CF417510

Overview
NameCF417510
Unique NameCF417510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP31_ORYSJ (Probable aquaporin TIP3-1 OS=Oryza sativa subsp. japonica GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 38/94 (40.43%), Postives = 57/94 (60.64%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVG-IQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAI 480
            RA I+EF+AT +F++    +++ + K     ST G +  ++ A    +   V     ISGGH+NPA+TFG LL  +LSL RA+FY + Q LGA+
Sbjct:   27 RAAISEFLATAIFVFAAEGSILSLGKLYQDMSTPGGLVAVSLAHALALAVAVAVAVNISGGHVNPAITFGALLGGRLSLIRALFYWLAQLLGAV 120          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.720e-12
Identity = 53/157 (33.76%), Postives = 86/157 (54.78%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAI-CGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLG----AEIIGTFVLVYTVF-SATDAK 648
            +AG+AEF++TF+F++    + +  +K  ++   +  G+   + A    +F  V   A ISGGH+NPAV FG  +   ++L R + Y++ Q LG+I C A +V               ++V A G ++G G+G     EI+ TF LVYTV+ +A D K
Sbjct:   21 KAGLAEFISTFIFVFAGSGSGIAYNKLTNDGAATPAGLISASIAHAFALFVAVSVGANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLV-----------FVTASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPK 165          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP51_ORYSJ (Probable aquaporin TIP5-1 OS=Oryza sativa subsp. japonica GN=TIP5;1 PE=2 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12
Identity = 52/156 (33.33%), Postives = 76/156 (48.72%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYI----TVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIG---TFVLVYTVFSATDAK 648
            RA  AEF +TFLF++I    T+   M      +  S++    +A AFG  +FA V+  A +SGGH+NPAVTF   +   +++  A+FY   Q LG+     V+             G A        +  G GA I+    TF++VYTV  A D +
Sbjct:   18 RAYFAEFFSTFLFVFIAVGSTISARMLTPDETSDASSLMATAVAQAFG--LFAAVFIAADVSGGHVNPAVTFAYAIGGHITVPSAIFYWASQMLGSTFACLVLHYIS--------AGQAVPTTRIAVEMTGFGAGILEGVLTFMVVYTVHVAGDPR 163          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQPM_METTM (Aquaporin aqpM OS=Methanobacterium thermoautotrophicum (strain Marburg / DSM 2133) GN=aqpM PE=1 SV=3)

HSP 1 Score: 71.2478 bits (173), Expect = 6.165e-12
Identity = 51/164 (31.10%), Postives = 76/164 (46.34%), Query Frame = 1
Query:  211 IAEFMATFLFLY-------ITVLTVMGVSKSNTKCSTVGIQG-------IAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPE 660
            IAEF+ TF+ ++       +T++   G +  N     +G+ G       I  AFG  I A +Y    ISG HINPAVT GL   +K      V Y++ Q LGA  G+ +     G       G GA     G +    + AE++GTF+L+ T+      +  P+
Sbjct:    9 IAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHINPAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIMGIAVDERAPK 172          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP41_ARATH (Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.052e-11
Identity = 49/144 (34.03%), Postives = 76/144 (52.78%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFS 633
            +A I EF+ TFLF++  V + M    S    + VG+  +A A    + A++     ISGGH+NPAVT GLLL   +S+ RA  Y + Q L +     ++    G      +G   + +A G +   G+  EII TF L++TV++
Sbjct:   19 KALIVEFITTFLFVFAGVGSAMATD-SLVGNTLVGLFAVAVAHA-FVVAVMISAGHISGGHLNPAVTLGLLLGGHISVFRAFLYWIDQLLASSAACFLLSYLTGG-----MGTPVHTLASGVSYTQGIIWEIILTFSLLFTVYA 155          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.882e-11
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  301 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 645
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSS 153          

HSP 2 Score: 20.7866 bits (42), Expect = 1.882e-11
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  684 PLPIGFAVFLVHL 722
            P+ IGF + L+HL
Sbjct:  161 PIAIGFGLTLIHL 173          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.882e-11
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  301 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 645
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSS 153          

HSP 2 Score: 20.7866 bits (42), Expect = 1.882e-11
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  684 PLPIGFAVFLVHL 722
            P+ IGF + L+HL
Sbjct:  161 PIAIGFGLTLIHL 173          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.882e-11
Identity = 42/120 (35.00%), Postives = 60/120 (50.00%), Query Frame = 1
Query:  301 VGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDA 645
            +G  G+A AFG  +  + Y   GISGGH NPAV+ GL +A +L     + Y V Q LGAI  A ++      K+    GG A+     +   GY+   GL  EII T   +  +  +T +
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILYVIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSS 153          

HSP 2 Score: 20.7866 bits (42), Expect = 1.882e-11
Identity = 7/13 (53.85%), Postives = 10/13 (76.92%), Query Frame = 3
Query:  684 PLPIGFAVFLVHL 722
            P+ IGF + L+HL
Sbjct:  161 PIAIGFGLTLIHL 173          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP2_TALEU (Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.059e-11
Identity = 42/104 (40.38%), Postives = 58/104 (55.77%), Query Frame = 1
Query:  187 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 498
            S +F RA  AEF+AT +F++  + + +     N + S   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVFAEFLATLIFVFFGLGSAL-----NWQQSLPSVLQIAMAFGLAIGTLVQALGHISGAHINPAVTVACLVGCHVSFLRAAFYVAAQLLGAVAGAALL 99          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP2_PROHA (Aquaporin-2 (Fragment) OS=Procavia capensis habessinica GN=AQP2 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.219e-11
Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query:  187 SWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVV 498
            S +F RA ++EF+AT LF++  + + +     N   +   +  IA AFG  I  LV     ISG HINPAVT   L+   +S  RA+FY+  Q LGA+ GA ++
Sbjct:    1 SIAFSRAVLSEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQTLGHISGAHINPAVTIACLVGCHVSFLRALFYLAAQLLGAVAGAALL 99          
The following BLAST results are available for this feature:
BLAST of CF417510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
TIP31_ORYSJ4.720e-1240.43Probable aquaporin TIP3-1 OS=Oryza sativa subsp. j... [more]
TIP1_MEDSA4.720e-1233.76Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP51_ORYSJ6.165e-1233.33Probable aquaporin TIP5-1 OS=Oryza sativa subsp. j... [more]
AQPM_METTM6.165e-1231.10Aquaporin aqpM OS=Methanobacterium thermoautotroph... [more]
TIP41_ARATH1.052e-1134.03Aquaporin TIP4-1 OS=Arabidopsis thaliana GN=TIP4-1... [more]
AQPZ_BRUME1.882e-1135.00Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BRUAB1.882e-1135.00Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA21.882e-1135.00Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
AQP2_TALEU3.059e-1140.38Aquaporin-2 (Fragment) OS=Talpa europaea GN=AQP2 P... [more]
AQP2_PROHA5.219e-1139.42Aquaporin-2 (Fragment) OS=Procavia capensis habess... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-440 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417510 ID=CF417510; Name=CF417510; organism=Citrus sinensis; type=EST; length=725bp
ATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAAT
GGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGA
GGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCA
CCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTA
CAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCA
CTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACT
GTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCT
TGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGA
CCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTC
TACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTCAA
GGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAGCCAATG
TTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAGATTATT
GGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAN
AACGCCAGAGATTCTCATGTCCCTATTTTGGNCCCCCTCCCCATTGGATT
TGCTGTTTTCTTGGTCCACCTGGCC
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