CF417508

Overview
NameCF417508
Unique NameCF417508
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 389.037 bits (998), Expect = 1.061e-107
Identity = 192/212 (90.57%), Postives = 201/212 (94.81%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS+VLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AA+K HEIDPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNLS  RNP LDYGFKG EIAMA+YCSELQ+
Sbjct:  259 NGTPVGSGLASVVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLVEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAVASIGKLMFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGTEIAMASYCSELQY 470
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 3.086e-107
Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLASIVLFEANIL VLSEV+SAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY++AA+K HEIDPLQKPKQDRYALRTSPQWLGPQ EVIR STKSIEREINSVNDNPLI VSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFS+LVND+Y+NGLPSNL+  RNP LDYGFKGAEIAMA+YCSELQ+
Sbjct:  256 NGTAVGSGLASIVLFEANILAVLSEVISAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYIKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRFSTKSIEREINSVNDNPLISVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSDLVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQY 467
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 387.497 bits (994), Expect = 3.086e-107
Identity = 191/212 (90.09%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS+VLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY++AA+K HEIDPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNL+  RNP LDYGFKGAEIAMA+YCSELQ+
Sbjct:  257 NGTAVGSGLASMVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKAAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQY 468
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 6.874e-107
Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLASIVLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV+AA+K HE+DPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKL+FAQFSELVNDFY+NGLPSNLS  RNP LDYGFKG+EIAMA+YCSELQ+
Sbjct:  268 NGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQY 479
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 386.341 bits (991), Expect = 6.874e-107
Identity = 190/212 (89.62%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLASIVLFEANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS+YV+AA+K HE+DPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKL+FAQFSELVNDFY+NGLPSNLS  RNP LDYGFKG+EIAMA+YCSELQ+
Sbjct:  267 NGTAVGSGLASIVLFEANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSAYVKAAKKLHEMDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLLFAQFSELVNDFYNNGLPSNLSASRNPSLDYGFKGSEIAMASYCSELQY 478
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.531e-106
Identity = 188/212 (88.68%), Postives = 200/212 (94.34%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS+ LFE N+L VLSE+LSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV+AAQK H+IDPLQKPKQDRYALRTSPQWLGPQ EVIR +TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVNDFY+NGLPSNL+G RNP LDYGFKGAEIAMA+YCSELQ+
Sbjct:  262 NGTAVGSGLASLALFETNLLVVLSEILSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSYYVKAAQKVHDIDPLQKPKQDRYALRTSPQWLGPQIEVIRNATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDFYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQY 473
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 385.185 bits (988), Expect = 1.531e-106
Identity = 187/212 (88.21%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VLF++NIL V+SEVLSAIFAE M GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIRA+TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVND+Y+NGLPSNL+  RNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  259 NGTAVGSGMASMVLFDSNILAVMSEVLSAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRAATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNARLALASIGKLMFAQFSELVNDYYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQF 470
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 2.000e-106
Identity = 189/212 (89.15%), Postives = 200/212 (94.34%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+GLAS+VLFEAN+L +LSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQI AAAIMEHILDGS+YV+ AQK HEIDPLQKPKQDR+ALRTSPQWLGP  EVIR STK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLAIASIGKLMFAQFSELVND Y+NGLPSNL+GGRNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  255 NGTAVGSGLASMVLFEANVLAILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIVAAAIMEHILDGSAYVKEAQKLHEIDPLQKPKQDRHALRTSPQWLGPLIEVIRTSTKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLAIASIGKLMFAQFSELVNDLYNNGLPSNLTGGRNPSLDYGFKGAEIAMASYCSELQF 466
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_PHAVU (Phenylalanine ammonia-lyase class 1 (Fragment) OS=Phaseolus vulgaris PE=2 SV=2)

HSP 1 Score: 384.415 bits (986), Expect = 2.612e-106
Identity = 189/212 (89.15%), Postives = 201/212 (94.81%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+ASIVLF+ANIL VLSEVLSAIFAE MQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSY++ A+K HEIDPLQKPKQDRYALRTSPQWLGP  EVIR STKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDN+RLA+ASIGKLMFAQFSELVNDFY+NGLPSNL+  RNP LDYGFKGAEIAMA+YCSELQ+
Sbjct:   50 NGTAVGSGMASIVLFDANILAVLSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYMKDAKKLHEIDPLQKPKQDRYALRTSPQWLGPLIEVIRFSTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNTRLALASIGKLMFAQFSELVNDFYNNGLPSNLTASRNPSLDYGFKGAEIAMASYCSELQY 261
[Close]
BLAST of CF417508 vs. ExPASy Swiss-Prot
Match: PAL1_LITER (Phenylalanine ammonia-lyase 1 OS=Lithospermum erythrorhizon PE=2 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 2.612e-106
Identity = 186/212 (87.74%), Postives = 202/212 (95.28%), Query Frame = 2 
Query:    2 NGTGVGAGLASIVLFEANILTVLSEVLSAIFAEAMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVEAAQKFHEIDPLQKPKQDRYALRTSPQWLGPQAEVIRASTKSIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVSMDNSRLAIASIGKLMFAQFSELVNDFYSNGLPSNLSGGRNPCLDYGFKGAEIAMAAYCSELQF 637
            NGT VG+G+AS+VL+EANIL VLSEV+SAIFAE M GKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGS YV+AAQK HE+DPLQKPKQDRYALRTSPQWLGPQ EVIR++TK IEREINSVNDNPLIDVSRNKALHGGNFQGTPIGV+MDN+RLAIASIGKL+FAQFSELVND+Y+NGLPSNL+G RNP LDYGFKGAEIAMA+YCSELQF
Sbjct:  254 NGTAVGSGMASMVLYEANILAVLSEVISAIFAEVMNGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSGYVKAAQKLHEMDPLQKPKQDRYALRTSPQWLGPQIEVIRSATKMIEREINSVNDNPLIDVSRNKALHGGNFQGTPIGVAMDNTRLAIASIGKLLFAQFSELVNDYYNNGLPSNLTGSRNPSLDYGFKGAEIAMASYCSELQF 465
The following BLAST results are available for this feature:
BLAST of CF417508 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 250
Match NameE-valueIdentityDescription
PALY_STYHU1.061e-10790.57Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL2_PHAVU3.086e-10789.62Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL1_SOYBN3.086e-10790.09Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL2_PEA6.874e-10789.62Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PEA6.874e-10789.62Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL2_CICAR1.531e-10688.68Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_TOBAC1.531e-10688.21Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_POPKI2.000e-10689.15Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL1_PHAVU2.612e-10689.15Phenylalanine ammonia-lyase class 1 (Fragment) OS=... [more]
PAL1_LITER2.612e-10687.74Phenylalanine ammonia-lyase 1 OS=Lithospermum eryt... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-438 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417508 ID=CF417508; Name=CF417508; organism=Citrus sinensis; type=EST; length=639bp
TAACGGAACAGGAGTGGGTGCTGGCTTGGCTTCTATTGTTCTTTTTGAGG
CTAATATTTTAACTGTTTTGTCCGAAGTTTTGTCAGCAATTTTTGCGGAA
GCTATGCAAGGAAAGCCTGAGTTTACGGATCATTTGACTCACAAGCTGAA
GCATCACCCTGGACAAATTGAAGCTGCAGCTATAATGGAACATATCTTGG
ATGGTAGCTCTTATGTTGAGGCAGCACAAAAATTCCATGAAATTGACCCT
TTACAGAAGCCTAAGCAAGATCGGTATGCTCTTCGAACTTCACCACAATG
GTTAGGCCCTCAAGCTGAAGTGATTCGAGCATCGACAAAGTCTATTGAGA
GGGAGATTAACTCTGTGAATGATAATCCGTTGATTGATGTTTCAAGGAAC
AAGGCATTACACGGTGGCAATTTCCAGGGCACTCCAATTGGTGTCTCTAT
GGATAATTCAAGATTGGCAATTGCTTCGATTGGGAAACTCATGTTTGCTC
AATTTTCTGAGCTGGTTAATGATTTTTACAGTAATGGGTTGCCTTCAAAT
CTGTCTGGTGGTAGGAATCCATGCTTGGATTATGGGTTCAAAGGTGCCGA
AATAGCAATGGCTGCGTATTGTTCCGAGCTCCAGTTTCT
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