CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 4.016e-28
Identity = 68/174 (39.08%), Postives = 93/174 (53.45%), Query Frame = 3
Query:   39 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            F   + F    LQ  T++FS++N++G G  G VY+  LPD   +AVK+L     S   D  F   V  I    H N++ L G+C    +RLL+Y +  N +L   L         L W TR R+ALGAAR  EYLHE C P I+HR+ K+AN+LLD+D    V    FG   ++
Sbjct:  272 FGQLKRFAWRELQLATDNFSEKNVLGQGGFGKVYKGVLPDNTKVAVKRLTD-FESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGD--FGLAKLV 442          

HSP 2 Score: 28.1054 bits (61), Expect = 4.016e-28
Identity = 19/56 (33.93%), Postives = 35/56 (62.50%), Query Frame = 1
Query:  538 GLAPLIS---SGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L+    +   +Q+ G +    G+ APE+ S G  + ++DV+ +G+++LEL+T
Sbjct:  437 GLAKLVDVRRTNVTTQVRGTM----GHIAPEYLSTGKSSERTDVFGYGIMLLELVT 488          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.206e-28
Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGST 551
            + +A +++ T+ F +  +IG G  G VY+  L D   +AVK+      S+Q   EF   V  + + RH ++V L GYC E+ + +++YEY   GTL+D L+  D+ K  LSW  R+ + +GAAR L YLH      I+HR+ KSANILLDD+    V+      T
Sbjct:  475 YPLALIKEATDDFDESLVIGVGGFGKVYKGVLRDKTEVAVKR--GAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDD-KPRLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKT 636          

HSP 2 Score: 31.187 bits (69), Expect = 5.206e-28
Identity = 17/32 (53.12%), Postives = 24/32 (75.00%), Query Frame = 1
Query:  598 AYGYGAPEFESGIY-TCQSDVYSFGVVMLELL 690
            ++GY  PE+ +    T +SDVYSFGVVMLE++
Sbjct:  652 SFGYLDPEYLTRQQLTEKSDVYSFGVVMLEVV 683          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK28_ARATH (Cysteine-rich receptor-like protein kinase 28 OS=Arabidopsis thaliana GN=CRK28 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 5.220e-28
Identity = 57/149 (38.26%), Postives = 91/149 (61.07%), Query Frame = 3
Query:   69 SLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            +L+  T++FS EN +G G  GSVY+     G+ +AVK+L    +S Q D EF   +  + +++H N+V L G+C E  +R+L+YE+  N +L + +  D + +  L W  R +M  G AR L YLHE  +  I+HR+ K++NILLD ++
Sbjct:  353 TLKAATDNFSPENELGRGGFGSVYKGVFSGGQEIAVKRLS--CTSGQGDSEFKNEILLLAKLQHRNLVRLLGFCIEGQERILVYEFIKNASLDNFIF-DLKKRQLLDWGVRYKMIGGVARGLLYLHEDSRYRIIHRDLKASNILLDQEM 498          

HSP 2 Score: 38.1206 bits (87), Expect = 5.220e-28
Identity = 20/55 (36.36%), Postives = 35/55 (63.64%), Query Frame = 1
Query:  538 GLAPLISSGSVS--QLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L  +   S  + +  +   YGY APE+   G ++ ++DV+SFGV+++E++T
Sbjct:  506 GLAKLYDTDQTSTHRFTSKIAGTYGYMAPEYAIYGQFSVKTDVFSFGVLVIEIIT 560          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 6.844e-28
Identity = 57/170 (33.53%), Postives = 97/170 (57.06%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLP----------DGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            ++FT   L+  T +F  ++L+G G  G V++  +            G ++AVKKL  +    Q   E+L  VN + ++ H N+V+L GYC E   RLL+YE+   G+L++  H        L+W  R+++A+GAA+ L +LH+  +  +++R+FK+ANILLD +    +S
Sbjct:   69 KAFTFNELKNATRNFRPDSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKL--KTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAIGAAKGLTFLHD-AKSQVIYRDFKAANILLDAEFNSKLS 233          

HSP 2 Score: 47.7506 bits (112), Expect = 6.844e-28
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GLA    +G  + +S  ++  +GY APE+  +G  T +SDVYSFGVV+LELL+
Sbjct:  236 GLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLS 288          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: EXS_ARATH (Leucine-rich repeat receptor protein kinase EXS OS=Arabidopsis thaliana GN=EXS PE=1 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 7.414e-28
Identity = 67/175 (38.29%), Postives = 106/175 (60.57%), Query Frame = 3
Query:   63 IASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNIIRFS*SVVRT 587
            +  + + T+ FS++N+IG G  G+VY+A LP  K +AVKKL +  +  Q + EF+  +  + +++H N+V L GYC+   ++LL+YEY  NG+L   L +   +   L W+ R+++A+GAAR L +LH    P I+HR+ K++NILLD D    V+   FG   +I    S V T
Sbjct:  907 LGDIVEATDHFSKKNIIGDGGFGTVYKACLPGEKTVAVKKLSE--AKTQGNREFMAEMETLGKVKHPNLVSLLGYCSFSEEKLLVYEYMVNGSLDHWLRNQTGMLEVLDWSKRLKIAVGAARGLAFLHHGFIPHIIHRDIKASNILLDGDFEPKVAD--FGLARLISACESHVST 1077          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 8.847e-28
Identity = 60/163 (36.81%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   69 SLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNI 557
            ++Q  TN F++ N IG G  G VY+    +GK +AVK+L K  +S+Q + EF   V  + +++H N+V L G+  +  +R+L+YEY  N +L D L  D   +  L W  R  +  G AR + YLH+  +  I+HR+ K++NILLD D+   ++   FG   I
Sbjct:  345 TIQTATNDFAESNKIGRGGFGEVYKGTFSNGKEVAVKRLSK--NSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSL-DCLLFDPTKQTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIAD--FGMARI 502          

HSP 2 Score: 40.817 bits (94), Expect = 8.847e-28
Identity = 19/53 (35.85%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            G+A +         +  ++  YGY APE+   G ++ +SDVYSFGV++LE+++
Sbjct:  498 GMARIFGLDQTQDNTSRIVGTYGYMAPEYAMHGQFSMKSDVYSFGVLVLEIIS 550          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK31_ARATH (Putative cysteine-rich receptor-like protein kinase 31 OS=Arabidopsis thaliana GN=CRK31 PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 8.849e-28
Identity = 56/153 (36.60%), Postives = 92/153 (60.13%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            F   +++  T++FS+ N +G G  G VY+  LP+   +AVK+L   ++S Q   EF   V  + +++H N+V L G+C E  +++L+YE+ SN +L   L  D ++K+ L W  R  +  G  R L YLH+  +  I+HR+ K++NILLD D+
Sbjct:  327 FDFTTIEVATDNFSRNNKLGQGGFGEVYKGMLPNETEIAVKRLS--SNSGQGTQEFKNEVVIVAKLQHKNLVRLLGFCIERDEQILVYEFVSNKSLDYFLF-DPKMKSQLDWKRRYNIIGGVTRGLLYLHQDSRLTIIHRDIKASNILLDADM 476          

HSP 2 Score: 36.965 bits (84), Expect = 8.849e-28
Identity = 18/52 (34.62%), Postives = 32/52 (61.54%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELL 690
            G+A           +G ++  +GY  PE+ + G ++ +SDVYSFGV++LE++
Sbjct:  484 GMARNFRVDQTEDQTGRVVGTFGYMPPEYVTHGQFSTKSDVYSFGVLILEIV 535          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y3545_ARATH (Probable receptor-like protein kinase At3g55450 OS=Arabidopsis thaliana GN=At3g55450 PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 8.925e-28
Identity = 60/174 (34.48%), Postives = 99/174 (56.90%), Query Frame = 3
Query:   42 TTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPD----------GKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELK-NNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            TT +SF+   L+  T +F  ++++G G  G V+R  L +          G ++AVK+L+      Q   E+L  +N + ++ H N+V+L GYC E  QRLL+YE+   G+L++ L ++       LSW  RI++AL AA+ L +LH      +++R+ K++NILLD D    +S
Sbjct:   44 TTVKSFSFNELKLATRNFRSDSVVGEGGFGCVFRGWLDETTLTPTKSSSGLVIAVKRLNP--DGFQGHREWLTEINYLGQLSHPNLVKLIGYCLEDEQRLLVYEFMHKGSLENHLFANGNKDFKPLSWILRIKVALDAAKGLAFLHS-DPVKVIYRDIKASNILLDSDFNAKLS 214          

HSP 2 Score: 45.0542 bits (105), Expect = 8.925e-28
Identity = 26/52 (50.00%), Postives = 33/52 (63.46%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELL 690
            GLA     G  S +S  ++  +GY APE+ S G    +SDVYSFGVV+LELL
Sbjct:  217 GLARDGPMGEQSYVSTRVMGTFGYAAPEYVSTGHLNARSDVYSFGVVLLELL 268          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana GN=HSL1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 1.145e-27
Identity = 65/167 (38.92%), Postives = 90/167 (53.89%), Query Frame = 3
Query:   69 SLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKL-------------DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            S  +   S  ++N+IGAG  G VY+  L +G+ +AVK+L             +K      +D+ F   V  + +IRH NIV+L   C+    +LL+YEY  NG+L D+LHS       L W TR ++ L AA  L YLH    PPIVHR+ KS NIL+D D    V+
Sbjct:  668 SEHEILESLDEDNVIGAGASGKVYKVVLTNGETVAVKRLWTGSVKETGDCDPEKGYKPGVQDEAFEAEVETLGKIRHKNIVKLWCCCSTRDCKLLVYEYMPNGSLGDLLHSSKG--GMLGWQTRFKIILDAAEGLSYLHHDSVPPIVHRDIKSNNILIDGDYGARVA 832          

HSP 2 Score: 32.3426 bits (72), Expect = 1.145e-27
Identity = 16/31 (51.61%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  604 GYGAPEFESGIYTCQ-SDVYSFGVVMLELLT 693
            GY APE+   +   + SD+YSFGVV+LE++T
Sbjct:  858 GYIAPEYAYTLRVNEKSDIYSFGVVILEIVT 888          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y2232_ARATH (Probable receptor-like protein kinase At2g23200 OS=Arabidopsis thaliana GN=At2g23200 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 1.148e-27
Identity = 63/159 (39.62%), Postives = 95/159 (59.75%), Query Frame = 3
Query:   84 TNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEI-CQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNI 557
            TN+F ++ LIG G  G VY+A LPDG   A+K+   +  S Q   EF   +  + RIRH ++V L GYC E+ + +L+YE+   GTL++ L+  +    +L+W  R+ + +GAAR L+YLH    +  I+HR+ KS NILLD+     V+   FG + I
Sbjct:  485 TNNFDEQLLIGKGGFGYVYKAILPDGTKAAIKR--GKTGSGQGILEFQTEIQVLSRIRHRHLVSLTGYCEENSEMILVYEFMEKGTLKEHLYGSN--LPSLTWKQRLEICIGAARGLDYLHSSGSEGAIIHRDVKSTNILLDEHNIAKVAD--FGLSKI 637          

HSP 2 Score: 33.4982 bits (75), Expect = 1.148e-27
Identity = 18/41 (43.90%), Postives = 29/41 (70.73%), Query Frame = 1
Query:  571 SQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELL 690
            S +S ++   +GY  PE+ ++   T +SDVY+FGVV+LE+L
Sbjct:  643 SNISINIKGTFGYLDPEYLQTHKLTEKSDVYAFGVVLLEVL 683          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
Y5129_ARATH4.016e-2839.08Probable LRR receptor-like serine/threonine-protei... [more]
Y2393_ARATH5.206e-2838.18Probable receptor-like protein kinase At2g39360 OS... [more]
CRK28_ARATH5.220e-2838.26Cysteine-rich receptor-like protein kinase 28 OS=A... [more]
APK2B_ARATH6.844e-2833.53Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
EXS_ARATH7.414e-2838.29Leucine-rich repeat receptor protein kinase EXS OS... [more]
CRK8_ARATH8.847e-2836.81Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
CRK31_ARATH8.849e-2836.60Putative cysteine-rich receptor-like protein kinas... [more]
Y3545_ARATH8.925e-2834.48Probable receptor-like protein kinase At3g55450 OS... [more]
HSL1_ARATH1.145e-2738.92Receptor-like protein kinase HSL1 OS=Arabidopsis t... [more]
Y2232_ARATH1.148e-2739.62Probable receptor-like protein kinase At2g23200 OS... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
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