CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.036e-32
Identity = 66/168 (39.29%), Postives = 98/168 (58.33%), Query Frame = 3
Query:   54 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKN-NLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTN 554
            +FT+  ++  T++F     IG G  GSVY+ +L +GKL+AVK+L   A S+Q + EF+  +  I  ++H N+V+L G C E  Q +L+YEY  N  L   L   DE     L W+TR ++ LG A+ L +LHE  +  IVHR+ K++N+LLD DL   +S       N
Sbjct:  665 TFTLRQIKAATDNFDVTRKIGEGGFGSVYKGELSEGKLIAVKQLS--AKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLN 830          

HSP 2 Score: 38.1206 bits (87), Expect = 1.036e-32
Identity = 23/53 (43.40%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L   G+ + +S  +    GY APE+   G  T ++DVYSFGVV LE+++
Sbjct:  825 GLAKLNDDGN-THISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVS 876          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 1.755e-32
Identity = 69/172 (40.12%), Postives = 102/172 (59.30%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSD--DELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            R    + L + TN FS  ++IG G  G V++A L DG  +A+KKL +   S Q D EF+  +  + +I+H N+V L GYC    +RLL+YE+   G+L+++LH     E +  L W  R ++A GAA+ L +LH  C P I+HR+ KS+N+LLD D+   VS   FG   +I
Sbjct:  824 RKLKFSQLIEATNGFSAASMIGHGGFGEVFKATLKDGSSVAIKKLIRL--SCQGDREFMAEMETLGKIKHRNLVPLLGYCKIGEERLLVYEFMQYGSLEEVLHGPRTGEKRRILGWEERKKIAKGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDQDMEARVSD--FGMARLI 991          

HSP 2 Score: 35.4242 bits (80), Expect = 1.755e-32
Identity = 23/53 (43.40%), Postives = 30/53 (56.60%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            G+A LIS+         L    GY  PE+ +S   T + DVYS GVVMLE+L+
Sbjct:  986 GMARLISALDTHLSVSTLAGTPGYVPPEYYQSFRCTAKGDVYSIGVVMLEILS 1038          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 2.287e-32
Identity = 63/150 (42.00%), Postives = 88/150 (58.67%), Query Frame = 3
Query:   69 SLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKL----DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLD 506
            ++     S + EN+IG G  G VY+A++P+G ++AVKKL    D     +   D F   +  +  IRH NIV+L GYC+    +LL+Y Y  NG LQ +L  +     NL W TR ++A+GAA+ L YLH  C P I+HR+ K  NILLD
Sbjct:  764 TVNNIVTSLTDENVIGKGCSGIVYKAEIPNGDIVAVKKLWKTKDNNEEGESTIDSFAAEIQILGNIRHRNIVKLLGYCSNKSVKLLLYNYFPNGNLQQLLQGN----RNLDWETRYKIAIGAAQGLAYLHHDCVPAILHRDVKCNNILLD 909          

HSP 2 Score: 36.965 bits (84), Expect = 2.287e-32
Identity = 23/54 (42.59%), Postives = 35/54 (64.81%), Query Frame = 1
Query:  538 GLAPLI-SSGSVSQLSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLT 693
            GLA L+ +S +       +  +YGY APE+   +  T +SDVYS+GVV+LE+L+
Sbjct:  920 GLAKLMMNSPNYHNAMSRVAGSYGYIAPEYGYTMNITEKSDVYSYGVVLLEILS 973          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: GSO2_ARATH (LRR receptor-like serine/threonine-protein kinase GSO2 OS=Arabidopsis thaliana GN=GSO2 PE=2 SV=2)

HSP 1 Score: 124.02 bits (310), Expect = 2.973e-32
Identity = 66/167 (39.52%), Postives = 104/167 (62.28%), Query Frame = 3
Query:   72 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEH--GQRLLIYEYCSNGTLQDMLHSDDELKNN--LSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            + + T+  ++E +IG+G  G VY+A+L +G+ +AVKK+  +      +  F   V  +  IRH ++V+L GYC+    G  LLIYEY +NG++ D LH+++  K    L W TR+++ALG A+ +EYLH  C PPIVHR+ KS+N+LLD ++   +    FG   I+
Sbjct:  941 IMEATHYLNEEFMIGSGGSGKVYKAELKNGETIAVKKILWK-DDLMSNKSFNREVKTLGTIRHRHLVKLMGYCSSKADGLNLLIYEYMANGSVWDWLHANENTKKKEVLGWETRLKIALGLAQGVEYLHYDCVPPIVHRDIKSSNVLLDSNIEAHLGD--FGLAKIL 1104          

HSP 2 Score: 35.8094 bits (81), Expect = 2.973e-32
Identity = 20/55 (36.36%), Postives = 34/55 (61.82%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTA--YGYGAPEFESGIY-TCQSDVYSFGVVMLELLT 693
            GLA +++    +    + + A  YGY APE+   +  T +SDVYS G+V++E++T
Sbjct: 1099 GLAKILTGNYDTNTESNTMFAGSYGYIAPEYAYSLKATEKSDVYSMGIVLMEIVT 1153          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1534_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53420 OS=Arabidopsis thaliana GN=At1g53420 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 2.983e-32
Identity = 65/159 (40.88%), Postives = 93/159 (58.49%), Query Frame = 3
Query:   54 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            SF++  ++  TN+F   N IG G  G VY+ +L DG ++AVK+L     S+Q + EFL  +  I  + H N+V+L G C E GQ LL+YE+  N +L   L    E +  L W TR ++ +G AR L YLHE  +  IVHR+ K+ N+LLD  L   +S
Sbjct:  611 SFSLRQIKIATNNFDSANRIGEGGFGPVYKGKLFDGTIIAVKQLS--TGSKQGNREFLNEIGMISALHHPNLVKLYGCCVEGGQLLLVYEFVENNSLARALFGPQETQLRLDWPTRRKICIGVARGLAYLHEESRLKIVHRDIKATNVLLDKQLNPKIS 767          

HSP 2 Score: 36.965 bits (84), Expect = 2.983e-32
Identity = 22/52 (42.31%), Postives = 32/52 (61.54%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELL 690
            GLA L    S + +S  +   +GY APE+   G  T ++DVYSFG+V LE++
Sbjct:  770 GLAKLDEEDS-THISTRIAGTFGYMAPEYAMRGHLTDKADVYSFGIVALEIV 820          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5900_ARATH (Putative receptor-like protein kinase At5g39000 OS=Arabidopsis thaliana GN=At5g39000 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 2.986e-32
Identity = 70/175 (40.00%), Postives = 105/175 (60.00%), Query Frame = 3
Query:   18 STKTAK--PFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGK-LLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNN-LSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            +TK AK  P    R F+I  ++  TN F  + +IG G  GSVY+ Q+  G  L+AVK+L+   +S Q   EF   +  + ++RH ++V L GYC E  + +L+YEY  +GTL+D L   D+  +  LSW  R+ + +GAAR L+YLH   +  I+HR+ K+ NILLD++    VS
Sbjct:  491 NTKPAKSLPADLCRRFSIFEIKSATNDFEDKLIIGVGGFGSVYKGQIDGGATLVAVKRLE--ITSNQGAKEFETELEMLSKLRHVHLVSLIGYCDEDNEMVLVYEYMPHGTLKDHLFRRDKTSDPPLSWKRRLEICIGAARGLQYLHTGAKYTIIHRDIKTTNILLDENFVTKVS 663          

HSP 2 Score: 35.4242 bits (80), Expect = 2.986e-32
Identity = 20/46 (43.48%), Postives = 30/46 (65.22%), Query Frame = 1
Query:  556 SSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELL 690
            +S S + +S  +   +GY  PE+    + T +SDVYSFGVV+LE+L
Sbjct:  673 TSASQTHVSTVVKGTFGYLDPEYYRRQVLTEKSDVYSFGVVLLEVL 718          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 116.316 bits (290), Expect = 3.932e-32
Identity = 60/170 (35.29%), Postives = 103/170 (60.59%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKL----------LAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            ++F+++ L+  T +F  ++++G G  G V++  + +  L          +AVK+L++      +  E+L  +N + ++ H N+V+L GYC E   RLL+YE+ + G+L++ L         LSWNTR+RMALGAAR L +LH   QP +++R+FK++NILLD +    +S
Sbjct:   54 KNFSLSELKSATRNFRPDSVVGEGGFGCVFKGWIDESSLAPSKPGTGIVIAVKRLNQEGFQGHR--EWLAEINYLGQLDHPNLVKLIGYCLEEEHRLLVYEFMTRGSLENHLFRRGTFYQPLSWNTRVRMALGAARGLAFLHN-AQPQVIYRDFKASNILLDSNYNAKLS 220          

HSP 2 Score: 43.1282 bits (100), Expect = 3.932e-32
Identity = 25/53 (47.17%), Postives = 34/53 (64.15%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GLA     G  S +S  ++   GY APE+  +G  + +SDVYSFGVV+LELL+
Sbjct:  223 GLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLS 275          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: ACCR4_ARATH (Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana GN=CCR4 PE=1 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 5.074e-32
Identity = 65/168 (38.69%), Postives = 96/168 (57.14%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLD----------KRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            F+I  L   T+ FS    +G G  GSVY+  L DG+ +A+K+ +           R     KD  F+  + ++ R+ H N+V L G+  +  +R+L+YEY  NG+L D LH+     + LSW TR+ +AL AAR ++YLHE   PP++HR+ KS+NILLD      VS
Sbjct:  431 FSIDELALATDGFSVRFHLGIGSFGSVYQGVLSDGRHVAIKRAELTNPTLSGTTMRHRRADKDSAFVNELESMSRLNHKNLVRLLGFYEDTEERILVYEYMKNGSLADHLHNPQF--DPLSWQTRLMIALDAARGIQYLHEFIVPPVIHRDIKSSNILLDATWTAKVS 596          

HSP 2 Score: 38.5058 bits (88), Expect = 5.074e-32
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 1
Query:  568 VSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            VS LS H     GY  PE+ +    T +SDVYSFGVV+LELL+
Sbjct:  611 VSHLSLHAAGTLGYIDPEYYKFQQLTTKSDVYSFGVVLLELLS 653          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.572e-32
Identity = 63/157 (40.13%), Postives = 89/157 (56.69%), Query Frame = 3
Query:   69 SLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKL---------DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDD 512
            S+ Q      + N+IG G  G VYRA + +G+++AVKKL         D++  + +  D F   V  +  IRH NIV   G C     RLL+Y+Y  NG+L  +LH  +   ++L W+ R R+ LGAA+ L YLH  C PPIVHR+ K+ NIL+  D
Sbjct:  778 SVDQIIRCLVEPNVIGKGCSGVVYRADVDNGEVIAVKKLWPAMVNGGHDEKTKNVR--DSFSAEVKTLGTIRHKNIVRFLGCCWNRNTRLLMYDYMPNGSLGSLLH--ERRGSSLDWDLRYRILLGAAQGLAYLHHDCLPPIVHRDIKANNILIGLD 930          

HSP 2 Score: 48.1358 bits (113), Expect = 6.572e-32
Identity = 25/53 (47.17%), Postives = 36/53 (67.92%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFESGI-YTCQSDVYSFGVVMLELLT 693
            GLA L+  G + + S  +  +YGY APE+   +  T +SDVYS+GVV+LE+LT
Sbjct:  939 GLAKLVDEGDIGRCSNTVAGSYGYIAPEYGYSMKITEKSDVYSYGVVVLEVLT 991          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5343_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g53430 OS=Arabidopsis thaliana GN=At1g53430 PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 6.580e-32
Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = 3
Query:   54 SFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTN 554
            SFT+  +++ TN+F  EN IG G  G VY+  L DG  +AVK+L  +  S+Q + EF+  +  I  ++H N+V+L G C E  + LL+YEY  N +L   L   ++ + +L W+TR ++ +G A+ L YLHE  +  IVHR+ K+ N+LLD  L   +S       N
Sbjct:  656 SFTLKQIKRATNNFDPENKIGEGGFGPVYKGVLADGMTIAVKQLSSK--SKQGNREFVTEIGMISALQHPNLVKLYGCCIEGKELLLVYEYLENNSLARALFGTEKQRLHLDWSTRNKICIGIAKGLAYLHEESRLKIVHRDIKATNVLLDLSLNAKISDFGLAKLN 820          

HSP 2 Score: 35.8094 bits (81), Expect = 6.580e-32
Identity = 22/53 (41.51%), Postives = 32/53 (60.38%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L +    + +S  +    GY APE+   G  T ++DVYSFGVV LE+++
Sbjct:  815 GLAKL-NDDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVCLEIVS 866          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
Y1765_ARATH1.036e-3239.29Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH1.755e-3240.12Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]
Y1341_ARATH2.287e-3242.00Probable LRR receptor-like serine/threonine-protei... [more]
GSO2_ARATH2.973e-3239.52LRR receptor-like serine/threonine-protein kinase ... [more]
Y1534_ARATH2.983e-3240.88Probable LRR receptor-like serine/threonine-protei... [more]
Y5900_ARATH2.986e-3240.00Putative receptor-like protein kinase At5g39000 OS... [more]
NAK_ARATH3.932e-3235.29Probable serine/threonine-protein kinase NAK OS=Ar... [more]
ACCR4_ARATH5.074e-3238.69Serine/threonine-protein kinase-like protein CCR4 ... [more]
RCH2_ARATH6.572e-3240.13Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y5343_ARATH6.580e-3238.32Probable LRR receptor-like serine/threonine-protei... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
back to top