CF417510

Overview
NameCF417510
Unique NameCF417510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length725
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP_ANOGA (Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP008842 PE=3 SV=4)

HSP 1 Score: 88.1965 bits (217), Expect = 4.873e-17
Identity = 54/155 (34.84%), Postives = 84/155 (54.19%), Query Frame = 1
Query:  193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKXT 654
            + +R  +AEF+ TF  + I + +  G +  +   +      IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GAI GA V+K    S   E +GG G   +A G + G G+  E + TF+LV+ V    D + T
Sbjct:   21 NIWRMLVAEFLGTFFLVAIGIGSTTGWTDYSPTLTQ-----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLIVTADVSILKGAFYIVSQCIGAIAGAAVIKAATPS---EVVGGLGVTGIAPGLSTGQGVLIEALITFMLVFVVHGVCDNRRT 167          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP21_ARATH (Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.365e-17
Identity = 58/152 (38.16%), Postives = 84/152 (55.26%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 648
            RA +AEF++T LF++  V + +  +K  S+    T G+  IA   G  +F  V   A ISGGH+NPAVTFGL +  ++++   VFY + Q LG+     ++K   G      L    + VA G    +G+  EII TF LVYTV+ +A D K
Sbjct:   19 RAYLAEFISTLLFVFAGVGSAIAYAKLTSDAALDTPGLVAIAVCHGFALFVAVAIGANISGGHVNPAVTFGLAVGGQITVITGVFYWIAQLLGSTAACFLLKYVTGG-----LAVPTHSVAAGLGSIEGVVMEIIITFALVYTVYATAADPK 165          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: MIP_CHICK (Lens fiber major intrinsic protein OS=Gallus gallus GN=MIP PE=1 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 60/156 (38.46%), Postives = 85/156 (54.49%), Query Frame = 1
Query:  178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKS-NTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 642
            EL+S SF+RA +AEF+ + L+      T++G+  S        G+ G A AFG     LV     +SGGHINPA+T   LLA +LSL RA+ Y++ Q LGA+ GAGV+ G   +     LG  A   + G   G G   E++ T   +  VF++ D
Sbjct:    3 ELRSSSFWRAILAEFLGSLLY------TLLGLGASLRWAPGPHGVLGSALAFGLAQATLVQALGHVSGGHINPAITLAFLLASQLSLPRALGYLLAQLLGALAGAGVLYGVTPAAVRGTLGLSALHPSVG--PGQGTVVELLLTAQFILCVFASFD 150          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP_AEDAE (Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 52/151 (34.44%), Postives = 79/151 (52.32%), Query Frame = 1
Query:  193 SFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGG-GANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATD 642
            + +R  +AEF+ TF  + I + + MG         T     IA+ FG ++  L      +SG HINPAVT GL++   +S+ +  FY+V QC+GAI GA ++K    S   + +GG G   +    T G G+  E + TF+LV+ V    D
Sbjct:   21 NIWRMLVAEFLGTFFLVSIGIGSTMGWGGDYAPTMTQ----IAFTFGLVVATLAQAFGHVSGCHINPAVTIGLMITADISILKGAFYIVSQCVGAIAGAALIKAATPS---DVIGGLGVTGIDPRLTAGQGVMIEALITFILVFVVHGVCD 164          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP23_ARATH (Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 58/165 (35.15%), Postives = 87/165 (52.73%), Query Frame = 1
Query:  175 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAK 648
            G+  S S  +A ++EF+AT LF++  V + +  +K  S+      G+  IA A    +F  V   A ISGGH+NPAVT GL +   ++L    FY + QCLG+I    ++           +  G +V  HG + G    +G+  EI+ TF LVYTV+ +A D K
Sbjct:   10 GDSFSVSSLKAYLSEFIATLLFVFAGVGSAVAFAKLTSDGALDPAGLVAIAIAHAFALFVGVSIAANISGGHLNPAVTLGLAIGGNITLITGFFYWIAQCLGSIVACLLL---------VFVTNGKSVPTHGVSAGLGAVEGVVMEIVVTFALVYTVYATAADPK 165          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP_ANTMA (Probable aquaporin TIP-type OS=Antirrhinum majus GN=DIP PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.200e-15
Identity = 56/165 (33.94%), Postives = 86/165 (52.12%), Query Frame = 1
Query:  175 GELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKG----DGLGAEIIGTFVLVYTVF-SATDAK 648
            G+  S +  +A +AEF+AT LF++  V + +  +K  S+      G+  +A A    +F  V   A +SGGH+NPAVT GL +   +++   +FY + QCLG+     ++K          +  G +V  HG   G     G+  EII TF LVYTV+ +A D K
Sbjct:   10 GDSFSVASIKAYVAEFIATLLFVFAGVGSAIAYNKLTSDAALDPAGLVAVAVAHAFALFVGVSMAANVSGGHLNPAVTLGLAVGGNITILTGLFYWIAQCLGSTVACLLLK---------FVTNGLSVPTHGVAAGMDAIQGVVMEIIITFALVYTVYATAADPK 165          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP2_BOVIN (Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.568e-15
Identity = 56/157 (35.67%), Postives = 83/157 (52.87%), Query Frame = 1
Query:  178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 648
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGA+ GA ++   E +    R     N + +  T G  +  E+  T  LV  +F++TD +
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFASTDER 152          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: TIP22_ORYSJ (Probable aquaporin TIP2-2 OS=Oryza sativa subsp. japonica GN=TIP2-2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 57/154 (37.01%), Postives = 84/154 (54.55%), Query Frame = 1
Query:  202 RAGIAEFMATFLFLYITVLTVMGVSK--SNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEG--SKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVF-SATDAK 648
            +A +AEF++T +F++  V + +  +K          G+  +A   G  +F  V   A ISGGH+NPAVTFGL L  ++++   VFY + Q LGAI GA +V+   G  +  +   G GA          +G+  EII TF LVYTV+ +A D K
Sbjct:   20 KAYVAEFISTLVFVFAGVGSAIAYTKLTGGAPLDPAGLVAVAVCHGFGLFVAVAIGANISGGHVNPAVTFGLALGGQITILTGVFYWIAQLLGAIVGAVLVQFCTGVATPTHGLSGVGA---------FEGVVMEIIVTFGLVYTVYATAADPK 164          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: MIP_RANPI (Lens fiber major intrinsic protein OS=Rana pipiens PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 53/157 (33.76%), Postives = 78/157 (49.68%), Query Frame = 1
Query:  178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 648
            E +S+SF+RA  AEF  T  +++      +G S          +  IA AFG ++  +V     +SG HINPAVTF  L+  ++SL RA+FY+  Q LGA+ GA V+ G   +     L    N +  G + G     EI  T   V  +F+  D +
Sbjct:    3 EFRSFSFWRAVFAEFFGTMFYVFFG----LGASLK-WAAGPANVLVIALAFGLVLATMVQSIGHVSGAHINPAVTFAFLIGSQMSLFRAIFYIAAQLLGAVAGAAVLYGVTPAAIRGNL--ALNTLHPGVSLGQATTVEIFLTLQFVLCIFATYDER 152          
BLAST of CF417510 vs. ExPASy Swiss-Prot
Match: AQP2_SHEEP (Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 2.674e-15
Identity = 56/157 (35.67%), Postives = 82/157 (52.23%), Query Frame = 1
Query:  178 ELKSWSFYRAGIAEFMATFLFLYITVLTVMGVSKSNTKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLLLARKLSLTRAVFYMVMQCLGAICGAGVVKGFEGSKNYERLGGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAK 648
            EL+S +F RA +AEF+AT LF++  + + +     N   +   +  IA AFG  I  LV     +SG HINPAVT   L+   +S  RAVFY+  Q LGA+ GA ++   E +    R     N + +  T G  +  E+  T  LV  +F +TD +
Sbjct:    3 ELRSIAFSRAVLAEFLATLLFVFFGLGSAL-----NWPQALPSVLQIAMAFGLAIGTLVQALGHVSGAHINPAVTVACLVGCHVSFLRAVFYVAAQLLGAVAGAALL--HEITPPAIRGDLAVNALNNNSTAGQAVTVELFLTLQLVLCIFPSTDKR 152          
The following BLAST results are available for this feature:
BLAST of CF417510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
AQP_ANOGA4.873e-1734.84Aquaporin AQPAn.G OS=Anopheles gambiae GN=AGAP0088... [more]
TIP21_ARATH6.365e-1738.16Aquaporin TIP2-1 OS=Arabidopsis thaliana GN=TIP2-1... [more]
MIP_CHICK4.125e-1638.46Lens fiber major intrinsic protein OS=Gallus gallu... [more]
AQP_AEDAE4.125e-1634.44Aquaporin AQPAe.a OS=Aedes aegypti GN=AAEL003512 P... [more]
TIP23_ARATH9.190e-1635.15Aquaporin TIP2-3 OS=Arabidopsis thaliana GN=TIP2-3... [more]
TIP_ANTMA1.200e-1533.94Probable aquaporin TIP-type OS=Antirrhinum majus G... [more]
AQP2_BOVIN1.568e-1535.67Aquaporin-2 OS=Bos taurus GN=AQP2 PE=2 SV=2[more]
TIP22_ORYSJ2.674e-1537.01Probable aquaporin TIP2-2 OS=Oryza sativa subsp. j... [more]
MIP_RANPI2.674e-1533.76Lens fiber major intrinsic protein OS=Rana pipiens... [more]
AQP2_SHEEP2.674e-1535.67Aquaporin-2 OS=Ovis aries GN=AQP2 PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-440 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_A11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417510 ID=CF417510; Name=CF417510; organism=Citrus sinensis; type=EST; length=725bp
ATCTTCTTTGAGAGAATAAGAGAGCGAGAGAGAGGTTCATCATCGTCAAT
GGAAGGCAAAGAAGAGGATGTTAAGCTAGGAGCTAACAAGTTCTCAGAGA
GGCAACCCATTGGGACATCAGCTCAATCAGACAAAGACTACAAGGAGCCA
CCACCAGCACCTTTGTTTGAGCCTGGTGAGCTCAAGTCATGGTCTTTTTA
CAGAGCTGGTATTGCAGAGTTCATGGCTACCTTCTTGTTCCTCTACATCA
CTGTCTTGACTGTCATGGGTGTCTCTAAGTCTAACACCAAGTGCTCCACT
GTCGGTATCCAAGGAATTGCTTGGGCCTTTGGTGGCATGATCTTTGCCCT
TGTTTACTGCACTGCTGGTATCTCAGGAGGACACATCAACCCAGCAGTGA
CCTTCGGTCTGCTGCTAGCGAGGAAGCTTTCCCTGACAAGAGCTGTCTTC
TACATGGTCATGCAGTGCCTTGGTGCCATCTGTGGTGCTGGTGTTGTCAA
GGGATTCGAAGGTTCAAAGAACTACGAGAGGTTGGGTGGTGGAGCCAATG
TTGTTGCTCACGGCTACACCAAGGGTGATGGTCTTGGTGCTGAGATTATT
GGAACCTTTGTTCTTGTTTACACTGTCTTCTCTGCCACTGATGCCAAAAN
AACGCCAGAGATTCTCATGTCCCTATTTTGGNCCCCCTCCCCATTGGATT
TGCTGTTTTCTTGGTCCACCTGGCC
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