CF417451

Overview
NameCF417451
Unique NameCF417451
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length699
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13853 contig Csv1_Contig13853:398..1095. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_ATRBE (Ferredoxin OS=Atropa belladonna PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 60/96 (62.50%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  217 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YK+KL+ P+G   EF+  +D YILD AEE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++YP SD  I++HKEEEL
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEEL 95          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER1_DUNSA (Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.792e-30
Identity = 61/94 (64.89%), Postives = 78/94 (82.98%), Query Frame = 1
Query:  223 YKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            Y + L  P+GE+ + E   D YILDAAEEAGVDLPYSCRAG+CS+CAGK+ SG+VDQSD SFLDD+QM++G++LTC++Y TSDC I +H+EE L
Sbjct:    2 YMVTLKTPSGEQ-KVEVSPDSYILDAAEEAGVDLPYSCRAGSCSSCAGKVESGTVDQSDQSFLDDDQMDSGFVLTCVAYATSDCTIVTHQEENL 94          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_PORYE (Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.647e-30
Identity = 63/98 (64.29%), Postives = 77/98 (78.57%), Query Frame = 1
Query:  214 MAVYKIKLI-GPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            MA YKI L+    G +  F   ED YILDAAEE G++LPYSCRAGACSTCAGK+  G+VDQ+D SFLDD+Q+ AGY+LTCI+YP+SDC I +H E+EL
Sbjct:    1 MADYKIHLLCEEEGIDVTFNCAEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQADQSFLDDDQLLAGYVLTCIAYPSSDCTISTHVEQEL 98          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER3_CYACA (Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.647e-30
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 1
Query:  217 AVYKIKLIGPN-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YKI L+  + G +   E  +DQYILDAAEE G+DLPYSCRAGACSTCAGKL+ G VDQSD SFLDD+Q++AG++LTC++YPTS+  I +H+EE L
Sbjct:    1 ASYKIHLVNKDQGIDETIECPDDQYILDAAEEQGLDLPYSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQVKAGFVLTCVAYPTSNATILTHQEESL 97          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_SOLNI (Ferredoxin OS=Solanum nigrum PE=1 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.763e-30
Identity = 59/96 (61.46%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  217 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YK+KL+ P+G   EF+  +D YILD AEE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++YP SD  I++HKEE+L
Sbjct:    1 ATYKVKLVTPDGPI-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKEEDL 95          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_MEDSA (Ferredoxin OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 60/96 (62.50%), Postives = 78/96 (81.25%), Query Frame = 1
Query:  217 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YK+KL+ P G + EFE  +D YILD AEE G+ LPYSCRAG+CS+CAGK+ +G V+QSDGSFLDD+Q+E G++LTC++Y  SD  I++HKEEEL
Sbjct:    1 ASYKVKLVTPEGTQ-EFECPDDVYILDHAEEEGIVLPYSCRAGSCSSCAGKVAAGEVNQSDGSFLDDDQIEEGWVLTCVAYAKSDVTIETHKEEEL 95          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER2_HYONI (Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.221e-30
Identity = 59/96 (61.46%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  217 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YK+KL+ P+G   EF+  +D YILD AEE G +LPYSCRAG+CS+CAGK+ +G+VDQSDG+FLDD+QM  G++LTC++YP SD  I++HKEE+L
Sbjct:    1 ATYKVKLVTPDGPV-EFDCPDDVYILDQAEEEGHELPYSCRAGSCSSCAGKVKAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKEEDL 95          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_THAWE (Ferredoxin OS=Thalassiosira weissflogii GN=petF PE=3 SV=3)

HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30
Identity = 61/101 (60.40%), Postives = 79/101 (78.22%), Query Frame = 1
Query:  214 MAVYKIKLIGPNGEEHEF----EAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            MA YK+ LI    EEH+     +  +D ++LDAAEEAG+DLPYSCRAGACSTCAGK+  G++DQS+ +FLDD+QM AG++LTCI+YP SDC I  H+E+EL
Sbjct:    1 MATYKVTLIS---EEHDINTTIDCNDDVFVLDAAEEAGIDLPYSCRAGACSTCAGKVTEGTIDQSEQTFLDDDQMGAGFVLTCIAYPKSDCTILVHQEDEL 98          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER_PORUM (Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30
Identity = 63/97 (64.95%), Postives = 74/97 (76.29%), Query Frame = 1
Query:  217 AVYKIKLIGPN-GEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YKI L+    G +  F+  ED YILDAAEE G++LPYSCRAGACSTCAGK+  G+VDQSD SFLDD QM  GY+LTCI+YP SDC I +H E+EL
Sbjct:    1 ADYKIHLVSKEEGIDVTFDCSEDTYILDAAEEEGIELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQEL 97          
BLAST of CF417451 vs. ExPASy Swiss-Prot
Match: FER1_PHYES (Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.124e-30
Identity = 56/96 (58.33%), Postives = 79/96 (82.29%), Query Frame = 1
Query:  217 AVYKIKLIGPNGEEHEFEAQEDQYILDAAEEAGVDLPYSCRAGACSTCAGKLVSGSVDQSDGSFLDDNQMEAGYLLTCISYPTSDCVIQSHKEEEL 504
            A YK+ L+ P+G +   +  +D Y+LDAAEEAG+DLPYSCRAG+CS+CAGK+ +G+VDQ D SFLDD+Q+EAG++LTC++YP  D  I++HKEE++
Sbjct:    1 ATYKVTLVTPSGTQ-TIDCPDDTYVLDAAEEAGLDLPYSCRAGSCSSCAGKVTAGTVDQEDQSFLDDDQIEAGFVLTCVAYPKGDVTIETHKEEDI 95          
The following BLAST results are available for this feature:
BLAST of CF417451 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 109
Match NameE-valueIdentityDescription
FER_ATRBE2.792e-3062.50Ferredoxin OS=Atropa belladonna PE=1 SV=1[more]
FER1_DUNSA2.792e-3064.89Ferredoxin-1 OS=Dunaliella salina PE=1 SV=1[more]
FER_PORYE3.647e-3064.29Ferredoxin OS=Porphyra yezoensis GN=petF PE=3 SV=1[more]
FER3_CYACA3.647e-3063.92Ferredoxin OS=Cyanidium caldarium GN=PETF PE=1 SV=... [more]
FER_SOLNI4.763e-3061.46Ferredoxin OS=Solanum nigrum PE=1 SV=1[more]
FER_MEDSA6.221e-3062.50Ferredoxin OS=Medicago sativa PE=1 SV=1[more]
FER2_HYONI6.221e-3061.46Ferredoxin-2 OS=Hyoscyamus niger PE=1 SV=1[more]
FER_THAWE8.124e-3060.40Ferredoxin OS=Thalassiosira weissflogii GN=petF PE... [more]
FER_PORUM8.124e-3064.95Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV... [more]
FER1_PHYES8.124e-3058.33Ferredoxin-1 OS=Phytolacca esculenta PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-381 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417451 ID=CF417451; Name=CF417451; organism=Citrus sinensis; type=EST; length=699bp
AACCCACTCGCCACCTCGCGCGCTCCGCCGCTCGATCTCTTGCTTTTCTG
GGTAAAGATGTCGACTGTGACACTTAGTGCCCCGTGCATGGTTAAAGCTG
CACCCAGAAATCAACTATCAAGGAACTTAATCAAGAGCCCATCCTCACTT
GGGTCTGTTAAGGGCATCTCCAAGACCTTTGGCCTGAAATGCTCTCCCAA
TTTCCAAGCATCAATGGCTGTCTACAAGATTAAGCTGATTGGACCTAACG
GTGAAGAGCATGAGTTTGAGGCCCAGGAAGACCAGTACATCCTCGATGCA
GCTGAGGAAGCAGGAGTCGACCTGCCCTATTCCTGCCGCGCTGGTGCTTG
CTCGACGTGTGCTGGGAAGTTGGTGTCTGGTTCAGTTGACCAGTCAGATG
GTTCCTTCCTCGATGACAATCAAATGGAGGCTGGTTATCTGCTGACTTGC
ATTTCATACCCGACTTCAGATTGCGTGATTCAGTCTCACAAGGAAGAAGA
GCTTTGCTGAGTACTGTCGGTTGATTTAGGGTTTTTCAAGTATGAACTGT
GATCAAGTGCCTGAGTATGCCGATAAGGTTTCTCATGGACCTACAATATT
TTTTAGATTTCAGTGTGTTGTCTTGTGCAATGGNAATCTTTAAATTTTCA
TTTGGTTATACTATTACTGGCATTTTGGGATTTCATTTCATGTGAAAGG
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