CF417448

Overview
NameCF417448
Unique NameCF417448
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_HYDAT (60S ribosomal protein L15 OS=Hydra attenuata GN=RPL15 PE=2 SV=2)

HSP 1 Score: 240.736 bits (613), Expect = 5.249e-63
Identity = 122/193 (63.21%), Postives = 136/193 (70.47%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VL+SYW+ EDSTYK+FEV+LVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_CARAU (60S ribosomal protein L15 OS=Carassius auratus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 240.736 bits (613), Expect = 5.249e-63
Identity = 122/193 (63.21%), Postives = 136/193 (70.47%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VL+SYW+ EDSTYK+FEV+LVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVVLVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_SILME (60S ribosomal protein L15 OS=Silurus meridionalis GN=rpl15 PE=2 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 6.856e-63
Identity = 122/193 (63.21%), Postives = 136/193 (70.47%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGA KY+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV QLKF RS +S+AEERAGR  GGL+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P + WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGASKYMQELWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQLKFARSLQSIAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDMQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_MEGAM (60S ribosomal protein L15 OS=Megalobrama amblycephala GN=rpl15 PE=2 SV=3)

HSP 1 Score: 240.35 bits (612), Expect = 6.856e-63
Identity = 122/193 (63.21%), Postives = 136/193 (70.47%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ +LWRKKQS+VMRFL RVRCW+YRQ  S+ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQKLWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_ANGJA (60S ribosomal protein L15 OS=Anguilla japonica GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.58 bits (610), Expect = 1.169e-62
Identity = 121/193 (62.69%), Postives = 133/193 (68.91%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ   + R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H A+R DP   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSGLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAVRRDPDAQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.195 bits (609), Expect = 1.527e-62
Identity = 122/193 (63.21%), Postives = 135/193 (69.95%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ ELWRKKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  GGL+VL+SYW+ EDSTYK+FEVILVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_MONAL (60S ribosomal protein L15 OS=Monopterus albus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.995e-62
Identity = 121/193 (62.69%), Postives = 135/193 (69.95%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAY+Y+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  G L+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILIDPFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_HYPMO (60S ribosomal protein L15 OS=Hypophthalmichthys molitrix GN=rpl15 PE=2 SV=3)

HSP 1 Score: 238.81 bits (608), Expect = 1.995e-62
Identity = 122/193 (63.21%), Postives = 135/193 (69.95%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAYKY+ ELWRKKQS+VMRFL RVRCW+YRQ  S+ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VLNSYW+ EDSTYK+FEVIL+D  H AIR +P   WI K V KHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYKYMQELWRKKQSNVMRFLLRVRCWQYRQLSSLHRAPRPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLNSYWVGEDSTYKFFEVILIDTFHKAIRRNPDTQWITKAVRKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 238.039 bits (606), Expect = 3.402e-62
Identity = 121/193 (62.69%), Postives = 136/193 (70.47%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAY+Y+ +LWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGL+VL+SYW+ EDSTYK+FEVILVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
[Close]
BLAST of CF417448 vs. ExPASy Swiss-Prot
Match: RL15_EPICO (60S ribosomal protein L15 OS=Epinephelus coioides GN=rpl15 PE=2 SV=2)

HSP 1 Score: 238.039 bits (606), Expect = 3.402e-62
Identity = 121/193 (62.69%), Postives = 134/193 (69.43%), Query Frame = 2 
Query:    2 MGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLKVLNSYWINEDSTYKYFEVILVDAAHNAIRNDPRINWICKPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATW 577
            MGAY+Y+ ELWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  G L+VLNSYW+ EDSTYK+FEVILVD  H AIR +P   WI K VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W
Sbjct:    1 MGAYRYMQELWRKKQSDVMRFLLRVRCWQYRQLSNLHRAPRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGALRVLNSYWVGEDSTYKFFEVILVDTFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAW 192
The following BLAST results are available for this feature:
BLAST of CF417448 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_HYDAT5.249e-6363.2160S ribosomal protein L15 OS=Hydra attenuata GN=RP... [more]
RL15_CARAU5.249e-6363.2160S ribosomal protein L15 OS=Carassius auratus GN=... [more]
RL15_SILME6.856e-6363.2160S ribosomal protein L15 OS=Silurus meridionalis ... [more]
RL15_MEGAM6.856e-6363.2160S ribosomal protein L15 OS=Megalobrama amblyceph... [more]
RL15_ANGJA1.169e-6262.6960S ribosomal protein L15 OS=Anguilla japonica GN=... [more]
RL15_PARDA1.527e-6263.2160S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_MONAL1.995e-6262.6960S ribosomal protein L15 OS=Monopterus albus GN=r... [more]
RL15_HYPMO1.995e-6263.2160S ribosomal protein L15 OS=Hypophthalmichthys mo... [more]
RL15_PELFU3.402e-6262.6960S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_EPICO3.402e-6262.6960S ribosomal protein L15 OS=Epinephelus coioides ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-378 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D02 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417448 ID=CF417448; Name=CF417448; organism=Citrus sinensis; type=EST; length=681bp
AATGGGTGCATACAAGTACGTGTCGGAGCTATGGAGGAAGAAGCAGTCGG
ATGTGATGAGGTTCTTGCAGAGGGTGAGGTGCTGGGAGTACCGTCAGCAC
CCTTCCATCGTCCGCGTCACCCGTCCCACTCGCCCCGACAAGGCTCGCCG
CTTGGGCTACAAGGCCAAGCAGGGTTATGTCGTTTATCGTGTGCGTGTAA
GACGTGGAGGACGAAAGAGACCAGTTCCCAAGGGTATTGTATATGGTAAA
CCGACAAACCAGGGTGTCACTCAGCTTAAATTCCAGCGCAGCAAGCGTTC
AGTTGCTGAGGAACGTGCCGGTCGTAAGCTTGGTGGCCTTAAGGTTCTCA
ACTCATACTGGATCAATGAGGATTCAACTTACAAGTACTTTGAGGTAATC
CTGGTGGATGCTGCCCACAATGCAATCCGCAATGACCCCAGGATCAACTG
GATCTGTAAGCCTGTCCACAAGCACAGGGAGCTTCGTGGACTCACTTCTG
CTGGGAAGAAGTACAGAGGTCTCCGAGGAAAGGGTCACTTGCACCACAAG
GCACGACCTTCAAGAAGGGCAACCTGGNAAGAGGAACCAAACTCTCTCGC
TCAGGCGTTACCGTTAAACTTCTGTATTGNTTACTTTGTGTTTTTCACAT
TATCAACCTAGTTTAATTGCTGTTGAGTTTG
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