CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: PSKR1_DAUCA (Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.357e-31
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 3
Query:   84 TNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            T+SF+Q N+IG G  G VY+A LPDG  +A+K+L     + Q D EF   V  + R +H N+V L GYC     +LLIY Y  NG+L   LH   +   +L W TR+R+A GAA  L YLH+ C+P I+HR+ KS+NILL D     ++   FG   +I
Sbjct:  740 TSSFNQANIIGCGGFGLVYKATLPDGTKVAIKRLS--GDTGQMDREFQAEVETLSRAQHPNLVHLLGYCNYKNDKLLIYSYMDNGSLDYWLHEKVDGPPSLDWKTRLRIARGAAEGLAYLHQSCEPHILHRDIKSSNILLSDTFVAHLAD--FGLARLI 894          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK40_ARATH (Cysteine-rich receptor-like protein kinase 40 OS=Arabidopsis thaliana GN=CRK40 PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 1.208e-30
Identity = 63/167 (37.72%), Postives = 101/167 (60.48%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNI 557
            F +  +   T+ FS EN +G G  G+VY+   P+G+ +AVK+L K   S Q D EF   V+ + R++H N+V+L G+C E  + +L+YE+  N +L   +  +D+ ++ L+W  R R+  G AR L YLHE  Q  I+HR+ K++NILLD ++   V+   FG+  +
Sbjct:  336 FDLGMIVMATDDFSSENTLGQGGFGTVYKGTFPNGQEVAVKRLTK--GSGQGDMEFKNEVSLLTRLQHKNLVKLLGFCNEGDEEILVYEFVPNSSLDHFIFDEDK-RSLLTWEVRFRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVAD--FGTARL 497          

HSP 2 Score: 36.5798 bits (83), Expect = 1.208e-30
Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            G A L  S      +  +    GY APE+   G  + +SDVYSFGV++LE+++
Sbjct:  493 GTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 545          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.209e-30
Identity = 73/172 (42.44%), Postives = 97/172 (56.40%), Query Frame = 3
Query:   33 KPFTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCA-----EHGQRLLIYEYCSNGTLQDMLHSDDE-LKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            +P T +  F I  L++ TN+FSQ+N IG G  G VY+  LPDG ++AVKK+ +  S  Q D EF   V  I  ++H N+V L+G C+        QR L+Y+Y SNG L D L    E  K  LSW  R  + L  A+ L YLH   +P I HR+ K  NILLD D+   V+
Sbjct:  275 RPNTGSIWFKIEELEKATNNFSQKNFIGRGGFGFVYKGVLPDGSVIAVKKVIE--SEFQGDAEFRNEVEIISNLKHRNLVPLRG-CSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVA 443          

HSP 2 Score: 37.3502 bits (85), Expect = 1.209e-30
Identity = 24/52 (46.15%), Postives = 32/52 (61.54%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELL 690
            GLA     G  S L+  +   +GY APE+   G  T +SDVYSFGVV+LE++
Sbjct:  446 GLAKQSREGE-SHLTTRVAGTHGYLAPEYALYGQLTEKSDVYSFGVVILEIM 496          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.209e-30
Identity = 64/159 (40.25%), Postives = 95/159 (59.75%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSV 527
            + F+   +Q  T++FS +N++G G  G VY+  LP+G ++AVK+L     + +   +F   V  I    H N++ L G+C    +R+L+Y Y  NG++ D L  +   K +L WN RI +ALGAAR L YLHE C P I+HR+ K+ANILLD+     V
Sbjct:  286 KRFSFREIQTATSNFSPKNILGQGGFGMVYKGYLPNGTVVAVKRLKDPIYTGEV--QFQTEVEMIGLAVHRNLLRLFGFCMTPEERMLVYPYMPNGSVADRLRDNYGEKPSLDWNRRISIALGAARGLVYLHEQCNPKIIHRDVKAANILLDESFEAIV 442          

HSP 2 Score: 31.5722 bits (70), Expect = 1.209e-30
Identity = 23/57 (40.35%), Postives = 34/57 (59.65%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAY----GYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L+      Q   H+ TA     G+ APE+ S G  + ++DV+ FGV++LEL+T
Sbjct:  446 GLAKLLD-----QRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELIT 497          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: WAK4_ARATH (Wall-associated receptor kinase 4 OS=Arabidopsis thaliana GN=WAK4 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.045e-30
Identity = 63/168 (37.50%), Postives = 101/168 (60.12%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            FT   +++ T+ + +  ++G G  G+VY+  LPD  ++A+KK   R     + ++F+  V  + +I H N+V+L G C E    LL+YE+ S+GTL D LH      ++L+W  R+RMA+  A  L YLH     PI+HR+ K+ANILLD++L   V+   FG++ +I
Sbjct:  398 FTEEGMKEATDGYDENRILGQGGQGTVYKGILPDNSIVAIKKA--RLGDNSQVEQFINEVLVLSQINHRNVVKLLGCCLETEVPLLVYEFISSGTLFDHLHGS-MFDSSLTWEHRLRMAVEIAGTLAYLHSSASIPIIHRDIKTANILLDENLTAKVAD--FGASRLI 560          

HSP 2 Score: 35.039 bits (79), Expect = 2.045e-30
Identity = 21/52 (40.38%), Postives = 31/52 (59.62%), Query Frame = 1
Query:  541 LAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            L P+      + + G L    GY  PE+  +G+   +SDVYSFGVV++ELL+
Sbjct:  559 LIPMDKEDLATMVQGTL----GYLDPEYYNTGLLNEKSDVYSFGVVLMELLS 606          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 2.048e-30
Identity = 62/158 (39.24%), Postives = 95/158 (60.13%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            F +  +   TN FS EN +G G  GSVY+  LP G+ +AVK+L     S Q + EF   V  + R++H N+V+L G+C E  + +L+YE+  N +L   +  +D+ +  L+W+ R R+  G AR L YLHE  Q  I+HR+ K++NILLD ++   V+
Sbjct:  328 FDLGMILIATNEFSLENKLGQGGFGSVYKGILPSGQEIAVKRL--AGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDK-RWLLTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVA 482          

HSP 2 Score: 41.9726 bits (97), Expect = 2.048e-30
Identity = 20/53 (37.74%), Postives = 34/53 (64.15%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            G+A L +       +  ++  YGY APE+   G ++ +SDVYSFGV++LE+++
Sbjct:  485 GMARLFNMDETRGETSRVVGTYGYMAPEYVRHGQFSAKSDVYSFGVMLLEMIS 537          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 2.655e-30
Identity = 67/153 (43.79%), Postives = 97/153 (63.40%), Query Frame = 3
Query:   72 LQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            L++ T++FS++  +G G  GSVY  ++ DGK +AVK     +S   +  +F+  V  + RI H N+V L GYC E  +R+L+YEY  NG+L D LH   + K  L W TR+++A  AA+ LEYLH  C P I+HR+ KS+NILLD ++   VS
Sbjct:  601 LEEATDNFSKK--VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNR--QFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYKP-LDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVS 748          

HSP 2 Score: 31.5722 bits (70), Expect = 2.655e-30
Identity = 18/31 (58.06%), Postives = 22/31 (70.97%), Query Frame = 1
Query:  604 GYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GY  PE+  S   T +SDVYSFGVV+ ELL+
Sbjct:  772 GYLDPEYYASQQLTEKSDVYSFGVVLFELLS 802          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK39_ARATH (Putative cysteine-rich receptor-like protein kinase 39 OS=Arabidopsis thaliana GN=CRK39 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 2.667e-30
Identity = 65/167 (38.92%), Postives = 102/167 (61.08%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNI 557
            F +  +   T+ FS EN +G G  G+VY+  L +G+ +AVK+L K   S Q D EF   V+ + R++H N+V+L G+C E  +++L+YE+  N +L   +  DDE ++ L+W  R R+  G AR L YLHE  Q  I+HR+ K++NILLD ++   V+   FG+  +
Sbjct:  341 FDLGMVLAATDEFSSENTLGQGGFGTVYKGTLLNGQEVAVKRLTK--GSGQGDIEFKNEVSLLTRLQHRNLVKLLGFCNEGDEQILVYEFVPNSSLDHFIF-DDEKRSLLTWEMRYRIIEGIARGLLYLHEDSQLKIIHRDLKASNILLDAEMNPKVAD--FGTARL 502          

HSP 2 Score: 36.5798 bits (83), Expect = 2.667e-30
Identity = 20/53 (37.74%), Postives = 30/53 (56.60%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            G A L  S      +  +    GY APE+   G  + +SDVYSFGV++LE+++
Sbjct:  498 GTARLFDSDETRAETKRIAGTRGYMAPEYLNHGQISAKSDVYSFGVMLLEMIS 550          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.669e-30
Identity = 67/180 (37.22%), Postives = 107/180 (59.44%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNIIRFS*SVVRTS 590
            + F++  LQ  T+SFS +N++G G  G VY+ +L DG L+AVK+L K   +   + +F   V  I    H N++ L+G+C    +RLL+Y Y +NG++   L      +  L+W+ R ++ALG+AR L YLH+ C P I+HR+ K+ANILLD++    V    FG   ++ +  + V T+
Sbjct:  291 KRFSLRELQVATDSFSNKNILGRGGFGKVYKGRLADGTLVAVKRL-KEERTPGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPPSQLPLAWSIRQQIALGSARGLSYLHDHCDPKIIHRDVKAANILLDEEFEAVVGD--FGLARLMDYKDTHVTTA 467          

HSP 2 Score: 28.1054 bits (61), Expect = 2.669e-30
Identity = 16/41 (39.02%), Postives = 28/41 (68.29%), Query Frame = 1
Query:  586 HLLTAY----GYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            H+ TA     G+ APE+ S G  + ++DV+ +G+++LEL+T
Sbjct:  463 HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELIT 503          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.448e-30
Identity = 69/179 (38.55%), Postives = 96/179 (53.63%), Query Frame = 3
Query:   39 FTTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKL----DKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNIIR 563
            F+    F    + + TN F   +LIG G    VYRA L D  ++AVK+L    D+  S      EFL  V  +  IRH N+V+L G+C+      LIYEY   G+L  +L +D+E K  L+W  RI +  G A AL Y+H     PIVHR+  S NILLD+D    +S   FG+  +++
Sbjct:  833 FSVDGKFKYQDIIESTNEFDPTHLIGTGGYSKVYRANLQD-TIIAVKRLHDTIDEEISKPVVKQEFLNEVKALTEIRHRNVVKLFGFCSHRRHTFLIYEYMEKGSLNKLLANDEEAKR-LTWTKRINVVKGVAHALSYMHHDRITPIVHRDISSGNILLDNDYTAKISD--FGTAKLLK 1007          

HSP 2 Score: 34.2686 bits (77), Expect = 3.448e-30
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  601 YGYGAPEFESGI-YTCQSDVYSFGVVMLELL 690
            YGY APEF   +  T + DVYSFGV++LEL+
Sbjct: 1020 YGYVAPEFAYTMKVTEKCDVYSFGVLILELI 1050          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
PSKR1_DAUCA9.357e-3144.03Phytosulfokine receptor 1 OS=Daucus carota GN=PSKR... [more]
CRK40_ARATH1.208e-3037.72Cysteine-rich receptor-like protein kinase 40 OS=A... [more]
Y1105_ARATH1.209e-3042.44Probable receptor-like protein kinase At1g11050 OS... [more]
Y5457_ARATH1.209e-3040.25Probable LRR receptor-like serine/threonine-protei... [more]
WAK4_ARATH2.045e-3037.50Wall-associated receptor kinase 4 OS=Arabidopsis t... [more]
CRK36_ARATH2.048e-3039.24Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1677_ARATH2.655e-3043.79Probable LRR receptor-like serine/threonine-protei... [more]
CRK39_ARATH2.667e-3038.92Putative cysteine-rich receptor-like protein kinas... [more]
SERK2_ARATH2.669e-3037.22Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
Y1571_ARATH3.448e-3038.55Probable leucine-rich repeat receptor-like protein... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
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