CF417415

Overview
NameCF417415
Unique NameCF417415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:744..1401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.474e-48
Identity = 91/174 (52.30%), Postives = 114/174 (65.52%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C + GTVDFIFGNAA V QNC+++ RKP   Q N +TAQGR+DPNQNTG  IQ   I    DL     +  TYLGRPWKEYSRTV MQS I   + P GW EW+G+FAL+TL+Y E+ N+G G+ T+ RV W G+ VI S T+A  FT       + W+  TG P++ GL
Sbjct:  405 FYRECDVYGTVDFIFGNAAVVFQNCNLYPRKPMPNQFNAITAQGRSDPNQNTGTSIQNCTIKPADDLVSSNYTVKTYLGRPWKEYSRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 5.844e-48
Identity = 94/174 (54.02%), Postives = 117/174 (67.24%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GT+DFIFGNAAA+ QNC+I+ARKP + QKN VTA GRTDPNQ TGI I    IGA  DL     S  T+LGRPWK YSRTV +QS I+D++ P GW EW+G   L+T+ YGE+ N G GA TS RV+W G+ ++ +  +A  FT  +F  G +WL  T  PF  GL
Sbjct:  448 FYRECDIYGTIDFIFGNAAAIFQNCNIYARKPMANQKNAVTAHGRTDPNQKTGISIINCTIGAAPDLAADPKSTMTFLGRPWKPYSRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 9.968e-48
Identity = 91/174 (52.30%), Postives = 116/174 (66.67%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFIFG+   V QNC I A++    QKN +TAQGR D NQ +G  IQ S I A +DL P   +  TYLGRPWK YSRTV ++++++D++ P GW EW+ +FAL+TLFYGE  N G G+G S RVKW G+ V  ++ +A  FT   FI G+ WL STG  FS GL
Sbjct:  350 FYRECTITGTVDFIFGDGTVVFQNCQILAKRGLPNQKNTITAQGRKDVNQPSGFSIQFSNISADADLVPYLNTTRTYLGRPWKLYSRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 189.504 bits (480), Expect = 1.302e-47
Identity = 97/174 (55.75%), Postives = 117/174 (67.24%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+ +C I GT+DFIFGN AAVLQNC I+ R P   QK  +TAQGR  PNQNTG VIQ S + AT          PTYLGRPWK YSRTV M + ++ L+ P GW EW GNFAL+TL+YGE+ N G G  +SGRVKW G+ ++   T A +FT GSFI G  WL +TG  F+ GL
Sbjct:  378 FYRDCEIYGTIDFIFGNGAAVLQNCKIYTRVPLPLQKVTITAQGRKSPNQNTGFVIQNSYVLATQ---------PTYLGRPWKLYSRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRT-ALSFTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.947e-47
Identity = 91/173 (52.60%), Postives = 116/173 (67.05%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW--DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 514
            F+  C I GTVDFIFGNAA V QNC I  R P  GQ N++TAQGRTD  QNTGI I  S I    DLKPV  S  TY+GRPW  YSRTV++++ I  ++ P GW  W     + L+TLFY E++N G  + T  RV+WKGF V++ A++A AF+ G FIAG++WL  +G PF+
Sbjct:  365 FYRECYIYGTVDFIFGNAAVVFQNCIILPRLPLKGQANVITAQGRTDLFQNTGISIHNSIIIPAPDLKPVVRSVKTYMGRPWMMYSRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFT 537          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.461e-47
Identity = 92/175 (52.57%), Postives = 118/175 (67.43%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            ++ +C+I GTVDFIFG+AAA+ QNCDI  RK   GQKN VTAQGR D  Q TG VI    +    DLKPV+  F +YLGRPWK +SRTV+M+S+I D+I P GW  W + +FA++TL Y E++N G    T+ RVKW GFRV+ +  EA  FT G F+ G  W+ + G P  LGL
Sbjct:  434 YYRSCVIIGTVDFIFGDAAAIFQNCDIFIRKGLPGQKNTVTAQGRVDKFQTTGFVIHNCTVAPNEDLKPVKAQFKSYLGRPWKPHSRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQG-EWIQAIGSPVKLGL 606          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1)

HSP 1 Score: 187.193 bits (474), Expect = 6.461e-47
Identity = 89/175 (50.86%), Postives = 121/175 (69.14%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            ++ +C+I GT+DFIFG+AAA+ QNC+I  RK   GQKN VTAQGR D  Q TG V+   +I A  DLKPV+  + +YLGRPWK YSRT+IM+S I ++I P GW  W + +FA++TL+Y E+ N G+   T+ RVKW GF+VI +  EA  +T G F+ G  W+ ++G P  LGL
Sbjct:  439 YYRSCVIVGTIDFIFGDAAAIFQNCNIFIRKGLPGQKNTVTAQGRVDKFQTTGFVVHNCKIAANEDLKPVKEEYKSYLGRPWKNYSRTIIMESKIENVIDPVGWLRWQETDFAIDTLYYAEYNNKGSSGDTTSRVKWPGFKVI-NKEEALNYTVGPFLQG-DWISASGSPVKLGL 611          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 2.714e-45
Identity = 93/174 (53.45%), Postives = 115/174 (66.09%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            FF  C I GTVDFIFGNAAAVLQNC I AR P +G  N +TAQ R +PNQ TGIVI  S +     ++   G   TYLGRPW+ Y+RTV++ + +  LI P GW +WD   AL+TL+YGE+QNSG G+GT  RV W GF VI+   EA+ FT   FI  +SWL  T  PF++ L
Sbjct:  304 FFRECDIYGTVDFIFGNAAAVLQNCRIFARNPPNGV-NTITAQSRFNPNQTTGIVIHNSVVKGAPGVQ--LGGVKTYLGRPWRSYARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 179.874 bits (455), Expect = 1.031e-44
Identity = 92/174 (52.87%), Postives = 111/174 (63.79%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFIFGN+A+VLQ+C I  R+P  GQ+N +TAQGRTDPN NTGI I +  I    DL  V     T+LGRPWK +S TVIM S +   I   GW  W G+ A +T+FYGE++N+G GA T  RVKWKG R + S  EA  FT   FI G  WL +T  PF  GL
Sbjct:  393 FYRECTIIGTVDFIFGNSASVLQSCRILPRRPMKGQQNTITAQGRTDPNMNTGISIHRCNISPLGDLTDVM----TFLGRPWKNFSTTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.347e-44
Identity = 87/171 (50.88%), Postives = 113/171 (66.08%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 514
            F+ +C+I GTVDFIFGNAA V Q C+I  R+P  GQ+N +TAQGR DPNQNTGI I    I    +L  +Q    T+LGRPWK++S TVIM+S +   I+P GW  W G+ A +T+FY E+ NSG GA T  RVKW+G +   +  EA  FT   FI G++WL +T  PF+
Sbjct:  395 FYRDCVILGTVDFIFGNAAVVFQKCEILPRRPMKGQQNTITAQGRKDPNQNTGISIHNCTIKPLDNLTDIQ----TFLGRPWKDFSTTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFN 561          
The following BLAST results are available for this feature:
BLAST of CF417415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME7_ARATH4.474e-4852.30Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME47_ARATH5.844e-4854.02Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME44_ARATH9.968e-4852.30Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME22_ARATH1.302e-4755.75Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME60_ARATH4.947e-4752.60Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME45_ARATH6.461e-4752.57Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME13_ARATH6.461e-4750.86Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME38_ARATH2.714e-4553.45Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME24_ARATH1.031e-4452.87Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME46_ARATH1.347e-4450.88Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-345 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417415 ID=CF417415; Name=CF417415; organism=Citrus sinensis; type=EST; length=658bp
GTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTA
ATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAAT
TCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCA
AAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATT
TAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAG
GAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCA
CCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGAACACATTGT
TTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAACTTCAGGGAGA
GTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAGGCTCAAGC
TTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGGCTCCACTG
GTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAGTTTTAATTAAT
ATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTCAATTTGTAATA
TTTGATTGAGCGTGTCTTATTCGTGGCTTCGATCTCACAAATACTATTGT
GTGATTTA
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