CF417415

Overview
NameCF417415
Unique NameCF417415
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13335 contig Csv1_Contig13335:744..1401. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.759e-44
Identity = 82/171 (47.95%), Postives = 116/171 (67.84%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 514
            F+ NC ++GT+DF+FG+A AV QNC+   R+P   Q+ +VTAQGR D  + TGIVI  SRI   +   PV+     +LGRPWKE+SRT+IM + I D+I P GW +W+  FALNTLFY E++N G G+G   RV+W+G + I S   A+ F PG+F+ G++W+  T  P++
Sbjct:  530 FYRNCRVSGTIDFVFGDAKAVFQNCEFVIRRPMEHQQCIVTAQGRKDRRETTGIVIHNSRITGDASYLPVKAKNRAFLGRPWKEFSRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPYN 699          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 6.686e-44
Identity = 82/170 (48.24%), Postives = 114/170 (67.06%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 511
            FF +C ++GTVDFIFG+   VLQNC+I  RKP   Q  M+TAQGR+D  ++TG+V+Q   I       PV+     YLGRPWKE+SRT+IM ++I D+I PAGW  W+G+FALNTL+Y E++N+G G+  + RVKW G + + S  +A  FTP  F+ G+ W+     P+
Sbjct:  398 FFRDCTVSGTVDFIFGDGIVVLQNCNIVVRKPMKSQSCMITAQGRSDKRESTGLVLQNCHITGEPAYIPVKSINKAYLGRPWKEFSRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 1.945e-43
Identity = 85/174 (48.85%), Postives = 108/174 (62.07%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+ +C I+GT+DF+FG+AAAV QNC +  RKP   Q   +TA GR DP ++TG V+Q   I    D   V+    TYLGRPWKEYSRT+IM + I D + P GW  W G F LNTLFY E QN+G GA  + RV W G + + S  E   FTP  +I G +W+   G P+ LGL
Sbjct:  390 FYRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLLNQACPITAHGRKDPRESTGFVLQGCTIVGEPDYLAVKEQSKTYLGRPWKEYSRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKL-SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 174.481 bits (441), Expect = 4.334e-43
Identity = 80/171 (46.78%), Postives = 114/171 (66.67%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFS 514
            F+ +C ++GTVDFIFG+A  +LQNC I  RKPN GQ  MVTAQGR++  ++TG+V+    I       P++     YLGRPWKE+SRT+IM+++I D+I PAGW  W G+FAL TL+Y EH N+G G+  + RVKW G + +T   +A  +T   F+ G +W+  T  P++
Sbjct:  396 FYRDCTVSGTVDFIFGDAKCILQNCKIVVRKPNKGQTCMVTAQGRSNVRESTGLVLHGCHITGDPAYIPMKSVNKAYLGRPWKEFSRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYT 565          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 9.654e-43
Identity = 81/174 (46.55%), Postives = 106/174 (60.92%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            FF +C I+GT+DF+FG+AAAV QNC +  RKP   Q   +TA GR DP ++TG V Q   I    D   V+ +   YLGRPWKEYSRT+IM + I D + P GW  W G+F L TLFY E QN+G G+  + RV W G + + S  +   FTP  +I G  W+   G P++ GL
Sbjct:  393 FFRDCTISGTIDFLFGDAAAVFQNCTLLVRKPLPNQACPITAHGRKDPRESTGFVFQGCTIAGEPDYLAVKETSKAYLGRPWKEYSRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 1.394e-41
Identity = 84/174 (48.28%), Postives = 106/174 (60.92%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFI GNAAAV Q C I AR+PN GQ N +TAQ R   +  +G  IQ   I A+SDL     +  TYLGRPW+ +S   ++QS I DL+ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  +  P+  GL
Sbjct:  353 FYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSRETKDDKSGFSIQNCNITASSDLDTA--TVKTYLGRPWRIFSTVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.821e-41
Identity = 87/171 (50.88%), Postives = 108/171 (63.16%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNF-ALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPF 511
            F+ +C I GT+DFIFGNAA V Q+C I  R+P   Q N +TAQG+ DPNQNTGI+IQKS I    +      + PTYLGRPWK++S TVIMQS I  L++P GW  W  N     T+FY E+QNSG GA  S RVKW G++   +   A+ FT  SFI G  WL +    F
Sbjct:  411 FYRDCDITGTIDFIFGNAAVVFQSCKIMPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTITPFGN----NLTAPTYLGRPWKDFSTTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQF 577          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.821e-41
Identity = 85/174 (48.85%), Postives = 106/174 (60.92%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GTVDFI GNA AV Q C I AR+P  GQ N++TAQ R   +  +G  IQK  I A+SDL     +  TYLGRPW+ +S   +MQS I DL+ PAGW  W+G   L+TL Y E+QN G GA TS RVKW GF+V+    +A  FT    + G +WL  T  P+  GL
Sbjct:  353 FYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRAFKDIYSGFTIQKCNITASSDLDTT--TVKTYLGRPWRIFSTVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 9.036e-41
Identity = 80/174 (45.98%), Postives = 112/174 (64.37%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523
            F+  C I GT+D+IFGNAA V Q C+I ++ P  GQ  ++TAQ R   +++TGI +Q   I A+ DL        +YLGRPW+E+SRTV+M+S I + I  +GW +W+G  AL+TL+YGE+ N+G G+ T  RV W GF ++    +A  FT   FI G  WLGST FP+  G+
Sbjct:  375 FYRECDIYGTIDYIFGNAAVVFQGCNIVSKLPMPGQFTVITAQSRDTQDEDTGISMQNCSILASEDLFNSSNKVKSYLGRPWREFSRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME_PETIN (Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 2.013e-40
Identity = 85/176 (48.30%), Postives = 104/176 (59.09%), Query Frame = 2
Query:    2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWD-GNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG-SSWLGSTGFPFSLGL 523
            F+ +C I GTVDFIFGN  AVLQNC +  RKP   Q  MVTAQGRT+P Q   IV+Q   I   +D   +     TYLGRPWKEYSRT+IMQS I   I P GW  W+  NF  +T +Y E+QN G GA    R+ WKGF+   +   AQ FT G +I    +WL     P+  G+
Sbjct:  196 FYRDCTITGTVDFIFGNGEAVLQNCKVIVRKPAQNQSCMVTAQGRTEPIQKGAIVLQNCEIKPDTDYFSLSPPSKTYLGRPWKEYSRTIIMQSYIDKFIEPEGWAPWNITNFGRDTSYYAEYQNRGPGAALDKRITWKGFQKGFTGEAAQKFTAGVYINNDENWLQKANVPYEAGM 371          
The following BLAST results are available for this feature:
BLAST of CF417415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 84
Match NameE-valueIdentityDescription
PME43_ARATH1.759e-4447.95Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME58_ARATH6.686e-4448.24Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME28_ARATH1.945e-4348.85Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME23_ARATH4.334e-4346.78Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME21_ARATH9.654e-4346.55Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME42_ARATH1.394e-4148.28Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU1.821e-4150.88Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]
PME19_ARATH1.821e-4148.85Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME12_ARATH9.036e-4145.98Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME_PETIN2.013e-4048.30Pectinesterase OS=Petunia integrifolia GN=PPE1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-345 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-004_H12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417415 ID=CF417415; Name=CF417415; organism=Citrus sinensis; type=EST; length=658bp
GTTCTTTGTGAACTGCTTAATTGCTGGCACGGTTGATTTCATTTTTGGTA
ATGCTGCAGCCGTGTTACAAAATTGTGACATCCATGCACGAAAGCCCAAT
TCCGGCCAAAAAAATATGGTCACAGCCCAAGGCAGGACTGACCCTAACCA
AAACACCGGCATTGTCATTCAAAAATCTAGGATTGGTGCCACCTCCGATT
TAAAACCGGTTCAGGGTAGTTTCCCGACGTACCTCGGCAGGCCCTGGAAG
GAGTACTCGAGGACGGTGATCATGCAGTCGTCGATTACTGACTTGATCCA
CCCTGCCGGGTGGCACGAGTGGGATGGTAACTTCGCGTTGAACACATTGT
TTTACGGAGAGCATCAGAACAGCGGAGCCGGTGCCGGAACTTCAGGGAGA
GTGAAATGGAAGGGATTTAGGGTTATTACAAGTGCTACCGAGGCTCAAGC
TTTTACTCCTGGAAGCTTCATTGCTGGTAGTAGCTGGCTGGGCTCCACTG
GTTTCCCATTCTCCCTTGGTTTGTAATATTCACTAGGAGTTTTAATTAAT
ATGTTTTGTATTAGTGGATCCATCGATCTCGGGTCTTTCAATTTGTAATA
TTTGATTGAGCGTGTCTTATTCGTGGCTTCGATCTCACAAATACTATTGT
GTGATTTA
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