CF417504

Overview
NameCF417504
Unique NameCF417504
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATJ_MOUSE (Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2)

HSP 1 Score: 102.064 bits (253), Expect = 2.806e-22
Identity = 69/192 (35.94%), Postives = 99/192 (51.56%), Query Frame = 1
Query:   94 SDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVT----KFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN---DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 648
            + G Q+ D  L+AE  +  +K+K++K+Y+ +EE   R  V++ N+R  K     +    +  T    KF D T  EFR+        + +PA A   P    +    LP   DWR+ G VT V++QG CGSCW+F+A GA+EG  F  TG L  LS Q L+DC            + GC  G  + AFEY+L
Sbjct:   15 ASGAQAHDPKLDAE--WKDWKTKYAKSYSPKEEA-LRRAVWEENMRMIKLHNKENSLGKNNFTMKMNKFGDQTSEEFRKSI----DNIPIPA-AMTDPHAQNHVSIGLPDYKDWREEGYVTPVRNQGKCGSCWAFAAAGAIEGQMFWKTGNLTPLSVQNLLDCSKTVG-------NKGCQSGTAHQAFEYVL 191          

HSP 2 Score: 24.2534 bits (51), Expect = 2.806e-22
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  659 GVEREKDYPYTGTDG 703
            G+E E  YPY G DG
Sbjct:  195 GLEAEATYPYEGKDG 209          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATL2_PARTE (Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT00022898001 PE=3 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 2.810e-22
Identity = 65/173 (37.57%), Postives = 92/173 (53.18%), Query Frame = 1
Query:  142 FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            ++ +K K+++ Y +Q +  YRF+VF  NL   RA +      T    + +F+D++  EF   +L L    R+P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +   +   LSEQ LVDC    D E       GCNGG M+SAFEY+
Sbjct:   26 YANWKMKYNRRYTSQRDEMYRFKVFSDNLNYIRAFQDSTESATYTLELNQFADMSQQEFASTYLSL----RVPKTAKLNASNANFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNKKYELSEQDLVDCSGPYDNE-------GCNGGWMDSAFEYV 187          

HSP 2 Score: 25.0238 bits (53), Expect = 2.810e-22
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  659 GVEREKDYPYTGTDG 703
            G+   KDYPYT  DG
Sbjct:  191 GLAEAKDYPYTAKDG 205          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 3.647e-22
Identity = 45/87 (51.72%), Postives = 61/87 (70.11%), Query Frame = 1
Query:  388 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 648
            + LP   DWR+ G + GVKDQG+CGSCW+FSA  A+E  + + TG L+SLSEQ+LVDCD         S + GC+GGLM+ AFE+++
Sbjct:   16 DSLPESIDWREKGVLVGVKDQGSCGSCWAFSAVAAMESINAIVTGNLISLSEQELVDCDR--------SYNEGCDGGLMDYAFEFVI 94          

HSP 2 Score: 24.6386 bits (52), Expect = 3.647e-22
Identity = 8/16 (50.00%), Postives = 12/16 (75.00%), Query Frame = 2
Query:  656 GGVEREKDYPYTGTDG 703
            GG++ E+DYPY   +G
Sbjct:   97 GGIDTEEDYPYKERNG 112          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.046e-21
Identity = 58/169 (34.32%), Postives = 80/169 (47.34%), Query Frame = 1
Query:  151 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            FK   ++TY +  E   RF +F+  LR+     +     + T    + KFSD+T  EFR   L  N   R   +  +   L     P   DWR  G V  V++QG CGSCW+ S   A+E    + +G  V LS QQLVDC        +   + GCNGG   + FEY+
Sbjct:   26 FKKTHARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFR-DMLMKNEASRPNLEGLEVADLTVGAAPESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDC-------STSYGNHGCNGGFAVNGFEYV 186          

HSP 2 Score: 23.8682 bits (50), Expect = 1.046e-21
Identity = 8/19 (42.11%), Postives = 13/19 (68.42%), Query Frame = 2
Query:  644 YSRLGGVEREKDYPYTGTD 700
            Y +  G+E + DYPY+G +
Sbjct:  185 YVKDNGLESDADYPYSGKE 203          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CPGP2_ZINOF (Zingipain-2 OS=Zingiber officinale PE=1 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 1.057e-21
Identity = 45/87 (51.72%), Postives = 60/87 (68.97%), Query Frame = 1
Query:  388 NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 648
            +DLP   DWR++GAV  VK+QG CGSCW+FS   A+EG + + TG+L+SLSEQQLVDC          + + GC GG MN AF++I+
Sbjct:    1 DDLPDSIDWRENGAVVPVKNQGGCGSCWAFSTVAAVEGINQIVTGDLISLSEQQLVDCT---------TANHGCRGGWMNPAFQFIV 78          

HSP 2 Score: 26.1794 bits (56), Expect = 1.057e-21
Identity = 9/16 (56.25%), Postives = 11/16 (68.75%), Query Frame = 2
Query:  656 GGVEREKDYPYTGTDG 703
            GG+  E+ YPY G DG
Sbjct:   81 GGINSEETYPYRGQDG 96          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CYSP_THEPA (Cysteine proteinase OS=Theileria parva GN=TP03_0285 PE=3 SV=2)

HSP 1 Score: 103.219 bits (256), Expect = 1.401e-21
Identity = 69/211 (32.70%), Postives = 97/211 (45.97%), Query Frame = 1
Query:   97 DGEQSEDHLLNAE--HHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQF--------------------------LGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            DG  S+D  L  E    F  F SK+++ +ATQ+E   R   F++N    K ++  +P  V G+ +FSDLT  EF + F                            L + L    D   A +   N      DWR   +VT VKDQ  CG CW+FS  G++EG +     +   LS Q+L+DCD         S  +GC GGL+ SA+EY+
Sbjct:  108 DGFLSDDPKLEYEVYREFEEFNSKYNRRHATQQERLNRLVTFRSNYLEVKEQKGDEPY-VKGINRFSDLTEREFYKLFPVMKPPKATYSNGYYLLSHMANKTYLKNLKKALNTDEDVDLAKLTGEN-----LDWRRSSSVTSVKDQSNCGGCWAFSTVGSVEGYYMSHFDKSYELSVQELLDCD---------SFSNGCQGGLLESAYEYV 303          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATL1_PARTE (Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT00020990001 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 5.076e-21
Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 1
Query:  142 FSLFKSKFSKTYATQEEHDYRFRVFKANLR--RAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQ-KAPILPTNDLPTDFDWRDHGAVT--GVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            ++ +K K+++ Y  Q +  YR++VF  NL   RA      + T    + +F+D++  EF + +L L    ++P  A+  A          + DW D+  V    VK+QG+CGSCW+FSA GALE    +       LSEQ LVDC    D       + GCNGG M+SAFEY+
Sbjct:   26 YANWKMKYNRRYTNQRDEMYRYKVFTDNLNYIRAFYESPEEATFTLELNQFADMSQQEFAQTYLSL----KVPRTAKLNAANSNFQYKGAEVDWTDNKKVKYPAVKNQGSCGSCWAFSAVGALEINTDIELNRKYELSEQDLVDCSGPYD-------NDGCNGGWMDSAFEYV 187          

HSP 2 Score: 25.0238 bits (53), Expect = 5.076e-21
Identity = 9/15 (60.00%), Postives = 10/15 (66.67%), Query Frame = 2
Query:  659 GVEREKDYPYTGTDG 703
            G+   KDYPYT  DG
Sbjct:  191 GLAEAKDYPYTAKDG 205          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATV_GVCP (Viral cathepsin OS=Cydia pomonella granulosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.322e-21
Identity = 61/184 (33.15%), Postives = 92/184 (50.00%), Query Frame = 1
Query:  121 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADA---QKAPILPTND-----LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYIL 648
            L N++  F  F  K++KTY + EE   +   FK NL+    + +    AV  + ++SDL  +   R+  G    L+    A    +  ++   D     LP   DWRD   VT VK+Q  CGSCW+FS    +E  + +   + ++LSEQ LV+CD         + ++GC GGLM+ A E IL
Sbjct:   25 LNNSDELFKNFAIKYNKTYVSDEERAIKLENFKNNLKMINEKNMASKYAVFDINEYSDLNKNALLRRTTGFRLGLKKNPSAFTMTECSVVVIKDEPQALLPETLDWRDKHGVTPVKNQMECGSCWAFSTIANIESLYNIKYDKALNLSEQHLVNCD---------NINNGCAGGLMHWALESIL 199          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATLL_FASHE (Cathepsin L-like proteinase OS=Fasciola hepatica GN=Cat-1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 6.598e-21
Identity = 57/175 (32.57%), Postives = 92/175 (52.57%), Query Frame = 1
Query:  151 FKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDP----TAVHGVTKFSDLTPSEFRRQFLGLNRRLR------LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            +K  ++K Y   ++  +R  +++ N++  +   L       T   G+ +F+D+T  EF+ ++L    R        +P +A    +      P   DWR+ G VT VKDQG CGSCW+FS TG +EG +  +    +S SEQQLVDC            ++GC+GGLM +A++Y+
Sbjct:   24 WKRMYNKEYNGADDQ-HRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEFKAKYLTEMSRASDILSHGVPYEANNRAV------PDKIDWRESGYVTEVKDQGNCGSCWAFSTTGTMEGQYMKNERTSISFSEQQLVDCSGPWG-------NNGCSGGLMENAYQYL 184          

HSP 2 Score: 24.6386 bits (52), Expect = 6.598e-21
Identity = 9/20 (45.00%), Postives = 12/20 (60.00%), Query Frame = 2
Query:  644 YSRLGGVEREKDYPYTGTDG 703
            Y +  G+E E  YPYT  +G
Sbjct:  183 YLKQFGLETESSYPYTAVEG 202          
BLAST of CF417504 vs. ExPASy Swiss-Prot
Match: CATL1_SHEEP (Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.910e-20
Identity = 48/84 (57.14%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  394 LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYI 645
            +P   DW   G VT VK+QG CGSCW+FSATGALEG  F  TG+LVSLSEQ LVD             + GCNGGLM++AF+YI
Sbjct:    1 VPKSVDWTKKGYVTPVKNQGQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDSSRP-------QGNQGCNGGLMDNAFQYI 77          

HSP 2 Score: 24.2534 bits (51), Expect = 1.910e-20
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 2
Query:  656 GGVEREKDYPYTGTD 700
            GG++ E+ YPY  TD
Sbjct:   81 GGLDSEESYPYEATD 95          
The following BLAST results are available for this feature:
BLAST of CF417504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CATJ_MOUSE2.806e-2235.94Cathepsin J OS=Mus musculus GN=Ctsj PE=2 SV=2[more]
CATL2_PARTE2.810e-2237.57Cathepsin L 2 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CYSPL_SOLLC3.647e-2251.72Low-temperature-induced cysteine proteinase (Fragm... [more]
CATLL_PHACE1.046e-2134.32Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CPGP2_ZINOF1.057e-2151.72Zingipain-2 OS=Zingiber officinale PE=1 SV=1[more]
CYSP_THEPA1.401e-2132.70Cysteine proteinase OS=Theileria parva GN=TP03_028... [more]
CATL1_PARTE5.076e-2135.84Cathepsin L 1 OS=Paramecium tetraurelia GN=GSPATT0... [more]
CATV_GVCP5.322e-2133.15Viral cathepsin OS=Cydia pomonella granulosis viru... [more]
CATLL_FASHE6.598e-2132.57Cathepsin L-like proteinase OS=Fasciola hepatica G... [more]
CATL1_SHEEP1.910e-2057.14Cathepsin L1 OS=Ovis aries GN=CTSL PE=1 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-434 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A05 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417504 ID=CF417504; Name=CF417504; organism=Citrus sinensis; type=EST; length=704bp
CTCTCCTCTCTCCTCCTCCTCCTCCTATCTGCTGTGCTTGCGTCCGCCGT
AGCTGTCAGCGGCGACGATGCTATGATCAGACAGGTCGTGCCATCAGACG
GCGAACAATCCGAAGATCATCTCCTGAACGCGGAGCACCACTTCTCCCTC
TTCAAGTCCAAATTCTCCAAGACTTACGCCACTCAGGAGGAGCACGATTA
CCGATTCCGCGTGTTCAAGGCTAACCTCCGCCGAGCAAAGCGACGCCAGC
TCCTGGACCCCACTGCTGTCCACGGTGTCACCAAGTTCTCCGACTTAACG
CCGTCTGAATTCCGCCGTCAGTTCCTTGGCTTGAATAGGCGGCTTCGGCT
ACCAGCTGACGCTCAAAAGGCTCCTATCCTCCCTACCAACGATCTTCCTA
CTGACTTTGACTGGCGTGATCACGGCGCCGTTACTGGCGTCAAAGACCAG
GGCGCATGTGGATCGTGCTGGTCGTTTAGTGCAACCGGCGCTTTGGAGGG
AGCGCACTTCTTATCGACGGGCGAGCTTGTCAGCCTCAGTGAGCAACAGC
TTGTGGACTGTGATCACGAGTGTGATCCAGAGGAATCTGGTTCATGTGAC
TCTGGGTGCAATGGTGGGCTAATGAACTCTGCCTTTGAGTACATACTCNA
GGCTNGGTGGGGTTGAGCGAGAGAAGGACTACCCTTACACTGGGACCGAC
GGTG
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