CF417449

Overview
NameCF417449
Unique NameCF417449
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1561_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g56130 OS=Arabidopsis thaliana GN=At1g56130 PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.681e-29
Identity = 65/158 (41.14%), Postives = 89/158 (56.33%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            FT + L+  T  F   N +G G  G VY+  L DG+++AVK L     S+Q   +F+  +  I  + H N+V+L G C E   R+L+YEY  NG+L   L  D  L  +L W+TR  + LG AR L YLHE     IVHR+ K++NILLD  L   +S
Sbjct:  682 FTYSELKSATQDFDPSNKLGEGGFGPVYKGNLNDGRVVAVKLLS--VGSRQGKGQFVAEIVAISSVLHRNLVKLYGCCFEGEHRMLVYEYLPNGSLDQALFGDKTL--HLDWSTRYEICLGVARGLVYLHEEASVRIVHRDVKASNILLDSRLVPQIS 835          

HSP 2 Score: 33.4982 bits (75), Expect = 1.681e-29
Identity = 22/53 (41.51%), Postives = 31/53 (58.49%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            GLA L      + +S  +    GY APE+   G  T ++DVY+FGVV LEL++
Sbjct:  838 GLAKLYDDKK-THISTRVAGTIGYLAPEYAMRGHLTEKTDVYAFGVVALELVS 889          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: NORK_PEA (Nodulation receptor kinase OS=Pisum sativum GN=NORK PE=1 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.684e-29
Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = 3
Query:   45 TARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWF 542
            + + FT+  ++  T  +  + LIG G  GSVYR  L DG+ +AVK   + A+S Q   EF   +N +  I+H N+V L GYC E+ Q++L+Y + SNG+L D L+ +   +  L W TR+ +ALGAAR L YLH      ++HR+ KS+NILLD  +   V+   F
Sbjct:  581 SVKPFTLEYIELATEKY--KTLIGEGGFGSVYRGTLDDGQEVAVKV--RSATSTQGTREFDNELNLLSAIQHENLVPLLGYCNEYDQQILVYPFMSNGSLLDRLYGEPAKRKILDWPTRLSIALGAARGLAYLHTFPGRSVIHRDVKSSNILLDHSMCAKVADFGF 742          

HSP 2 Score: 27.7202 bits (60), Expect = 1.684e-29
Identity = 14/31 (45.16%), Postives = 24/31 (77.42%), Query Frame = 1
Query:  604 GYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GY  PE+ ++   + +SDV+SFGVV+LE+++
Sbjct:  763 GYLDPEYYKTQQLSEKSDVFSFGVVLLEIVS 793          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y4245_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g20450 OS=Arabidopsis thaliana GN=At4g20450 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 1.685e-29
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDD 512
            RS+T   +   TN+F  E  +G G  G VY   + D + +AVK L +  SS Q   +F   V+ + R+ H N+V L GYC E    +LIYEY SNG L+  L S +  ++ LSW  R+R+A   A+ LEYLH  C+PP++HR+ KS NILLD++
Sbjct:  579 RSYTYEEVAVITNNF--ERPLGEGGFGVVYHGNVNDNEQVAVKVLSE--SSAQGYKQFKAEVDLLLRVHHINLVTLVGYCDEGQHLVLIYEYMSNGNLKQHL-SGENSRSPLSWENRLRIAAETAQGLEYLHIGCKPPMIHRDIKSMNILLDNN 727          

HSP 2 Score: 36.5798 bits (83), Expect = 1.685e-29
Identity = 21/53 (39.62%), Postives = 34/53 (64.15%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GL+     GS + +S ++  + GY  PE+  +   T +SDV+SFGVV+LE++T
Sbjct:  736 GLSRSFPVGSETHVSTNVAGSPGYLDPEYYRTNWLTEKSDVFSFGVVLLEIIT 788          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1357_ARATH (Probable receptor-like protein kinase At1g30570 OS=Arabidopsis thaliana GN=At1g30570 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.686e-29
Identity = 64/163 (39.26%), Postives = 94/163 (57.67%), Query Frame = 3
Query:   42 TTARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVS 530
            T  R FT+A ++  T +F     IG G  G VYR +L DG L+A+K+      SQQ   EF   +  + R+RH ++V L G+C EH + +L+YEY +NGTL+  L   +     LSW  R+   +G+AR L YLH   +  I+HR+ K+ NILLD++    +S
Sbjct:  503 TMGRKFTLAEIRAATKNFDDGLAIGVGGFGKVYRGELEDGTLIAIKRATPH--SQQGLAEFETEIVMLSRLRHRHLVSLIGFCDEHNEMILVYEYMANGTLRSHLFGSN--LPPLSWKQRLEACIGSARGLHYLHTGSERGIIHRDVKTTNILLDENFVAKMS 661          

HSP 2 Score: 29.6462 bits (65), Expect = 1.686e-29
Identity = 21/49 (42.86%), Postives = 26/49 (53.06%), Query Frame = 1
Query:  553 ISSGSVSQLSGHLLTA----YGYGAPE-FESGIYTCQSDVYSFGVVMLE 684
            +S    S    H+ TA    +GY  PE F     T +SDVYSFGVV+ E
Sbjct:  665 LSKAGPSMDHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFE 713          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: HERK_ARATH (Receptor-like protein kinase HERK 1 OS=Arabidopsis thaliana GN=HERK1 PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 1.686e-29
Identity = 66/177 (37.29%), Postives = 101/177 (57.06%), Query Frame = 3
Query:   27 TAKPFTTARSFTI--ASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGST 551
            T    TT  ++ I  A+++  TN+F +   IG G  G VY+ +L DG  +AVK+ + +  SQQ   EF   +  + + RH ++V L GYC E+ + +LIYEY  NGT++  L+       +L+W  R+ + +GAAR L YLH     P++HR+ KSANILLD++    V+      T
Sbjct:  461 TLTSITTNANYRIPFAAVKDATNNFDESRNIGVGGFGKVYKGELNDGTKVAVKRGNPK--SQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILIYEYMENGTVKSHLYGSG--LPSLTWKQRLEICIGAARGLHYLHTGDSKPVIHRDVKSANILLDENFMAKVADFGLSKT 633          

HSP 2 Score: 31.5722 bits (70), Expect = 1.686e-29
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 1
Query:  598 AYGYGAPE-FESGIYTCQSDVYSFGVVMLELL 690
            ++GY  PE F     T +SDVYSFGVV+ E+L
Sbjct:  649 SFGYLDPEYFRRQQLTDKSDVYSFGVVLFEVL 680          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: CRK10_ARATH (Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana GN=CRK10 PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 1.692e-29
Identity = 66/174 (37.93%), Postives = 98/174 (56.32%), Query Frame = 3
Query:   42 TTARSFTI--ASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNI 557
            TTA S  +   ++Q  T+ F + N IG G  G VY+  L DG  +AVK+L K  SS Q + EF   V  + +++H N+V L G+C +  +R+L+YEY  N +L   L  D   K  L W  R ++  G AR + YLH+  +  I+HR+ K++NILLD D+   ++   FG   I
Sbjct:  318 TTADSLQLDYRTIQTATDDFVESNKIGQGGFGEVYKGTLSDGTEVAVKRLSK--SSGQGEVEFKNEVVLVAKLQHRNLVRLLGFCLDGEERVLVYEYVPNKSLDYFLF-DPAKKGQLDWTRRYKIIGGVARGILYLHQDSRLTIIHRDLKASNILLDADMNPKIAD--FGMARI 486          

HSP 2 Score: 41.9726 bits (97), Expect = 1.692e-29
Identity = 19/53 (35.85%), Postives = 34/53 (64.15%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPEFES-GIYTCQSDVYSFGVVMLELLT 693
            G+A +       + +  ++  YGY +PE+   G Y+ +SDVYSFGV++LE+++
Sbjct:  482 GMARIFGLDQTEENTSRIVGTYGYMSPEYAMHGQYSMKSDVYSFGVLVLEIIS 534          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: PEPR1_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR1 OS=Arabidopsis thaliana GN=PEPR1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.187e-29
Identity = 58/144 (40.28%), Postives = 86/144 (59.72%), Query Frame = 3
Query:   84 TNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDL 515
            T++ +++  IG G  G VYRA L  GK+ AVK+L   AS  + +   +  ++ I ++RH N+++L+G+       L++Y Y   G+L D+LH     +N L W+ R  +ALG A  L YLH  C PPIVHR+ K  NIL+D DL
Sbjct:  824 TDNLNEKYTIGRGAHGIVYRASLGSGKVYAVKRL-VFASHIRANQSMMREIDTIGKVRHRNLIKLEGFWLRKDDGLMLYRYMPKGSLYDVLHGVSPKENVLDWSARYNVALGVAHGLAYLHYDCHPPIVHRDIKPENILMDSDL 966          

HSP 2 Score: 34.6538 bits (78), Expect = 2.187e-29
Identity = 24/54 (44.44%), Postives = 35/54 (64.81%), Query Frame = 1
Query:  538 GLAPLISSGSVSQLSGHLLTAYGYGAPE--FESGIYTCQSDVYSFGVVMLELLT 693
            GLA L+   +VS  +  +    GY APE  F++ +   +SDVYS+GVV+LEL+T
Sbjct:  974 GLARLLDDSTVSTAT--VTGTTGYIAPENAFKT-VRGRESDVYSYGVVLLELVT 1024          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: WAKLM_ARATH (Wall-associated receptor kinase-like 17 OS=Arabidopsis thaliana GN=WAKL17 PE=2 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.197e-29
Identity = 62/171 (36.26%), Postives = 96/171 (56.14%), Query Frame = 3
Query:   48 ARSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            AR FT   L++ T +FS+  ++G G  G+VY+  L DG+ +AVKK   +   + K  EF+  V  + +I H ++V+L G C E    +L+YE+  NG L   +H ++     + W  R+R+A+  A AL YLH     PI HR+ KS NILLD+     V+   FG++  +
Sbjct:  429 ARIFTSKELEKATENFSENRVLGHGGQGTVYKGMLVDGRTVAVKK--SKVIDEDKLQEFINEVVILSQINHRHVVKLLGCCLETEVPILVYEFIINGNLFKHIHEEEADDYTMIWGMRLRIAVDIAGALSYLHSAASSPIYHRDIKSTNILLDEKYRAKVAD--FGTSRSV 595          

HSP 2 Score: 36.1946 bits (82), Expect = 2.197e-29
Identity = 18/31 (58.06%), Postives = 23/31 (74.19%), Query Frame = 1
Query:  604 GYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            GY  PE+  S  YT +SDVYSFGV++ EL+T
Sbjct:  611 GYVDPEYYRSSQYTEKSDVYSFGVILAELIT 641          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: WAK2_ARATH (Wall-associated receptor kinase 2 OS=Arabidopsis thaliana GN=WAK2 PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 2.199e-29
Identity = 61/168 (36.31%), Postives = 102/168 (60.71%), Query Frame = 3
Query:   57 FTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNII 560
            FT   +++ TN + +  ++G G  G+VY+  LPD  ++A+KK   R  ++ + ++F+  V  + +I H N+V++ G C E    LL+YE+ ++GTL D LH      ++L+W  R+R+A   A +L YLH     PI+HR+ K+ANILLD +L   V+   FG++ +I
Sbjct:  392 FTEKGMKEATNGYHESRILGQGGQGTVYKGILPDNSIVAIKKA--RLGNRSQVEQFINEVLVLSQINHRNVVKVLGCCLETEVPLLVYEFINSGTLFDHLHGS-LYDSSLTWEHRLRIATEVAGSLAYLHSSASIPIIHRDIKTANILLDKNLTAKVAD--FGASRLI 554          

HSP 2 Score: 35.039 bits (79), Expect = 2.199e-29
Identity = 19/41 (46.34%), Postives = 28/41 (68.29%), Query Frame = 1
Query:  574 QLSGHLLTAYGYGAPEF-ESGIYTCQSDVYSFGVVMLELLT 693
            QL+  +    GY  PE+  +G+   +SDVYSFGVV++ELL+
Sbjct:  560 QLTTIVQGTLGYLDPEYYNTGLLNEKSDVYSFGVVLMELLS 600          
BLAST of CF417449 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.305e-29
Identity = 73/179 (40.78%), Postives = 100/179 (55.87%), Query Frame = 3
Query:   51 RSFTIASLQQYTNSFSQENLIGAGMLGSVYRAQLPDGKLLAVKKLDKRASSQQKDDEFLELVNNIDRIRHANIVELKGYCAEHGQRLLIYEYCSNGTLQDMLHSDDELKNNLSWNTRIRMALGAARALEYLHEICQPPIVHRNFKSANILLDDDLAVSVSXLWFGSTNIIRFS*SVVRT 587
            R +T+  L+  TN   +EN+IG G  G VYR  L DG  +AVK L       +K  EF   V  I R+RH N+V L GYC E   R+L+Y++  NG L+  +H D    + L+W+ R+ + LG A+ L YLHE  +P +VHR+ KS+NILLD      VS   FG   ++    S V T
Sbjct:  140 RWYTLRELEAATNGLCEENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEK--EFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSD--FGLAKLLGSESSYVTT 314          
The following BLAST results are available for this feature:
BLAST of CF417449 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 329
Match NameE-valueIdentityDescription
Y1561_ARATH1.681e-2941.14Probable LRR receptor-like serine/threonine-protei... [more]
NORK_PEA1.684e-2940.36Nodulation receptor kinase OS=Pisum sativum GN=NOR... [more]
Y4245_ARATH1.685e-2942.86Probable LRR receptor-like serine/threonine-protei... [more]
Y1357_ARATH1.686e-2939.26Probable receptor-like protein kinase At1g30570 OS... [more]
HERK_ARATH1.686e-2937.29Receptor-like protein kinase HERK 1 OS=Arabidopsis... [more]
CRK10_ARATH1.692e-2937.93Cysteine-rich receptor-like protein kinase 10 OS=A... [more]
PEPR1_ARATH2.187e-2940.28Leucine-rich repeat receptor-like protein kinase P... [more]
WAKLM_ARATH2.197e-2936.26Wall-associated receptor kinase-like 17 OS=Arabido... [more]
WAK2_ARATH2.199e-2936.31Wall-associated receptor kinase 2 OS=Arabidopsis t... [more]
Y1154_ARATH2.305e-2940.78Probable serine/threonine-protein kinase At1g01540... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-379 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417449 ID=CF417449; Name=CF417449; organism=Citrus sinensis; type=EST; length=693bp
GAACTGCTGTGAAGGCTTCCACTAAAACTGCAAAACCTTTCACAACTGCA
AGGTCTTTCACCATTGCATCCCTTCAACAATATACTAACAGCTTTTCTCA
AGAAAACCTTATAGGTGCTGGCATGCTGGGGAGTGTTTATAGGGCACAGC
TTCCTGATGGAAAGCTACTAGCAGTCAAGAAACTGGACAAGAGGGCTTCA
AGTCAGCAGAAGGATGATGAATTTCTTGAACTGGTGAACAATATTGATCG
AATTCGACATGCTAATATAGTCGAGCTCAAGGGTTACTGCGCAGAGCATG
GCCAAAGGCTTCTTATATATGAGTATTGCAGTAACGGAACTCTGCAGGAT
ATGCTACACTCAGATGATGAATTAAAAAATAATCTTTCATGGAACACCCG
CATTCGGATGGCACTTGGAGCTGCTAGAGCCTTAGAGTACTTGCACGAGA
TTTGTCAACCACCTATTGTACACAGAAATTTTAAGTCGGCCAATATTCTT
CTTGACGATGATCTTGCTGTGAGTGTTTCTGNATTGTGGTTTGGCTCCAC
TAATATCATCAGGTTCAGTTAGTCAGTTGTCAGGACATCTGCTAACAGCT
TATGGTTATGGAGCTCCAGAATTTGAGTCAGGAATTTATACTTGTCAGAG
TGATGTTTACAGCTTTGGGGTAGTTATGCTAGAACTCTTAACA
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