CF417415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 129.413 bits (324), Expect = 1.599e-29 Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTD-PNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ N +++GTVDFIFG +A V+QN I RK + GQ N VTA G GIV+ RI +L+ + + +YLGRPWK+++ TVI+ + I DLI P GW EW G T Y E N G GA T+ R W +V SA E + +T +++ ++W+ P LGL Sbjct: 416 FYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADGNEKGAAMKIGIVLHNCRIIPDKELEADKLTIKSYLGRPWKKFATTVIIGTEIGDLIKPEGWTEWQGEQNHKTAKYIEFNNRGPGAATTQRPPW--VKVAKSAAEVETYTVANWVGPANWIQEANVPVQLGL 588
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 8.773e-28 Identity = 67/175 (38.29%), Postives = 97/175 (55.43%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQ-NTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 523 F+ N +++GTVDFI G +A V+QN I RK + GQ N VTA G+ GIV+ RI A +L+ + + +YLGRPWK ++ T ++ + I DLI P GW+EW G T Y E N G GA + RV W ++ SA E + FT +++ ++W+ LGL Sbjct: 399 FYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGKQKGKAVKIGIVLHNCRIMADKELEADRLTVKSYLGRPWKPFATTAVIGTEIGDLIQPTGWNEWQGEKFHLTATYVEFNNRGPGANPAARVPWA--KMAKSAAEVERFTVANWLTPANWIQEANVTVQLGL 571
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME56_ARATH (Probable pectinesterase 56 OS=Arabidopsis thaliana GN=PME56 PE=2 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 9.699e-27 Identity = 56/104 (53.85%), Postives = 71/104 (68.27%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGW 313 F+ +C I GTVDFIFG AAAV Q C I ARKP GQ N++TAQ R + +G QK I A+SDL P++G+ T+LGRPW+ +SR V M+S I D+I AGW Sbjct: 183 FYRDCYITGTVDFIFGRAAAVFQYCQIEARKPGIGQTNILTAQSREEDTATSGFSFQKCNISASSDLTPIKGTVKTFLGRPWRAFSRVVFMESFIDDVIDRAGW 286
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME11_ARATH (Putative pectinesterase 11 OS=Arabidopsis thaliana GN=PME11 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 7.685e-24 Identity = 58/163 (35.58%), Postives = 85/163 (52.15%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 490 +F NC I G DFI G+A+++ + C +H+ PN+G +TAQ RT + +G ++ GS T+LGRPW YSR V S ++++ P GW++W + NT++YGE++ G GA RV+W S EA F FI G WL Sbjct: 185 YFKNCYIEGATDFICGSASSLYERCHLHSLSPNNGS---ITAQMRTSATEKSGFTFLGCKL---------TGSGSTFLGRPWGAYSRVVFAYSFFSNVVAPQGWNQWGDSTKENTVYYGEYKCYGPGADREQRVEWS---KQLSDEEATVFLSKDFIGGKDWL 332
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.506e-23 Identity = 61/163 (37.42%), Postives = 89/163 (54.60%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 490 ++ +C I G+VDFIFGNA ++ + C +HA G VTAQGR+ ++TG K ++ T L YLGR W +SR V + + ++I P GW+ W T+FYG+++ +GAGA GRV W R +T EA+ F +FI GS W+ Sbjct: 234 YYKDCYIEGSVDFIFGNALSLYEGCHVHAIADKLGA---VTAQGRSSVLEDTGFSFVKCKVTGTGVL---------YLGRAWGPFSRVVFAYTYMDNIILPRGWYNWGDPSREMTVFYGQYKCTGAGANYGGRVAWA--RELTD-EEAKPFLSLTFIDGSEWI 381
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.039e-20 Identity = 58/163 (35.58%), Postives = 75/163 (46.01%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 490 +F C I G VDFIFGNA ++ Q+CDIH+ G + A R ++TG I T + YLGR W YSRTV I D+I P GW +W + +GE+ G GA GRV W + +T E + F FI G WL Sbjct: 231 YFYQCYIQGNVDFIFGNAKSLYQDCDIHSTAKRYGA---IAAHHRDSETEDTGFSFVNCDISGTGQI---------YLGRAWGNYSRTVYSNCFIADIITPVGWSDWKHPERQRKVMFGEYNCRGRGAERGGRVPWS--KTLT-RDEVKPFLGREFIYGDQWL 378
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 5.155e-20 Identity = 59/168 (35.12%), Postives = 89/168 (52.98%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDI--HARKPNSGQKNM---VTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 490 +F +C I G++DFIFGNA ++ Q+C I A + + G K + VTA GR+ ++N+G IG T + +LGR W+ YSR V + +++TD+I P GW+ ++ T+FYGE+ SG GA S R + + T+ SFI G WL Sbjct: 233 YFKDCYIQGSIDFIFGNAKSLYQDCRIISMANQLSPGSKAVNGAVTANGRSSKDENSGFSFVNCTIGGTGHV---------WLGRAWRPYSRVVFVSTTMTDVIAPEGWNNFNDPSRDATIFYGEYNCSGPGADMSKRAP---YVQKLNETQVALLINTSFIDGDQWL 388
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME55_ARATH (Probable pectinesterase 55 OS=Arabidopsis thaliana GN=PME55 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.500e-19 Identity = 58/165 (35.15%), Postives = 77/165 (46.67%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWL 490 +F C I G VDFI G+ ++ Q+C I + G +TAQGRT+ N G V V G YLGR W+ YSR + S++TD++ P GW EW+ L Y EH G+G+ TS R KW SA+ Q SFI W+ Sbjct: 171 YFHRCTIQGAVDFILGSGQSIYQSCVIQVLGGQLGPGVTGYITAQGRTNANDANGFVFINCL---------VHGFGKAYLGRAWRPYSRVIFYNSNLTDVVDPLGWWEWNYQGYEKQLTYAEHGCFGSGSNTSRRAKWV---KKLSASAVQHLADLSFINRGGWV 323
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME15_ARATH (Probable pectinesterase 15 OS=Arabidopsis thaliana GN=PME15 PE=2 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.364e-19 Identity = 57/168 (33.93%), Postives = 82/168 (48.81%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIH--ARKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGST 499 FF C I G++DFIFGN ++ Q+C I+ A+ SG +TAQGR ++ +G +I GS LGR W Y+ V + ++ +I P GW+ W + T+ +GEH+ G GA RV F + +EA +F SFI G WL T Sbjct: 233 FFKECFIQGSIDFIFGNGRSLYQDCTINSIAKGNTSGVTGSITAQGRQSEDEQSGFSFVNCKI---------DGSGEILLGRAWGAYATVVFSNTYMSGIITPEGWNNWGDSTKEKTVTFGEHKCYGPGADYKERVL---FGKQLTDSEASSFIDVSFIDGDEWLRHT 388
BLAST of CF417415 vs. ExPASy Swiss-Prot
Match: PME29_ARATH (Probable pectinesterase 29 OS=Arabidopsis thaliana GN=PME29 PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 7.444e-19 Identity = 57/171 (33.33%), Postives = 78/171 (45.61%), Query Frame = 2 Query: 2 FFVNCLIAGTVDFIFGNAAAVLQNCDIHAR--KPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFP 508 +F C I G VDFIFG ++ Q+C I + G +TAQGRT+P G + V G+ +LGRPW+ YSR + S++TD++ P GW W+ N L + EH G+GA RVKW S + Q SFI W+ P Sbjct: 176 YFHRCTIQGAVDFIFGTGQSIYQSCVIQVLGGQLEPGLAGYITAQGRTNPYDANGFIFINCL---------VYGTGMAFLGRPWRGYSRVIFYNSNLTDVVVPEGWDAWNFVGHENQLVFAEHGCFGSGANIGRRVKWV---KKLSESAIQNLADLSFINRGGWVEDLPIP 334 The following BLAST results are available for this feature:
BLAST of CF417415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF417415 ID=CF417415; Name=CF417415; organism=Citrus sinensis; type=EST; length=658bpback to top |