CF417510
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP4_RAT (Aquaporin-4 OS=Rattus norvegicus GN=Aqp4 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654 +F++A AEF+A +F+ ++V + + S V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGAI GAG++ +GG HG T G GL E+I TF LV+T+F++ D+K T Sbjct: 33 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP4_NOTAL (Aquaporin-4 OS=Notomys alexis GN=AQP4 PE=2 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.239e-20 Identity = 61/155 (39.35%), Postives = 90/155 (58.06%), Query Frame = 1 Query: 193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654 +F++A AEF+A +F+ ++V + + S V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGAI GAG++ +GG HG T G GL E+I TF LV+T+F++ D+K T Sbjct: 36 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLP-VDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPP---NVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 186
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP4_HUMAN (Aquaporin-4 OS=Homo sapiens GN=AQP4 PE=1 SV=2) HSP 1 Score: 98.9821 bits (245), Expect = 2.761e-20 Identity = 60/155 (38.71%), Postives = 92/155 (59.35%), Query Frame = 1 Query: 193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654 +F++A AEF+A +F+ +++ + + + K V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGAI GAG++ +GG + HG T G GL E+I TF LV+T+F++ D+K T Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGTE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP4_DIPME (Aquaporin-4 OS=Dipodomys merriami GN=AQP4 PE=2 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.606e-20 Identity = 62/156 (39.74%), Postives = 91/156 (58.33%), Query Frame = 1 Query: 193 SFYRAGIAEFMATFLFLYITV-LTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654 +F++A AEF+A +F+ +++ T+ K N V + I+ FG I +V C ISGGHINPAVT ++ RK+S+ ++VFY+ QCLGAI GAG++ +GG HG T G GL E+I TF LV+T+F++ D+K T Sbjct: 33 AFWKAVTAEFLAMLIFVLLSLGSTINWGGKENPL--PVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP5_PIG (Aquaporin-5 OS=Sus scrofa GN=AQP5 PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19 Identity = 59/162 (36.42%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPEI 663 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+T LL+ ++SL RAVFY+V Q +GAI GAG++ G L N + + T G + E+I TF L +FS+TD++ T + Sbjct: 4 EVCSLAFLKAVFAEFLATLIFVFFGLASAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAVFYVVAQLVGAIAGAGILYGLAPGNARGNL--AVNSLNNNTTPGQAVVVEMILTFQLALCIFSSTDSRRTSPV 158
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP4_BOVIN (Aquaporin-4 OS=Bos taurus GN=AQP4 PE=2 SV=3) HSP 1 Score: 95.9005 bits (237), Expect = 2.337e-19 Identity = 58/155 (37.42%), Postives = 91/155 (58.71%), Query Frame = 1 Query: 193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHG-YTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654 +F++A AEF+A +F+ +++ + + + K V + I+ FG I +V C ISGGHINPAVT ++ R++S+ ++VFY+ QCLGAI GAG++ +GG HG + G GL E+I TF LV+T+F++ D+K T Sbjct: 33 TFWKAVTAEFLAMLIFVLLSLGSTINWGGAE-KPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCTRRISIAKSVFYIAAQCLGAIIGAGILYLVTPP---SVVGGLGVTTVHGNLSAGHGLLVELIITFQLVFTIFASCDSKRT 183
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP5_SHEEP (Aquaporin-5 OS=Ovis aries GN=AQP5 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.584e-18 Identity = 56/162 (34.57%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPEI 663 E+ S +F +A AEF+AT +F++ + + + + + I+ AFG I + +SGGH+NPA+T LL+ ++SL RAVFY+V Q +GAI GA ++ G L N + + T G + AE+I TF L VFS+TD++ T + Sbjct: 4 EVCSAAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSAMPSVLQISLAFGLAIGTMAQALGPVSGGHMNPAITLALLVGNQISLLRAVFYLVAQLVGAIAGAAILYGLAPYNARSNL--AVNALNNNTTAGQAVVAEMILTFQLALCVFSSTDSRRTSPV 158
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP5_MOUSE (Aquaporin-5 OS=Mus musculus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.408e-18 Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPEI 663 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+T LL+ ++SL RA+FY+ Q +GAI GAG++ L N +++ T G + E+I TF L +FS+TD++ T + Sbjct: 4 EVCSVAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAIFYVAAQLVGAIAGAGILYWLAPGNARGNL--AVNALSNNTTPGKAVVVELILTFQLALCIFSSTDSRRTSPV 158
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP5_RAT (Aquaporin-5 OS=Rattus norvegicus GN=Aqp5 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPEI 663 E+ S +F++A AEF+AT +F++ + + + + I I+ AFG I L +SGGHINPA+T LL+ ++SL RAVFY+ Q +GAI GAG++ L N + + T G + E+I TF L +FS+TD++ T + Sbjct: 4 EVCSLAFFKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQISIAFGLAIGTLAQALGPVSGGHINPAITLALLIGNQISLLRAVFYVAAQLVGAIAGAGILYWLAPLNARGNL--AVNALNNNTTPGKAMVVELILTFQLALCIFSSTDSRRTSPV 158
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP5_HUMAN (Aquaporin-5 OS=Homo sapiens GN=AQP5 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.518e-18 Identity = 56/162 (34.57%), Postives = 87/162 (53.70%), Query Frame = 1 Query: 178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXTPEI 663 E+ S +F +A AEF+AT +F++ + + + + I IA AFG I L +SGGHINPA+T LL+ ++SL RA FY+ Q +GAI GAG++ G L N + + T+G + E+I TF L +F++TD++ T + Sbjct: 4 EVCSVAFLKAVFAEFLATLIFVFFGLGSAL-----KWPSALPTILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARGNL--AVNALNNNTTQGQAMVVELILTFQLALCIFASTDSRRTSPV 158 The following BLAST results are available for this feature:
BLAST of CF417510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 126
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417510 ID=CF417510; Name=CF417510; organism=Citrus sinensis; type=EST; length=725bpback to top |