CF417413

Overview
NameCF417413
Unique NameCF417413
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length695
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPG (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain GB-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.932e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 2.932e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEP1 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.932e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 2.932e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEE4 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas entomophila (strain L48) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.6102 bits (135), Expect = 2.932e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 2.932e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_CHLTE (Fructose-1,6-bisphosphatase class 1 OS=Chlorobium tepidum GN=fbp PE=3 SV=1)

HSP 1 Score: 59.6918 bits (143), Expect = 2.933e-15
Identity = 29/63 (46.03%), Postives = 40/63 (63.49%), Query Frame = 3 
Query:  426 RKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            +KLD+ +NE   N +   GR  I+ SEE +  +   +  SG Y+++FDPLDGSSNID  VS G
Sbjct:   66 KKLDLFANERLINAIGQHGRFAIMGSEENEEIIKPPKFESGEYVLLFDPLDGSSNIDVNVSVG 128

HSP 2 Score: 42.743 bits (99), Expect = 2.933e-15
Identity = 20/59 (33.90%), Postives = 41/59 (69.49%), Query Frame = 2 
Query:  254 TNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +++L  Q++   I++E+T +L+ ++ A K +   V RAG++++ G+ G+ NVQGE+ K+
Sbjct:    9 SHFLQLQKRYPEINSEVTDLLNDVAFAAKLVRREVVRAGLADILGLAGSTNVQGEEVKK 67
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_MAGSA (Fructose-1,6-bisphosphatase class 1 OS=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.810e-15
Identity = 28/64 (43.75%), Postives = 42/64 (65.62%), Query Frame = 3 
Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESYSGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLDV++N++F +     G    +ASEE +   AV  +  G Y+++FDPLDGSSNID  +S G
Sbjct:   65 QKKLDVLANDIFLHMNALGGSYAGMASEELEDVHAVHGAADGKYLLLFDPLDGSSNIDVNISVG 128

HSP 2 Score: 45.8246 bits (107), Expect = 3.810e-15
Identity = 23/65 (35.38%), Postives = 40/65 (61.54%), Query Frame = 2 
Query:  236 YEIETLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            Y+  TLT++LL++++        T +++ I  ACK I+  V R  ++   G+ G+ NVQGE+QK+
Sbjct:    3 YKRITLTHFLLQEQRRLGGSGSFTALMTDIIFACKMISHEVNRGALAGNLGVAGSENVQGEEQKK 67
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEU5 (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas stutzeri (strain A1501) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.9954 bits (136), Expect = 3.811e-15
Identity = 31/69 (44.93%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SNE+        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVLSNEILLEANEWGGHLAGMASEEMDNAYQIPGKYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.0542 bits (105), Expect = 3.811e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK I+  V +  +  + G  G+ NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKAISHQVSKGALGGVLGSAGSENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPW (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain W619) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.811e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 3.811e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_PSEPK (Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas putida (strain KT2440) GN=fbp PE=3 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 3.811e-15
Identity = 30/69 (43.48%), Postives = 40/69 (57.97%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +   ++KLDV+SN++        G    +ASEE D    +   Y  G Y++VFDPLDGSSNID  VS G
Sbjct:   59 QGEVQKKLDVISNDILLEANEWGGHLAGMASEEMDNAYQIPGRYPKGAYLLVFDPLDGSSNIDVNVSVG 127

HSP 2 Score: 45.8246 bits (107), Expect = 3.811e-15
Identity = 21/61 (34.43%), Postives = 37/61 (60.66%), Query Frame = 2 
Query:  248 TLTNWLLKQEQSGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            TL+ +L++Q +S    A+L  ++  ++ ACK+I+  V +  +  + G  G  NVQGE QK+
Sbjct:    5 TLSRYLIEQTRSNNTPADLRFLIEVVARACKEISHHVSKGALGGVLGSMGTENVQGEVQKK 65
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16A1_RALME (Fructose-1,6-bisphosphatase class 1 1 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=fbp1 PE=3 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.951e-15
Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 3 
Query:  411 KARTRRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            +  T++KLDV++NEV  +     G    +ASEE D    +   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   60 QGETQQKLDVIANEVLLDANEWGGHLAAMASEEMDSFYEIPNRYPKGEYLLLFDPLDGSSNIDVNVSIG 128

HSP 2 Score: 42.743 bits (99), Expect = 4.951e-15
Identity = 19/62 (30.65%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:  248 TLTNWLLKQEQS-GVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L+++++    I+ EL +++  ++ ACK I++ V +  ++ + G  G  NVQGE Q++
Sbjct:    5 SLTRYLVEEQRKHNTIEPELRLLIEVVARACKAISNAVSKGALAGVLGSAGTGNVQGETQQK 66
[Close]
BLAST of CF417413 vs. ExPASy Swiss-Prot
Match: F16PA_ACIAC (Fructose-1,6-bisphosphatase class 1 OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=fbp PE=3 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 4.952e-15
Identity = 30/65 (46.15%), Postives = 39/65 (60.00%), Query Frame = 3 
Query:  423 RRKLDVVSNEVFSNCLRSSGRTGIIASEEEDVPVAVEESY-SGNYIVVFDPLDGSSNIDAAVSTG 614
            ++KLD+++NEV        G    +ASEE D    V   Y  G Y+++FDPLDGSSNID  VS G
Sbjct:   65 QKKLDIIANEVLIEANEWGGHLAAMASEEMDSIYVVPNRYPQGEYLLLFDPLDGSSNIDVNVSIG 129

HSP 2 Score: 44.2838 bits (103), Expect = 4.952e-15
Identity = 21/62 (33.87%), Postives = 40/62 (64.52%), Query Frame = 2 
Query:  248 TLTNWLLKQEQ-SGVIDAELTIVLSSISTACKQIASLVQRAGISNLTGIQGAVNVQGEDQKE 430
            +LT +L++Q++  G+I ++L ++L  ++ ACK I+  V +  +  + G   + NVQGE QK+
Sbjct:    6 SLTRYLVEQQRVDGLIPSQLRLLLEVVARACKHISHAVNKGALGGVLGSASSENVQGEIQKK 67
The following BLAST results are available for this feature:
BLAST of CF417413 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 237
Match NameE-valueIdentityDescription
F16PA_PSEPG2.932e-1543.48Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEP12.932e-1543.48Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEE42.932e-1543.48Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_CHLTE2.933e-1546.03Fructose-1,6-bisphosphatase class 1 OS=Chlorobium ... [more]
F16PA_MAGSA3.810e-1543.75Fructose-1,6-bisphosphatase class 1 OS=Magnetospir... [more]
F16PA_PSEU53.811e-1544.93Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEPW3.811e-1543.48Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16PA_PSEPK3.811e-1543.48Fructose-1,6-bisphosphatase class 1 OS=Pseudomonas... [more]
F16A1_RALME4.951e-1544.93Fructose-1,6-bisphosphatase class 1 1 OS=Ralstonia... [more]
F16PA_ACIAC4.952e-1546.15Fructose-1,6-bisphosphatase class 1 OS=Acidovorax ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-343 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417413 ID=CF417413; Name=CF417413; organism=Citrus sinensis; type=EST; length=695bp
GCAGAGGGCCAAAATGGTTGCAGCAGCAGCGACAGCATCATCACAGCTTC
TCTTTTCAAGCTCTCACTCTTTCTCTCGGCTCTCTCCTTACCAAATATGT
GTCTTCGACTCCAAAGCACTCGTGTCGTCATGTCCCAGCAACGTTTTGAA
GAGAAGACATGTTGGTGTTGCTGCTGGGGTTCGGTGCATGGCTGTTGGGA
CAACATCGGAGGTTGCAACCAAGAAGAGAAGTTCGTATGAGATTGAAACG
CTGACAAACTGGCTGTTGAAGCAAGAACAGTCTGGCGTTATTGATGCTGA
GCTCACTATTGTGCTTTCCAGCATTTCAACGGCGTGCAAGCAGATTGCTT
CTTTGGTGCAAAGAGCTGGCATTTCCAACTTGACTGGAATTCAGGGTGCT
GTCAATGTTCAAGGCGAGGACCAGAAGGAAGCTCGACGTCGTTTCAAATG
AGGTGTTCTCAAACTGTTTGAGATCAAGTGGGCGAACCGGGATTATAGCG
TCAGAGGAAGAGGATGTACCAGTGGCGGTAGAAGAGAGCTACTCTGGAAA
CTATATTGTAGTTTTTGATCCACTTGATGGATCATCCAACATTGATGCTG
CAGTGTCTACTGGNATCCATCTTTGGCATATACAGCCCAAATGATGAGTG
TCTTGCCGATATTGGTGATGATCCTACTCTGGGCAACACTGAACT
back to top