 SV=1)

HSP 1 Score: 60.8474 bits (146), Expect = 1.737e-15
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 3

Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD+ +NE   N +   GR  I+ SEE +  +   +  SG Y+++FDPLDGSSNID  VS G
Sbjct:   66 KKLDLFANERLINAIGQHGRFAIMGSEENEETITPPKFESGEYVLLFDPLDGSSNIDVNVSVG 128

HSP 2 Score: 42.3578 bits (98), Expect = 1.737e-15
Identity = 20/59 (33.90%), Postives = 41/59 (69.49%), Query Frame = 2

Query:  254 TNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +++L +Q+    I++E+T +L+ ++ A K +   V RAG++++ G+ G+ NVQGE+ K+
Sbjct:    9 SHFLQQQKLYPEINSEVTGLLNDVAFAAKLVRREVVRAGLADILGLAGSTNVQGEEVKK 67

[Close]

BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16A1_POLNA (Fructose-1,6-bisphosphatase class 1 1 OS=Polaromonas naphthalenivorans (strain CJ2) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 2.932e-15
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 3

Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   65 QKKLDIIANEVLIEANEWGGHLAAMASEEMDDIYVVPNRYPQGEYLLMFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 45.4394 bits (106), Expect = 2.932e-15
Identity = 22/62 (35.48%), Postives = 40/62 (64.52%), Query Frame = 2

Query:  248 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++Q++  G I  EL +++  ++ ACK I+  V +  + ++ G  G+ NVQGE QK+
Sbjct:    6 SLTRYLVEQQRIDGHIPPELRLLIEVVARACKSISQAVNKGALGDVMGSAGSENVQGEIQKK 67

The following BLAST results are available for this feature:

BLAST of CF417413 vs. ExPASy Swiss-Prot

BLAST of CF417413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237


Match Name	E-value	Identity	Description
F16PA_NEIMF	1.029e-15	46.88	Fructose-1,6-bisphosphatase class 1 OS=Neisseria m...	[more]
F16PA_NEIMA	1.029e-15	46.88	Fructose-1,6-bisphosphatase class 1 OS=Neisseria m...	[more]
F16A1_DECAR	1.336e-15	43.48	Fructose-1,6-bisphosphatase class 1 1 OS=Dechlorom...	[more]
F16PA_POLSJ	1.736e-15	43.48	Fructose-1,6-bisphosphatase class 1 OS=Polaromonas...	[more]
F16PA_AZOVD	1.736e-15	44.93	Fructose-1,6-bisphosphatase class 1 OS=Azotobacter...	[more]
F16A2_METPP	1.736e-15	43.48	Fructose-1,6-bisphosphatase class 1 2 OS=Methylibi...	[more]
F16PA_DELAS	1.736e-15	42.03	Fructose-1,6-bisphosphatase class 1 OS=Delftia aci...	[more]
F16PA_VEREI	1.736e-15	42.03	Fructose-1,6-bisphosphatase class 1 OS=Verminephro...	[more]
F16PA_CHLP8	1.737e-15	46.03	Fructose-1,6-bisphosphatase class 1 OS=Chlorobacul...	[more]
F16A1_POLNA	2.932e-15	46.15	Fructose-1,6-bisphosphatase class 1 1 OS=Polaromon...	[more]

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Properties


Property Name	Value
Genbank description	USDA-FP_115000-343 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H10 5, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF417413 ID=CF417413; Name=CF417413; organism=Citrus sinensis; type=EST; length=695bp
GCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTC
TCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGT
GTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAA
GAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGA
CAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACG
CTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGA
GCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTT
CTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACTGGAATTCAGGGTGCT
GTCAATGTTCAAGGCGAGGACCAGAAGGAAGCTCGACGTCGTTTCAAATG
AGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCG
TCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAA
CTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTG
CAGTGTCTACTGGNATCCATCTTTGGCATATACAGCCCAAATGATGAGTG
TCTTGCCGATATTGGTGATGATCCTACTCTGGGCAACACTGAACT