CF417452

Overview
NameCF417452
Unique NameCF417452
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length629
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9906 contig Csv1_Contig9906:501..1129. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: OMT9_DICDI (O-methyltransferase 9 OS=Dictyostelium discoideum GN=omt9 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.294e-13
Identity = 45/160 (28.12%), Postives = 83/160 (51.88%), Query Frame = 2
Query:  128 LKDQILEGELSYNKALGMD-FYDYLGTDSRFNEVFNNGMIGQTSFVINKIVESYKG--FQNITRLVDVXXXXXXXXXXXXSKYPHIK-GINFDVPHVIKDAS-----SYPGMEHVGGDMYQKIPEGDAILMKWMLHNFDDENCIKILRNCYKALPNDGKV 580
            L +    G  +  K++G++ F++      ++ ++FN  M   T   I+ I +S KG  F     +VD+              YP IK GINFD+  VI  +      S+P + H+ G+ ++ +PE D  +MK++LH++  ++C+KIL+   K++  + K+
Sbjct:  133 LPETFANGHSNATKSVGVNHFWELFDLHPQYKDLFNQTMKVYTEAAISNITQS-KGIDFSQYDTVVDIGGNHGLLIGNLLEIYPTIKHGINFDLDVVINSSDQTLRYSHPRLTHIPGNFFESVPESDCYIMKFILHDWPTQDCVKILKTISKSMKPNAKI 291          
BLAST of CF417452 vs. ExPASy Swiss-Prot
Match: DMPM_STRAD (O-demethylpuromycin-O-methyltransferase OS=Streptomyces alboniger GN=dmpM PE=4 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.131e-12
Identity = 47/182 (25.82%), Postives = 80/182 (43.96%), Query Frame = 2
Query:  104 VMMPGWFQLKDQILEGELSYNKALGMDFYDYLGTDSRFNEVFNNGMIGQTSFVINKIV-ESYKGFQNITRLVDVXXXXXXXXXXXXSKYPHIKGINFDVPHVIKDASSYPGMEHVG-------GDMYQKIPEG-DAILMKWMLHNFDDENCIKILRNCYKALPNDGKVLVINSTLPEVPDST 622
            V    W      I  GE ++++  G DF+ YL      +  F + M   T  +   +  E    F +   +VD+            S +P ++G+ FD P   +DA++      VG       GD + ++P G D  ++K +LH++ D     ILR    A+P   ++LV+   LP+  DS+
Sbjct:  138 VFRQAWSHFDHSIRTGEPAFDQVFGTDFFSYLSERPELSGTFTSSMREATRTMSTALAKEEEYDFSSYGTVVDIGGADGSLLAAVLSAHPGVEGVVFDSPEGARDAAATLDAAGVGERGRVETGDFFTRVPGGGDLYVLKSILHDWSDARSADILRTVRAAMPAHARLLVVEVLLPDTVDSS 319          
The following BLAST results are available for this feature:
BLAST of CF417452 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
OMT9_DICDI4.294e-1328.13O-methyltransferase 9 OS=Dictyostelium discoideum ... [more]
DMPM_STRAD2.131e-1225.82O-demethylpuromycin-O-methyltransferase OS=Strepto... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-382 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_D06 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417452 ID=CF417452; Name=CF417452; organism=Citrus sinensis; type=EST; length=629bp
TCATGGAGTAAGGCTCTACAGTCTCGCTCCTGTCGCTAAATACTATGTGA
GTGATCAAAACGGCGTCTCAATGCGTCCCTATATGAACTTGTCTCTTGAC
AAAGTAATGATGCCTGGCTGGTTCCAATTGAAAGACCAAATTCTTGAAGG
AGAACTTTCGTATAATAAAGCCCTCGGAATGGATTTCTACGATTATCTGG
GCACCGACTCCAGGTTCAATGAAGTTTTCAACAATGGAATGATCGGCCAG
ACTTCTTTTGTAATCAATAAGATTGTAGAATCCTACAAAGGCTTTCAGAA
TATTACGCGCCTTGTTGACGTTGGCGGTGGTTTAGGAATCACCCTTGCGA
CCATAATTTCCAAATACCCTCATATTAAGGGTATTAATTTTGACGTACCT
CATGTTATAAAAGATGCCTCATCTTATCCCGGCATGGAACATGTTGGCGG
AGATATGTACCAAAAAATTCCAGAGGGGGATGCCATTTTAATGAAGTGGA
TGCTTCATAATTTTGATGATGAGAATTGCATAAAGATACTGAGGAATTGT
TACAAAGCTCTTCCAAATGATGGAAAGGTACTTGTTATTAACTCAACGTT
GCCAGAAGTGCCTGACAGTACCGAGGCTT
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