CF417510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: BIB_DROME (Neurogenic protein big brain OS=Drosophila melanogaster GN=bib PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 9.511e-13 Identity = 51/157 (32.48%), Postives = 78/157 (49.68%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAH--GYTKGDGLGAEIIGTFVLVYTVFSATD 642 E+++ F+R+ I+E +A+F++++I GV + S + A A G + L C ISG HINPAVT L + R +S RA Y+ QC G I GA ++ G Y+ G ++H + G E I TF++V F +TD Sbjct: 58 EIRTLEFWRSIISECLASFMYVFIVCGAAAGVGVGASVSSV--LLATALASGLAMATLTQCFLHISGAHINPAVTLALCVVRSISPIRAAMYITAQCGGGIAGAALLYGVT-VPGYQ--GNLQAAISHSAALAAWERFGVEFILTFLVVLCYFVSTD 209
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: YI7H_SCHPO (Uncharacterized membrane protein C977.17 OS=Schizosaccharomyces pombe GN=SPAC977.17 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 58/171 (33.92%), Postives = 74/171 (43.27%), Query Frame = 1 Query: 196 FYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQG------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKG--------FEGSKNYERLGGGANVVAHG---YTKGDGLGAEIIGTFVLVYTVFSATDAKXTP 657 F+R G AEF+ T VL V GV + T G G AW FG M+ VY GISGGH+NPAVT L + RK + Y+ Q GA G + G FEG K+ G + + T + E IGT VLV +F+ D +P Sbjct: 309 FFREGFAEFLGTL------VLVVFGVGSNLQATVTNGAGGSFESLSFAWGFGCMLG--VYIAGGISGGHVNPAVTISLAIFRKFPWYKVPIYIFFQIWGAFFGGALAYGYHWSSITEFEGGKDIRTPATGGCLYTNPKPYVTWRNAFFDEFIGTAVLVGCLFAILDDTNSP 471
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP31_MAIZE (Aquaporin TIP3-1 OS=Zea mays GN=TIP3-1 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 51/145 (35.17%), Postives = 76/145 (52.41%), Query Frame = 1 Query: 202 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 633 RA I+EF+AT +F++ +V+ + K ST G + +A A + V ISGGH+NPAVTFG L+ ++SL RAV Y V Q LGA+ +++ G R G A +A G + E + TF L+Y ++ Sbjct: 26 RAAISEFIATAIFVFAAEGSVLSLGKMYHDMSTAGGLVAVALAHALALAVAVAVAVNISGGHVNPAVTFGALVGGRVSLVRAVLYWVAQLLGAVAATLLLRLATGGM---RPPGFA--LASGVGDWHAVLLEAVMTFGLMYAYYA 165
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP23_MAIZE (Aquaporin TIP2-3 OS=Zea mays GN=TIP2-3 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 51/152 (33.55%), Postives = 78/152 (51.32%), Query Frame = 1 Query: 202 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 648 +A +AEF+AT LF++ V + + S+ G+ IA A +F V A ISGGH+NPAVTFGL + +++ + Y V Q LGA +++ + G G ++ +G+ EI+ TF LVYTV+ +A D K Sbjct: 19 KAYVAEFIATLLFVFAGVGSAIAYSQLTKGGALDPAGLVAIAIAHAFALFVGVSMAANISGGHLNPAVTFGLAVGGHITILTGILYWVAQLLGASVACFLLQYVTHGQAIPTHG------VSGISEIEGVVMEIVITFALVYTVYATAADPK 164
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: MIP_CAVPO (Lens fiber major intrinsic protein OS=Cavia porcellus GN=MIP PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.242e-12 Identity = 53/157 (33.76%), Postives = 76/157 (48.41%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 648 EL+S SF+RA AEF AT +++ +G S + + +A AFG + LV ISG H+NPAVTF L+ ++SL RA YM Q LGA+ GA V+ + + R N + G + EI T V +F+ D + Sbjct: 3 ELRSASFWRAIFAEFFATLFYVFFG----LGASLRWAP-GPLHVLQVALAFGLALAXLVQTVGHISGAHVNPAVTFXFLVGSQMSLLRAFCYMAAQLLGAVAGAAVL--YSVTPPAVRGNLALNTLHAGVSVXQATTVEIFLTLQFVLCIFATYDER 152
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP43_MAIZE (Aquaporin TIP4-3 OS=Zea mays GN=TIP4-3 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 50/155 (32.26%), Postives = 76/155 (49.03%), Query Frame = 1 Query: 175 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAG--ISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 633 GE F+R + E + TFLF++I V M + TK ST G A A G + V TAG ISGGH+NPAVT L + ++L R+ Y+ Q L + +++ G L + +A G G+ AE + TF L++ +++ Sbjct: 10 GEASEPDFFRGVLGELVLTFLFVFIGVGAAM-TDGATTKGSTAGGDLTAVALGQALVVAVIATAGFHISGGHVNPAVTLSLAVGGHVTLFRSSLYIAAQMLASSAACFLLRWLTGG-----LATPVHALAEGVGPLQGVVAEAVFTFSLLFVIYA 158
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP32_MAIZE (Aquaporin TIP3-2 OS=Zea mays GN=TIP3-2 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 50/148 (33.78%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 202 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV----GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 633 RA I+EF+AT +F++ +V+ + K ST+ G+ +A A + V +SGGH+NPAVTFG L+ ++SL RAV Y Q LGA+ +++ G R G A +A G G + E + TF VY ++ Sbjct: 28 RAAISEFIATAIFVFAAEGSVLSLGKMYHDHSTISTAGGLVAVALAHALGLAVAVAVAVNVSGGHVNPAVTFGALVGGRVSLVRAVLYWAAQLLGAVAATLLLRLATGG---ARPPGFA--LASGVGDGHAVLLEAVMTFGFVYAYYA 170
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.119e-12 Identity = 54/165 (32.73%), Postives = 80/165 (48.48%), Query Frame = 1 Query: 163 LFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 648 ++ PG LK A AEF++T +F++ + M SK + G+ A A +F V A ISGGH+NPAVTFG + ++L R + Y V Q LG+ +++ G + G G + + L EI+ TF LVYTV+ +A D K Sbjct: 14 VYHPGALK------AAFAEFISTLIFVFAGQGSGMAFSKLTGGGPTTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFG------LTGVSVWEALVLEIVMTFGLVYTVYATAVDPK 166
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.767e-12 Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 1 Query: 163 LFEPGELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTV--GIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 648 ++ PG LK A +AEF++T +F++ + M SK +T G+ A A +F V A ISGGH+NPAVTFG + ++L R + Y + Q LG+ +++ G G G + + L EI+ TF LVYTV+ +A D K Sbjct: 14 VYHPGALK------AALAEFISTLIFVFAGQGSGMAFSKLTGGGATTPAGLIAAAVAHAFALFVAVSVGANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFG------LTGVSVWEALVLEIVMTFGLVYTVYATAVDPK 166
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQPZ_GLOVI (Aquaporin Z OS=Gloeobacter violaceus GN=aqpZ PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.614e-12 Identity = 51/159 (32.08%), Postives = 76/159 (47.80%), Query Frame = 1 Query: 193 SFYRAGIAEFMATF-LFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAH------GYTKGDGLGAEIIGTFVLVYTVFSATDAK 648 S + +AEF+ TF L L V+ + N +G G++ AFG + + + ISG HINPAV+ GL A++ T + Y+ Q LG I GAGV+ G K L GG + GYT L E++ TF+ + + +TD + Sbjct: 2 SLVKRSVAEFIGTFWLVLGGCGAAVLAAAFPNLG---IGFAGVSLAFGLTLLTMAFAIGHISGCHINPAVSIGLWAAKRFPATELLPYIAAQVLGGIAGAGVLYLIAGGKAGFSLSGGFASNGYGLHSPGGYTLLACLVCEVVMTFMFLMIILGSTDRR 157 The following BLAST results are available for this feature:
BLAST of CF417510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417510 ID=CF417510; Name=CF417510; organism=Citrus sinensis; type=EST; length=725bpback to top |