CF417469

Overview
NameCF417469
Unique NameCF417469
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length626
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_STAAM (Catalase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=katA PE=1 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_STAAC (Catalase OS=Staphylococcus aureus (strain COL) GN=katA PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_STAAB (Catalase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=katA PE=3 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_STAA8 (Catalase OS=Staphylococcus aureus (strain NCTC 8325) GN=katA PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_STAA3 (Catalase OS=Staphylococcus aureus (strain USA300) GN=katA PE=3 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 4.666e-36
Identity = 76/162 (46.91%), Postives = 108/162 (66.67%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +  RD RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATT_YEAST (Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=1 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.040e-35
Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 3
Query:  168 GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE------YWRILDFCSHLPESLSTFSWFF 626
            GP+LL+D+HL+E +A F RER+PERVVHA+G   +  FE T  +S +T A  ++  G + P +VRFSTV  E G+P+T RDPRG + KFYT  GN D + N+ PVFF+RDAIKFP  IH+ K +P+SH+ +      YW   D+ +  PES+   ++ F
Sbjct:   37 GPILLQDFHLLENIASFDRERVPERVVHAKGGGCRLEFELTDSLSDITYAAPYQNVGYKCPGLVRFSTVGGESGTPDTARDPRGVSFKFYTEWGNHDWVFNNTPVFFLRDAIKFPVFIHSQKRDPQSHLNQFQDTTIYW---DYLTLNPESIHQITYMF 192          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATT_YEAS7 (Catalase T OS=Saccharomyces cerevisiae (strain YJM789) GN=CTT1 PE=3 SV=2)

HSP 1 Score: 149.828 bits (377), Expect = 1.040e-35
Identity = 76/159 (47.80%), Postives = 106/159 (66.67%), Query Frame = 3
Query:  168 GPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQE------YWRILDFCSHLPESLSTFSWFF 626
            GP+LL+D+HL+E +A F RER+PERVVHA+G   +  FE T  +S +T A  ++  G + P +VRFSTV  E G+P+T RDPRG + KFYT  GN D + N+ PVFF+RDAIKFP  IH+ K +P+SH+ +      YW   D+ +  PES+   ++ F
Sbjct:   37 GPILLQDFHLLENIASFDRERVPERVVHAKGGGCRLEFELTDSLSDITYAAPYQNVGYKCPGLVRFSTVGGESGTPDTARDPRGVSFKFYTEWGNHDWVFNNTPVFFLRDAIKFPVFIHSQKRDPQSHLNQFQDTTIYW---DYLTLNPESIHQITYMF 192          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATB_STAAA (Catalase-like protein OS=Staphylococcus aureus subsp. anaerobius GN=katB PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.316e-35
Identity = 75/162 (46.30%), Postives = 107/162 (66.05%), Query Frame = 3
Query:  120 GAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESL 605
            G PV +  +S+T G RGP+L++D + +E+++ F RE IPER +HA+G+ A G F  T DI+  T A +F   G QT +  RFSTV  ERG+ +   D RGFA+KFYT EGNWDL+GN+ PVFF RD   F  +  A K +P++++++     DF + LPE+L
Sbjct:   13 GHPVSDRENSMTAGPRGPLLMQDIYFLEQMSQFDREVIPERRMHAKGSGAFGTFTVTKDITKYTNAKIFSEIGKQTEMFARFSTVAGERGAADAESDIRGFALKFYTEEGNWDLVGNNTPVFFFRDPKLFVSLNRAVKRDPRTNMRDAQNNWDFWTGLPEAL 174          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_BOTFU (Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.316e-35
Identity = 82/178 (46.07%), Postives = 104/178 (58.43%), Query Frame = 3
Query:   99 PFMTTNAGAPVWNDNHSLTVGS--RGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFKPNPKSHIQEYWRILDFCSHLPESLSTFSWFF 626
            P +TT  GAPV     +  +G+  R  +LL+D +L+E + H   ERIPERVVHARG SA G+FE T DIS +T A      G QT +  RFSTV     S ET+RD RGFA K +T EGN D L  S PVF IRD  KFP   HA K NP+S + ++    D+ +H  E +    + F
Sbjct:   11 PAITTMNGAPVLKPASTQRIGNQLRATLLLQDINLLELIQHITHERIPERVVHARGTSAHGYFEVTDDISDVTSAAFLNRVGKQTDIFCRFSTVAGRAESAETVRDTRGFAFKMFTEEGNLDWLFLSTPVFPIRDGAKFPSFTHATKKNPRSGLPDHKAFWDYFTHNQEGIHFLMFLF 188          
BLAST of CF417469 vs. ExPASy Swiss-Prot
Match: CATA_NEIGO (Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 6.973e-32
Identity = 84/178 (47.19%), Postives = 109/178 (61.24%), Query Frame = 3
Query:   84 TTHNAPF--MTTNAGAPVWNDNHSLTVGSRGPVLLEDYHLVEKLAHFARERIPERVVHARGASAKGFFECTHDISHLTCADLFRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTREGNWDLLGNSIPVFFIRDAIKFPDVIHAFK--PNPKSHIQEYWRILDFCSHLPESL 605
            TT   P   +T N GAPV ++ +SLT G+RGP+L +D  L EKLA F RE IPER +HA+G+ A G F  T DI+  T A +F   G +T +  R +TV  ERG+    R  RGFA+KFYT EGNWD++GN+ PVF+  D  KFPD+  A K   +  S     W   DF + LPE+L
Sbjct:    2 TTSKCPVTHLTMNNGAPVADNQNSLTAGTRGPLLTQDLWLNEKLADFVREVIPERRMHAKGSGAFGTFTVTRDITKYTRAKIFSEVGKKTEMFGRLATVAGERGADAYTR-VRGFALKFYTEEGNWDVVGNNTPVFY-PDLRKFPDLNKAVKRSAHQYSSATNNW---DFWALLPEAL 174          
The following BLAST results are available for this feature:
BLAST of CF417469 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 141
Match NameE-valueIdentityDescription
CATA_STAAM4.666e-3646.91Catalase OS=Staphylococcus aureus (strain Mu50 / A... [more]
CATA_STAAC4.666e-3646.91Catalase OS=Staphylococcus aureus (strain COL) GN=... [more]
CATA_STAAB4.666e-3646.91Catalase OS=Staphylococcus aureus (strain bovine R... [more]
CATA_STAA84.666e-3646.91Catalase OS=Staphylococcus aureus (strain NCTC 832... [more]
CATA_STAA34.666e-3646.91Catalase OS=Staphylococcus aureus (strain USA300) ... [more]
CATT_YEAST1.040e-3547.80Catalase T OS=Saccharomyces cerevisiae GN=CTT1 PE=... [more]
CATT_YEAS71.040e-3547.80Catalase T OS=Saccharomyces cerevisiae (strain YJM... [more]
CATB_STAAA2.316e-3546.30Catalase-like protein OS=Staphylococcus aureus sub... [more]
CATA_BOTFU2.316e-3546.07Catalase A OS=Botryotinia fuckeliana GN=catA PE=2 ... [more]
CATA_NEIGO6.973e-3247.19Catalase OS=Neisseria gonorrhoeae GN=katA PE=3 SV=... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-399 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-005_F03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417469 ID=CF417469; Name=CF417469; organism=Citrus sinensis; type=EST; length=626bp
TCTCCTTTCTTACGATAATAATAACAGTAGCAAAATCTTCAGCAAGAAAT
ATCGCCATGGATCCCTACAAATTGCTTCCGTCAACTACTCACAATGCCCC
CTTTATGACTACAAATGCCGGCGCTCCTGTCTGGAACGACAATCACTCCT
TGACTGTTGGAAGTAGAGGTCCTGTCCTTCTTGAGGATTATCATCTGGTG
GAGAAACTAGCTCATTTTGCCAGGGAGAGGATTCCAGAACGTGTCGTCCA
TGCTAGGGGAGCCAGTGCTAAGGGTTTCTTTGAGTGCACCCATGATATTT
CTCACCTTACTTGTGCTGATCTTTTTCGAGCTCCAGGGGTTCAGACACCT
GTCATTGTTCGCTTCTCCACTGTTATCCATGAGCGGGGCAGCCCTGAGAC
ACTCAGGGATCCTCGAGGATTTGCAGTCAAGTTTTACACCAGAGAGGGTA
ATTGGGATCTTCTGGGTAACAGTATCCCTGTTTTTTTCATCCGTGATGCA
ATCAAATTCCCAGATGTGATCCATGCTTTTAAACCTAATCCAAAGTCTCA
CATCCAAGAGTACTGGAGGATCCTCGACTTCTGCTCCCACCTTCCTGAAA
GCTTGTCCACATTTTCCTGGTTCTTT
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