CF417415

Overview
NameCF417415
Unique NameCF417415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.138e-51
Identity = 102/173 (58.96%), Postives = 119/173 (68.79%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLG 520
            F+  C I GT+DFIFGNAA V QN  ++ARKPN G K   TAQ R   +Q TGI I   RI A  DL PV+ +F  YLGRPW++YSRTVI++S I DLIHPAGW E   +FAL TL+YGE+ N G GA  + RV W GFR I + TEA  FT G FI GS+WL STG PFSLG
Sbjct:  359 FYRECDIYGTIDFIFGNAAVVFQNSSLYARKPNPGHKIAFTAQSRNQSDQPTGISILNCRILAAPDLIPVKENFKAYLGRPWRKYSRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 202.986 bits (515), Expect = 1.138e-51
Identity = 95/174 (54.60%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C + GTVDFIFGNAA VLQNC+++ R+P  GQ N VTAQGRTDPNQNTG  I    I    DL     +  TYLGRPWKEYSRTV+MQ+ I   + P+GW+ W G+FAL+TL+Y E+ N+G G+ T+ RV W G+ VI +AT+A  FT  +F+ G  W+G TG PF  GL
Sbjct:  386 FYRECDVYGTVDFIFGNAAVVLQNCNLYPRQPRKGQSNEVTAQGRTDPNQNTGTAIHGCTIRPADDLATSNYTVKTYLGRPWKEYSRTVVMQTYIDGFLEPSGWNAWSGDFALSTLYYAEYNNTGPGSDTTNRVTWPGYHVI-NATDASNFTVTNFLVGEGWIGQTGVPFVGGL 558          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.632e-51
Identity = 97/172 (56.40%), Postives = 122/172 (70.93%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQ-GSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 514
            F+ +C I+GTVDFIFG+A  V QNC I A+K    QKN +TAQGR DPN+ TGI IQ   I A SDL+     S PTYLGRPWK YSRTVIMQS ++++I P GW EW+G+FALN+LFYGE+ N G GAG   RVKW G++V   +T+A+ +T   FI G+ WL STG  ++
Sbjct:  346 FYRDCKISGTVDFIFGDATVVFQNCQILAKKGLPNQKNSITAQGRKDPNEPTGISIQFCNITADSDLEAASVNSTPTYLGRPWKLYSRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYT 517          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 9.632e-51
Identity = 94/174 (54.02%), Postives = 124/174 (71.26%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F  NC I GTVDFIFG+A A+LQNC+I+ARKP SGQKN +TAQ R +P++ TG VIQ S +   S+         TYLGRPW+ +SRTV M+ ++  L+ PAGW  W G+FAL+TL+YGE+ N+GAGA  SGRVKW G+ VI + TEA+ FT  +F+ G+ W+ +TG P + GL
Sbjct:  390 FLRNCNIYGTVDFIFGDATAILQNCNIYARKPMSGQKNTITAQSRKEPDETTGFVIQSSTVATASE---------TYLGRPWRSHSRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 2.146e-50
Identity = 96/174 (55.17%), Postives = 118/174 (67.82%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            FF  C+I GTVDFIFG+A AV Q+C I A++    QKN +TAQGR DPN+ TG  IQ S I A +DL     +  TYLGRPWK YSRTV MQ+ ++D I+P GW EW+GNFAL+TL+YGE+ NSG GA    RVKW G+ V+ ++ EA  FT    I G+ WL STG  F  GL
Sbjct:  352 FFRECIITGTVDFIFGDATAVFQSCQIKAKQGLPNQKNSITAQGRKDPNEPTGFTIQFSNIAADTDLLLNLNTTATYLGRPWKLYSRTVFMQNYMSDAINPVGWLEWNGNFALDTLYYGEYMNSGPGASLDRRVKWPGYHVLNTSAEANNFTVSQLIQGNLWLPSTGITFIAGL 525          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 2.802e-50
Identity = 101/174 (58.05%), Postives = 116/174 (66.67%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+    I GTVDFIFGN+A V Q+C+I ARKP  GQ+N VTAQGR++P QNTGI IQ  RI A S          TYLGRPWKEYSRTV+MQS I   IHP+GW  W G F L +LFYGE+ NSG G+  SGRVKW G     + TEA+ FT  SFI G+ WL STG  F  GL
Sbjct:  352 FYRETDITGTVDFIFGNSAVVFQSCNIAARKPLPGQRNFVTAQGRSNPGQNTGIAIQNCRITAES---------MTYLGRPWKEYSRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 8.154e-50
Identity = 95/174 (54.60%), Postives = 120/174 (68.97%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFIFG+A+ V QNC ++AR+PN  QK + TAQGR +  + TGI I  SRI A  DL PVQ +F  YLGRPW+ YSRTVIM+S I DL+ PAGW +W  +FAL TL+YGE+ N G G+  + RV+W GF+ I +  EA  F+ G FI G+ WL ST  PF+L L
Sbjct:  345 FYRECDIYGTVDFIFGDASVVFQNCSLYARRPNPNQKIIYTAQGRENSREPTGISIISSRILAAPDLIPVQANFKAYLGRPWQLYSRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 195.282 bits (495), Expect = 2.372e-49
Identity = 92/174 (52.87%), Postives = 119/174 (68.39%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFIFGNAA V Q+C+++ R+P   Q N +TAQGRTDPNQNTGI I    I    DL     +  TYLGRPWKEYSRTV MQS I +++ P GW EW+G+FAL+TL+Y E+ N+G+G+ T+ RV W G+ VI S T+A  FT  +F+ G  W+  +G P+  GL
Sbjct:  399 FYRECDIYGTVDFIFGNAAVVFQDCNLYPRQPMQNQFNAITAQGRTDPNQNTGISIHNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 192.971 bits (489), Expect = 1.177e-48
Identity = 95/174 (54.60%), Postives = 117/174 (67.24%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFIFGNAAA+ QNC+I+ARKP + QKN +TA GR DPNQNTGI I    I A  DL     S  T+LGRPWK YSRTV MQS I+D++ P GW EW+G   L+T++YGE+ N G GA T+ RV+W G+ ++  A EA  FT  +F  G +WL  T  PF  GL
Sbjct:  443 FYRECDIYGTVDFIFGNAAAIFQNCNIYARKPMAKQKNAITAHGRLDPNQNTGISIINCTIKAAPDLAAEPKSAMTFLGRPWKPYSRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLLNLA-EAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.008e-48
Identity = 99/174 (56.90%), Postives = 115/174 (66.09%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+    I GTVDFIFGN+A V Q+C++ +RK +S Q N VTAQGR+DPNQNTGI I   RI          GS  TYLGRPWK+YSRTV+MQS I   IHP+GW  W  NFAL TL+YGE  NSG G+  SGRV W G+    + TEAQ FT   FI G+SWL STG  F  GL
Sbjct:  365 FYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQ-NYVTAQGRSDPNQNTGISIHNCRI---------TGSTKTYLGRPWKQYSRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
The following BLAST results are available for this feature:
BLAST of CF417415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME39_ARATH1.138e-5158.96Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME20_ARATH1.138e-5154.60Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE9.632e-5156.40Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME6_ARATH9.632e-5154.02Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME32_ARATH2.146e-5055.17Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME16_ARATH2.802e-5058.05Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME40_ARATH8.154e-5054.60Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME41_ARATH2.372e-4952.87Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME25_ARATH1.177e-4854.60Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME35_ARATH2.008e-4856.90Probable pectinesterase/pectinesterase inhibitor 3... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-345 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417415 ID=CF417415; Name=CF417415; organism=Citrus sinensis; type=EST; length=658bp
GTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTA
ATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAAT
TCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCA
AAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATT
TAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAG
GAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCA
CCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGAACACATTGT
TTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAACTTCAGGGAGA
GTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAGGCTCAAGC
TTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGGCTCCACTG
GTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAGTTTTAATTAAT
ATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTCAATTTGTAATA
TTTGATTGAGCGTGTCTTATTCGTGGCTTCGATCTCACAAATACTATTGT
GTGATTTA
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