CF417436
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417436 vs. ExPASy Swiss-Prot
Match: DRE1B_ORYSI (Dehydration-responsive element-binding protein 1B OS=Oryza sativa subsp. indica GN=DREB1B PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 2.405e-11 Identity = 46/120 (38.33%), Postives = 63/120 (52.50%), Query Frame = 3 Query: 99 TRHPVYXGXXXXRW-----GKWVSEITXPRXK-TRIWLGSFPXPEMAARAYDXAAYCLKGRKAQLNFPDKVEALPR-PSTRA---ARDIQEAAAKAAHA----GLISSEKSDVSESDGDD 416 TRHPVY G G+WV E+ P + +R+WLG+F E AARA+D AA L+GR A LNF D +P P++ A AR +++A A A A S ++ DGD+ Sbjct: 28 TRHPVYRGVRRRGGRPGAAGRWVCEVRVPGARGSRLWLGTFATAEAAARAHDAAALALRGRAACLNFADSAWRMPPVPASAALAGARGVRDAVAVAVEAFQRQSAAPSSPAETFADDGDE 147
BLAST of CF417436 vs. ExPASy Swiss-Prot
Match: DRE1I_ORYSJ (Dehydration-responsive element-binding protein 1I OS=Oryza sativa subsp. japonica GN=DREB1I PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.141e-11 Identity = 43/92 (46.74%), Postives = 56/92 (60.87%), Query Frame = 3 Query: 99 TRHPVYXGXXXX-RWGKWVSEITXP-RXKTRIWLGSFPXPEMAARAYDXAAYCLKGRKAQ-LNFPDK--VEALPRPST-RAARDIQEAAAKA 356 TRHPV+ G R G+WV E+ P R R+WLG+F + AARA+D A L+GR A LNF D + A+P P+T R A D+Q A A+A Sbjct: 50 TRHPVFRGVRRRGRAGRWVCEVRVPGRRGCRLWLGTFDAADAAARAHDAAMLALRGRAAACLNFADSAWLLAVPPPATLRCAADVQRAVARA 141
BLAST of CF417436 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 32/92 (34.78%), Postives = 48/92 (52.17%), Query Frame = 3 Query: 114 YXGXXXXRWGKWVSEITXPRXKTRIWLGSFPXPEMAARAYDXAAYCLKGRKAQLNFPDKVEALPRPSTRAARDIQEAAAKAAHAGLISSEKS 389 Y G WG+W +EI P R+WLG+F E AARAYD A ++G KA+LNFP++ + + + ++E ++SS S Sbjct: 25 YKGIRRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPS 116
BLAST of CF417436 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 6.997e-11 Identity = 34/81 (41.98%), Postives = 45/81 (55.56%), Query Frame = 3 Query: 114 YXGXXXXRWGKWVSEITXPRXKTRIWLGSFPXPEMAARAYDXAAYCLKGRKAQLNFPDKVEALPRPSTRAARDIQEAAAKA 356 + G WGKW +EI PR R+WLG+F E AARAYD A ++G+KA++NFP+ P+T R AKA Sbjct: 120 FRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPE------APTTAQKRRAGSTTAKA 194 The following BLAST results are available for this feature:
BLAST of CF417436 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417436 ID=CF417436; Name=CF417436; organism=Citrus sinensis; type=EST; length=636bpback to top |