CF417415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 7.650e-40 Identity = 81/174 (46.55%), Postives = 103/174 (59.20%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ C I GTVDFI GNA AV Q C I AR+P GQ N++TAQ R + +G IQ I +SDL + TYLGRPW+ +S ++QS I DL+ PAGW W G L+TL Y E+QN G GA TS RVKW GF+V+ +A FT + G +WL + P+ GL Sbjct: 326 FYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSRATKDVKSGFSIQNCNITTSSDLDTA--TVKTYLGRPWRRFSTVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME1_ARATH (Pectinesterase 1 OS=Arabidopsis thaliana GN=PME1 PE=2 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 3.553e-37 Identity = 74/168 (44.05%), Postives = 109/168 (64.88%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW-DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTG 502 F+ +C + GT+DFIFG+AA V Q C I R+P S Q N +TAQG+ DPNQ++G+ IQ+ I A ++ PTYLGRPWKE+S TVIM++ I ++ P+GW W G ++ YGE++N+G G+ + RVKW G++ + S EA FT + + G+ W+ +TG Sbjct: 418 FYRDCDVTGTIDFIFGSAAVVFQGCKIMPRQPLSNQFNTITAQGKKDPNQSSGMSIQRCTISANGNV-----IAPTYLGRPWKEFSTTVIMETVIGAVVRPSGWMSWVSGVDPPASIVYGEYKNTGPGSDVTQRVKWAGYKPVMSDAEAAKFTVATLLHGADWIPATG 580
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33 Identity = 70/145 (48.28%), Postives = 93/145 (64.14%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQK-NMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEW--DGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVI 427 F+ C I GT+DFIFGNAAAV Q+C+I R+P+ + N++ A GRTD QNTG + RI SDL PV+ + +YLGRPW++YSR ++M+S I D I GW W G+ L TL++GE +N G A S RV W+GF I Sbjct: 335 FYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGRTDQRQNTGFALHSCRIRTDSDLSPVKHKYSSYLGRPWRKYSRAIVMESYIDDAIAEGGWAGWLDSGDEVLKTLYFGEFKNYGPKARISKRVTWEGFHSI 479
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME26_ARATH (Putative pectinesterase/pectinesterase inhibitor 26 OS=Arabidopsis thaliana GN=PME26 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.383e-33 Identity = 73/166 (43.98%), Postives = 100/166 (60.24%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNF--ALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAG-SSWL 490 ++ NC + GTVDFIFG V Q C I R+P Q N +TA+G + NQNTGI I + I ++ + TYLGRPWK +S+TVIMQS I ++PAGW W+ + T+FY E++NSG G+ S RVKW G++ I+S EA FT F+ G +W+ Sbjct: 798 YYRNCDVTGTVDFIFGAGTVVFQGCSIRPRQPLPNQFNTITAEGTQEANQNTGISIHQCTISPNGNV-----TATTYLGRPWKLFSKTVIMQSVIGSFVNPAGWIAWNSTYDPPPRTIFYREYKNSGPGSDLSKRVKWAGYKPISSDDEAARFTVKYFLRGDDNWI 958
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME51_ARATH (Probable pectinesterase/pectinesterase inhibitor 51 OS=Arabidopsis thaliana GN=PME51 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.183e-32 Identity = 73/170 (42.94%), Postives = 96/170 (56.47%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDI----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFP----TYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSW 487 F+ NC I G VDFIFGN+AAV Q+C+I P G+KN VTAQGR DP+Q+TG V I T + + + P +LGRPWK+YSRTV + ++ LI P GW W G+FAL TL+YGE +N+G G+ S RV W ++ +FI W Sbjct: 380 FYKNCRIQGNVDFIFGNSAAVFQDCEILIAPRQINPEKGEKNAVTAQGRIDPSQSTGFVFLNCLINGTEEYMKLFKANPKVHKNFLGRPWKDYSRTVFIGCNLEALITPDGWLPWSGDFALKTLYYGESKNTGPGSDRSQRVSWSS---QIPDEHVHVYSVANFIQADEW 546
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 2.635e-32 Identity = 74/175 (42.29%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRT-DPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ NC+++GTVDFIFG +A V+QN I RK + GQ N VTA G GIV+Q RI L P + + TYLGRPWK++S TVIM + + DLI P GW WDG + Y E+ N G GA + RV W +V SA E FT +++ +W+ P ++GL Sbjct: 416 FYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNELGLGMKIGIVLQNCRIVPDRKLTPERLTVATYLGRPWKKFSTTVIMSTEMGDLIRPEGWKIWDGESFHKSCRYVEYNNRGPGAFANRRVNWA--KVARSAAEVNGFTAANWLGPINWIQEANVPVTIGL 588
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.495e-32 Identity = 71/175 (40.57%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDI-----HARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSD-LKPVQGS---FPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 499 F+ C I G VDFIFGN+AAV Q+CDI H++ G N +TA GR D +Q+TG V I T + +K Q + +LGRPWKE+SRTV + ++ LI P GW W+G+FAL TL+YGE++N+G G+ S RV W ++ +FI W +T Sbjct: 430 FYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGRIDASQSTGFVFLNCSINGTEEYMKEFQANPEGHKNFLGRPWKEFSRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSS---EIPEKHVDVYSVANFIQADEWASTT 601
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME_MEDSA (Pectinesterase/pectinesterase inhibitor OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.805e-31 Identity = 73/179 (40.78%), Postives = 100/179 (55.87%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFI------AGSSWLGSTGFPFSLG 520 F+ +C I+GT+DF+FG V QNC + R P GQ+ +VTA GR N + +V Q S L V +YLGRPWK+YS+ VIM S+I + P G+ W G+ T Y E+ N G GA T+ RVKW G +V+TS A+ + PG F A +W+ +G P+SLG Sbjct: 269 FYRDCSISGTIDFVFGERFGVFQNCKLVCRLPAKGQQCLVTAGGREKQNSASALVFQSSHFTGEPALTSVTPKV-SYLGRPWKQYSKVVIMDSTIDAIFVPEGYMPWMGSAFKETCTYYEYNNKGPGADTNLRVKWHGVKVLTSNVAAE-YYPGKFFEIVNATARDTWIVKSGVPYSLG 445
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 3.221e-30 Identity = 70/175 (40.00%), Postives = 99/175 (56.57%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ N +++GTVDFIFG +A V+QN I RK + GQ N VTA G GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I DLI P GW+EW G T Y E N G GA T+ RV W ++ SA E + FT +++ ++W+ P LGL Sbjct: 412 FYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADGNEKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANTAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVPVQLGL 584
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 130.954 bits (328), Expect = 5.495e-30 Identity = 73/175 (41.71%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDP-NQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ N +++GTVDFIFG +A V+QN I RK N GQ N VTA G GIV+Q RI L + +YLGRPWK++S TVI+ S I D+I P GW WDG + Y E+ N G GA T+ RV W ++ SA E FT +++ +W+ P +LGL Sbjct: 423 FYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADGNEKGLAMKIGIVLQNCRIVPDKKLAAERLIVESYLGRPWKKFSTTVIINSEIGDVIRPEGWKIWDGESFHKSCRYVEYNNRGPGAITNRRVNW--VKIARSAAEVNDFTVANWLGPINWIQEANVPVTLGL 595 The following BLAST results are available for this feature:
BLAST of CF417415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417415 ID=CF417415; Name=CF417415; organism=Citrus sinensis; type=EST; length=658bpback to top |