CF417452

Overview
NameCF417452
Unique NameCF417452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:501..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 9.763e-58
Identity = 99/204 (48.53%), Postives = 141/204 (69.12%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            RLY LAP+ K+ V +++GVS+ P   +  D+V +  W+ +KD ILEG + ++KA GM  +DY GTD RFN++FN  M   ++ ++ KI+E+Y GF+ +  +VDV            +KYP IKGINFD+PHVI+DA SYPG+EHVGGDM+  IP GDA+ MKW+ H++ DE+C K+L+NCY ALP +G+V+V    LP  PD +
Sbjct:   86 RLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYPGVEHVGGDMFVNIPNGDAVFMKWICHDWSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQS 289          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 7.736e-55
Identity = 94/204 (46.08%), Postives = 137/204 (67.16%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            R YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF+ ++ LVDV            S++PHI G+NFD+PHVI +A  +PG+ HVGGDM+  +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+V+   LP   ++T
Sbjct:  105 RRYSAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDFYTGFEGVSTLVDVGGGVGATLHAITSRHPHISGVNFDLPHVISEAPPFPGVRHVGGDMFASVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEAT 308          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.320e-54
Identity = 96/205 (46.83%), Postives = 139/205 (67.80%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPE-GDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            R Y+ APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD+RFN VFN GM   +  +  K+++ Y GF   + +VDV            S++PHI+GIN+D+PHVI +A  +PG+EHVGGDM+  +P  GDAILMKW+LH++ DE+C ++L+NCY ALP  GKV+V+   LPE  D+T
Sbjct:  108 RRYAAAPVCKWLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDARFNRVFNEGMKNHSVIITKKLLDLYTGFDAASTVVDVGGGVGATVAAVVSRHPHIRGINYDLPHVISEAPPFPGVEHVGGDMFASVPRGGDAILMKWILHDWSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDAT 312          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.320e-54
Identity = 96/202 (47.52%), Postives = 135/202 (66.83%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPD 616
            R+Y  AP+  Y  S+    S+ P + L  DKVMM  WF L D ILEG + + +A GM  +DY GTD RFN VFN GM   T  V+ K++++Y GF ++  LVDV            +K+ HIKGIN+D+PHVI DA SYPG+EHVGG+M++ IP+ DAI MKW+LH++ DE+C+KIL  CY++L   GK++++ S +P +P+
Sbjct:  105 RVYGPAPLCNYLASNDGQGSLGPLLVLHHDKVMMESWFHLNDYILEGGVPFKRAHGMIQFDYTGTDERFNHVFNQGMAHHTILVMKKLLDNYNGFNDVKVLVDVGGNIGVNVSMIVAKHTHIKGINYDLPHVIADAPSYPGVEHVGGNMFESIPQADAIFMKWVLHDWSDEHCVKILNKCYESLAKGGKIILVESLIPVIPE 306          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.723e-54
Identity = 94/198 (47.47%), Postives = 134/198 (67.68%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLP 604
            R YS APV K+   +++GVSM     ++ DKV+M  W+ LKD +L+G + +NKA GM  ++Y GTD RFN VFN GM   +  +  K++E Y GF+ ++ LVDV            S +P IKGINFD+PHVI +A  +PG++HVGGDM++ +P GDAILMKW+LH++ D +C  +L+NCY ALP +GKV+++   LP
Sbjct:  103 RRYSAAPVGKWLTPNEDGVSMAALTLMNQDKVLMESWYYLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNRVFNEGMKNHSVIITKKLLEFYTGFEGVSTLVDVGGGIGATLHAITSHHPQIKGINFDLPHVISEAPPFPGVQHVGGDMFKSVPAGDAILMKWILHDWSDAHCATLLKNCYDALPENGKVIIVECVLP 300          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 5.557e-45
Identity = 83/201 (41.29%), Postives = 131/201 (65.17%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILE-GELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEV 610
            R+Y L   ++  V+ ++ VS+ P +  + DK ++  ++ +KD +LE G + +++  GMDF+ Y G + R N+ FN  M   ++   +++ + YKGF N+  LVDV            +K+PHI+GINF++PHVI DA  YPG+EHV GDM++ +P    IL+KW+LH++DD+  IKIL+NC+KALP +G V+VI   LP+V
Sbjct:  118 RVYGLNEESRCLVASEDKVSVVPMLLFTSDKAVVESFYNIKDVVLEEGVIPFDRTHGMDFFQYAGKEERVNKSFNQAMGAGSTIAFDEVFKVYKGFDNLKELVDVGGGIGTSLSNIVAKHPHIRGINFELPHVIGDAPDYPGVEHVPGDMFEGVPNAQNILLKWVLHDWDDDRSIKILKNCWKALPENGTVIVIEFVLPQV 318          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 4.121e-40
Identity = 76/206 (36.89%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   11 RLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKAL-GMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDSTE 625
            R+Y L+ V KY V D++   +  +        ++  W   K+ +++ ++   K + G+  Y+++G D + N++FN  M+   +  + +++E Y GF+ I+ LVDV            SKYP IKGINFD+P VI++A    G+EHVGGDM+  +P+GDA+++K + HN+ DE CI+ L NC+KAL  +GKV+++   LPE P+++E
Sbjct:  112 RVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGVTKYEFMGKDKKMNQIFNKSMVDVCATEMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIENAPPLSGIEHVGGDMFASVPQGDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSE 317          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: 4OMT_COPJA (3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.267e-30
Identity = 71/206 (34.47%), Postives = 115/206 (55.83%), Query Frame = 2
Query:    5 GVRLYSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND-GKVLVINSTLPEVPD 616
            G + Y+L P+A   +S     SM P +     K  M  W  +KD + +   ++ KA+GM  ++YL      +++FN GM G+T  + + ++   +  FQ I  LVDV              +PHIK   FD+PHVI ++   P +E +GGDM++ +P   AI++K +LH+++DE+ IKIL+ C  A+P D GKV++++  L E  D
Sbjct:   90 GQKKYALEPIATL-LSRNAKRSMVPMILGMTQKDFMTPWHSMKDGLSDNGTAFEKAMGMTIWEYLEGHPDQSQLFNEGMAGETRLLTSSLISGSRDMFQGIDSLVDVGGGNGTTVKAISDAFPHIKCTLFDLPHVIANSYDLPNIERIGGDMFKSVPSAQAIILKLILHDWNDEDSIKILKQCRNAVPKDGGKVIIVDVALDEESD 294          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: 6OMT_COPJA ((RS)-norcoclaurine 6-O-methyltransferase OS=Coptis japonica PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.771e-28
Identity = 70/198 (35.35%), Postives = 111/198 (56.06%), Query Frame = 2
Query:   17 YSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQIL-EGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG-FQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALP-NDGKVLVINSTL 601
            Y LAP AKY V   +   +   + ++ DK  M  W  LKD +  E   ++ KALG + + Y+      N++FN  M   +  +++ +V+     F  IT LVDV            + +PHIK   +D+PHVI D+  Y  +  V GDM++ IP+ DAI+MK +LH++DD+ CI+IL+ C +A+P   GKV++++  L
Sbjct:   89 YGLAPPAKYLVKGWDKCMVGSILAIT-DKDFMAPWHYLKDGLSGESGTAFEKALGTNIWGYMAEHPEKNQLFNEAMANDSRLIMSALVKECGNIFNGITTLVDVGGGTGTAVRNIANAFPHIKCTVYDLPHVIADSPGYSEVHCVAGDMFKFIPKADAIMMKCILHDWDDKECIEILKRCKEAVPVKGGKVIIVDIVL 285          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: 7OMT6_MEDSA (Isoflavone-7-O-methyltransferase 6 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.055e-23
Identity = 60/207 (28.99%), Postives = 108/207 (52.17%), Query Frame = 2
Query:   17 YSLAPVAKYYVSDQNGVSMRPYMNLSLDKVMMPGWFQLKDQILEGELS-YNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPND---GKVLVINSTLPEVPDSTE 625
            Y+L   ++  V   + + + P +   LD  +   + +LK  I E +L+ +   LG  F+D+L  +  +N  FN+ M   +  +   + +    F  +  +VDV              +P +K I FD P V+++ S    + +VGGDM+  IP  DA+L+K++LHN+ D++C++IL+ C +A+ ND   GKV +I+  + E  D  +
Sbjct:   94 YALTVASELLVRGSD-LCLAPMVECVLDPTLSGSYHELKKWIYEEDLTLFGVTLGSGFWDFLDKNPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSIPNADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDEKKDENQ 299          
The following BLAST results are available for this feature:
BLAST of CF417452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
COMT1_EUCGL9.763e-5848.53Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_MAIZE7.736e-5546.08Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
OMT1_ORYSJ1.320e-5446.83Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
IMT1_MESCR1.320e-5447.52Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
COMT1_SACOF1.723e-5447.47Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
SMT_COPJA5.557e-4541.29(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA4.121e-4036.89Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
4OMT_COPJA2.267e-3034.473'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltran... [more]
6OMT_COPJA2.771e-2835.35(RS)-norcoclaurine 6-O-methyltransferase OS=Coptis... [more]
7OMT6_MEDSA2.055e-2328.99Isoflavone-7-O-methyltransferase 6 OS=Medicago sat... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-382 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417452 ID=CF417452; Name=CF417452; organism=Citrus sinensis; type=EST; length=629bp
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCT
CATGTTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGG
AGATATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGA
TGCTTCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGT
TACAAAGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTT
GCCAGAAGTGCCTGACAGTACCGAGGCTT
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