CF417506

Overview
NameCF417506
Unique NameCF417506
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length623
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9678 contig Csv1_Contig9678:68..690. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417506 vs. ExPASy Swiss-Prot
Match: MDMC_STRMY (O-methyltransferase mdmC OS=Streptomyces mycarofaciens GN=mdmC PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.033e-24
Identity = 63/149 (42.28%), Postives = 91/149 (61.07%), Query Frame = 3
Query:  102 SVYPREPQCLKEIRELTDKHPWS-AMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKGWG 545
            SV  RE   L+E+ ++T + P   AM   P+EAQFL +L++L+ A+  +EIG FTGYS L  A A+P  G+I+  DI+ +    G P  Q+AGV   ID R G A   L +L ++    G FD VFVDADK  Y++Y+++ + LV+  G
Sbjct:   17 SVALREDGLLRELHDMTAQLPGGRAMQIMPEEAQFLGLLIRLVGARRVLEIGTFTGYSTLCMARALPAGGRIVTCDISDKWPGIGAPFWQRAGVDGLIDLRIGDAARTLAEL-RERDGDGAFDLVFVDADKAGYLHYYEQALALVRPGG 164          
BLAST of CF417506 vs. ExPASy Swiss-Prot
Match: CAMT2_DICDI (Probable caffeoyl-CoA O-methyltransferase 2 OS=Dictyostelium discoideum GN=omt6 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.704e-22
Identity = 53/143 (37.06%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  117 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKGWG 545
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ E+ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++  G
Sbjct:   35 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTEYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGG 173          
BLAST of CF417506 vs. ExPASy Swiss-Prot
Match: CAMT1_DICDI (Probable caffeoyl-CoA O-methyltransferase 1 OS=Dictyostelium discoideum GN=omt5 PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 3.795e-22
Identity = 52/143 (36.36%), Postives = 91/143 (63.64%), Query Frame = 3
Query:  117 EPQCLKEIRELTDKHPWSAMMTAPDEAQFLSMLLKLINAKNTMEIGVFTGYSLLATALAIPDDGKILALDITKEHYEKGLPIIQKAGVAHKIDFREGPALPLLDQLIQDEKYHGTFDFVFVDADKNNYINYHKRLIELVKGWG 545
            + + ++  +E  ++H    M+T  ++  F  +L++++NAK T++IGVFTG S L  ALA+ D+G+++A D++ ++ +  L    KAGV HKI+ +  PA   L +LI D+    T+DFVF+DADK  Y  Y++  ++L++  G
Sbjct:   34 QKELIQFTKENIERH---IMLTQAEQCSFFKLLIQVLNAKKTIDIGVFTGLSSLTAALAMGDEGRVVACDVSTDYTQHALKFWAKAGVDHKINLKIQPASKTLQELI-DQGEENTYDFVFIDADKTGYDTYYELSLKLIRKGG 172          
The following BLAST results are available for this feature:
BLAST of CF417506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
MDMC_STRMY9.033e-2442.28O-methyltransferase mdmC OS=Streptomyces mycarofac... [more]
CAMT2_DICDI1.704e-2237.06Probable caffeoyl-CoA O-methyltransferase 2 OS=Dic... [more]
CAMT1_DICDI3.795e-2236.36Probable caffeoyl-CoA O-methyltransferase 1 OS=Dic... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-436 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417506 ID=CF417506; Name=CF417506; organism=Citrus sinensis; type=EST; length=623bp
GGGAAGGTCAGGAGGAAAACAAGGATCGTTACTACAAAACTCTACATGGG
AACAAGACCCTTTTACAGAGTGAAAAACTTTATGAGTATATACTTGAAAC
CAGTGTATATCCAAGAGAACCACAATGCTTGAAGGAGATCCGCGAGTTGA
CGGACAAGCATCCATGGAGCGCCATGATGACTGCACCTGATGAAGCACAA
TTTTTGAGCATGCTACTCAAGCTTATCAATGCCAAGAATACCATGGAAAT
TGGCGTTTTCACTGGTTACTCTCTCCTAGCCACTGCCCTCGCCATTCCCG
ACGATGGCAAGATACTGGCCCTGGACATCACCAAGGAACACTACGAGAAG
GGTCTCCCTATAATTCAAAAAGCTGGTGTTGCCCACAAGATTGATTTCAG
AGAAGGCCCTGCTCTTCCTCTTCTTGATCAATTGATCCAAGACGAAAAAT
ATCATGGGACATTCGACTTCGTCTTTGTTGATGCTGACAAGAATAACTAC
ATTAATTACCACAAGAGGCTTATTGAGCTTGTGAAGGGTTGGGGGAGTGA
TTGGCTACGACAACACCTTGTGGGGTGGGATCTGTGGTGGCACAACCTGA
TGCCGACCTGGATGAGCTAATCT
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