CF417517

Overview
NameCF417517
Unique NameCF417517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5159 contig Csv1_Contig5159:475..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 170.629 bits (431), Expect = 1.811e-45
Identity = 85/158 (53.80%), Postives = 117/158 (74.05%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIK-LNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLS 473
            D++I +G  G +YK +L+DGS + IK+L   S + ++EF AEM+T+G +K+RNLVPLLGYC   +ERLL+YEYM  G L D LH   +   K L+W +R KIAIG+A+GLA+LHH+C P IIHR++ S  +LL   FE ++SDFG+ARLM+ +DTHLS
Sbjct:  306 DNIIATGRTGTMYKGRLEDGSLLMIKRL-QDSQRSEKEFDAEMKTLGSVKNRNLVPLLGYCVANKERLLMYEYMANGYLYDQLHPADEESFKPLDWPSRLKIAIGTAKGLAWLHHSCNPRIIHRNISSKCILLTAEFEPKISDFGLARLMNPIDTHLS 462          

HSP 2 Score: 33.4982 bits (75), Expect = 1.811e-45
Identity = 14/36 (38.89%), Postives = 20/36 (55.56%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPT 604
            GYV PEY ++   + KGDVY +G     +  G+  T
Sbjct:  473 GYVAPEYSRTMVATPKGDVYSFGVVLLELVTGQKAT 508          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: PSYR1_ARATH (Tyrosine-sulfated glycopeptide receptor 1 OS=Arabidopsis thaliana GN=PSYR1 PE=2 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 1.758e-42
Identity = 77/163 (47.24%), Postives = 110/163 (67.48%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            ++IG GGFG VYKA L +G+ +A+KKL    G  ++EF AE+E + + KH NLV L GYC     R+L+Y +M  GSL+  LH   +   +L+W  R  I  G++ GLA++H  C PHI+HRD+KSSN+LLD NF+A V+DFG++RL+    TH++ + L GT
Sbjct:  807 NIIGCGGFGLVYKATLDNGTKLAVKKLTGDYGMMEKEFKAEVEVLSRAKHENLVALQGYCVHDSARILIYSFMENGSLDYWLHENPEGPAQLDWPKRLNIMRGASSGLAYMHQICEPHIVHRDIKSSNILLDGNFKAYVADFGLSRLILPYRTHVT-TELVGT 968          

HSP 2 Score: 39.2762 bits (90), Expect = 1.758e-42
Identity = 15/37 (40.54%), Postives = 23/37 (62.16%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD 607
            GY+PPEY Q++  + +GDVY +G     +  GK P +
Sbjct:  970 GYIPPEYGQAWVATLRGDVYSFGVVMLELLTGKRPME 1006          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1743_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g74360 OS=Arabidopsis thaliana GN=At1g74360 PE=1 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 2.985e-42
Identity = 81/169 (47.93%), Postives = 113/169 (66.86%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETI-----GKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            + ++G GG+G VY+  L DG  VA+KKL     + ++EF AEME +     G   H NLV L G+C  G E++LV+EYM  GSLE+++ ++ K    L W  R  IA   ARGL FLHH C P I+HRD+K+SNVLLD++  ARV+DFG+ARL++  D+H+S + +AGT
Sbjct:  817 ERVVGRGGYGTVYRGVLPDGREVAVKKLQREGTEAEKEFRAEMEVLSANAFGDWAHPNLVRLYGWCLDGSEKILVHEYMGGGSLEELITDKTK----LQWKKRIDIATDVARGLVFLHHECYPSIVHRDVKASNVLLDKHGNARVTDFGLARLLNVGDSHVS-TVIAGT 980          

HSP 2 Score: 40.0466 bits (92), Expect = 2.985e-42
Identity = 17/40 (42.50%), Postives = 24/40 (60.00%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSAD 616
            GYV PEY Q++  +T+GDVY YG     +A G+   D  +
Sbjct:  982 GYVAPEYGQTWQATTRGDVYSYGVLTMELATGRRAVDGGE 1021          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1677_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g67720 OS=Arabidopsis thaliana GN=At1g67720 PE=2 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 1.463e-41
Identity = 78/161 (48.45%), Postives = 102/161 (63.35%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +G G FG VY  ++KDG  VA+K     S   +R+F  E+  + +I HRNLVPL+GYC+  + R+LVYEYM  GSL D LH        L+W  R +IA  +A+GL +LH  C P IIHRD+KSSN+LLD N  A+VSDFG++R      TH+S S   GT
Sbjct:  612 VGRGSFGSVYYGRMKDGKEVAVKITADPSSHLNRQFVTEVALLSRIHHRNLVPLIGYCEEADRRILVYEYMHNGSLGDHLHGSSDYK-PLDWLTRLQIAQDAAKGLEYLHTGCNPSIIHRDVKSSNILLDINMRAKVSDFGLSRQTEEDLTHVS-SVAKGT 770          

HSP 2 Score: 41.5874 bits (96), Expect = 1.463e-41
Identity = 18/42 (42.86%), Postives = 24/42 (57.14%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADFG 622
            GY+ PEYY S   + K DVY +G     + +GK P  + DFG
Sbjct:  772 GYLDPEYYASQQLTEKSDVYSFGVVLFELLSGKKPVSAEDFG 813          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1154_ARATH (Probable serine/threonine-protein kinase At1g01540 OS=Arabidopsis thaliana GN=At1g01540 PE=1 SV=2)

HSP 1 Score: 155.221 bits (391), Expect = 2.503e-41
Identity = 70/161 (43.48%), Postives = 110/161 (68.32%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTL 485
            +++IG GG+G VY+  L DG+ VA+K L++  GQ ++EF  E+E IG+++H+NLV LLGYC  G  R+LVY+++  G+LE  +H        L W  R  I +G A+GLA+LH    P ++HRD+KSSN+LLD  + A+VSDFG+A+L+ +  ++++   +
Sbjct:  157 ENVIGEGGYGIVYRGILTDGTKVAVKNLLNNRGQAEKEFKVEVEVIGRVRHKNLVRLLGYCVEGAYRMLVYDFVDNGNLEQWIHGDVGDVSPLTWDIRMNIILGMAKGLAYLHEGLEPKVVHRDIKSSNILLDRQWNAKVSDFGLAKLLGSESSYVTTRVM 317          

HSP 2 Score: 35.039 bits (79), Expect = 2.503e-41
Identity = 18/48 (37.50%), Postives = 25/48 (52.08%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD-SADFGDNNLV 637
            GYV PEY  +   + K D+Y +G     +  G+ P D S   G+ NLV
Sbjct:  321 GYVAPEYACTGMLNEKSDIYSFGILIMEIITGRNPVDYSRPQGETNLV 368          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: FEI2_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 2 OS=Arabidopsis thaliana GN=FEI2 PE=1 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 3.843e-41
Identity = 87/200 (43.50%), Postives = 127/200 (63.50%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLPNTIKALXVRRKAMFTXXXXXXXXXXTGKXP 602
            + +IG GGFG VYK  + DG+  A+K+++ ++   DR F  E+E +G IKHR LV L GYC     +LL+Y+Y+  GSL++ LH   K G +L+W +R  I IG+A+GLA+LHH+C P IIHRD+KSSN+LLD N EARVSDFG+A+L+   ++H++ + +AGT     P  +++     K              +GK P
Sbjct:  307 EHIIGCGGFGTVYKLSMDDGNVFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALH---KRGEQLDWDSRVNIIIGAAKGLAYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKLP 502          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: ERL2_ARATH (LRR receptor-like serine/threonine-protein kinase ERL2 OS=Arabidopsis thaliana GN=ERL2 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 5.494e-41
Identity = 81/159 (50.94%), Postives = 105/159 (66.04%), Query Frame = 3
Query:    9 LIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTL 485
            +IG G    VYK   K    +AIK++ +      REF  E+ETIG I+HRN+V L GY       LL Y+YM  GSL D+LH   K  +KL+W  R KIA+G+A+GLA+LHH+C P IIHRD+KSSN+LLD NFEAR+SDFG+A+ + A  T+ S   L
Sbjct:  656 IIGYGASSTVYKCTSKTSRPIAIKRIYNQYPSNFREFETELETIGSIRHRNIVSLHGYALSPFGNLLFYDYMENGSLWDLLHGPGKK-VKLDWETRLKIAVGAAQGLAYLHHDCTPRIIHRDIKSSNILLDGNFEARLSDFGIAKSIPATKTYASTYVL 813          

HSP 2 Score: 32.7278 bits (73), Expect = 5.494e-41
Identity = 14/49 (28.57%), Postives = 23/49 (46.94%), Query Frame = 2
Query:  464 TFECQYASRHTGYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDS 610
            T+   Y     GY+ PEY ++   + K D+Y +G     +  GK   D+
Sbjct:  806 TYASTYVLGTIGYIDPEYARTSRLNEKSDIYSFGIVLLELLTGKKAVDN 854          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 1.591e-40
Identity = 79/159 (49.69%), Postives = 109/159 (68.55%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQG-DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVS 479
            +++G GGFG VYK +L DG+ VA+K+L     QG + +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+   L  + +    L+W  R++IA+GSARGLA+LH +C P IIHRD+K++N+LLDE FEA V DFG+A+LM   DTH++ +
Sbjct:  293 NILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTA 451          

HSP 2 Score: 28.4906 bits (62), Expect = 1.591e-40
Identity = 13/45 (28.89%), Postives = 22/45 (48.89%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADFGDNN 631
            G++ PEY  +   S K DV+ YG     +  G+   D A   +++
Sbjct:  457 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDD 501          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: FEI1_ARATH (LRR receptor-like serine/threonine-protein kinase FEI 1 OS=Arabidopsis thaliana GN=FEI1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 2.491e-40
Identity = 85/200 (42.50%), Postives = 126/200 (63.00%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLPNTIKALXVRRKAMFTXXXXXXXXXXTGKXP 602
            + +IG GGFG VYK  + DG   A+K+++ ++   DR F  E+E +G IKHR LV L GYC     +LL+Y+Y+  GSL++ LH +   G +L+W +R  I IG+A+GL++LHH+C P IIHRD+KSSN+LLD N EARVSDFG+A+L+   ++H++ + +AGT     P  +++     K              +GK P
Sbjct:  309 EHIIGCGGFGTVYKLAMDDGKVFALKRILKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLLYDYLPGGSLDEALHER---GEQLDWDSRVNIIIGAAKGLSYLHHDCSPRIIHRDIKSSNILLDGNLEARVSDFGLAKLLEDEESHIT-TIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLVLEVLSGKRP 504          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK33_ARATH (Putative cysteine-rich receptor-like protein kinase 33 OS=Arabidopsis thaliana GN=CRK33 PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.699e-40
Identity = 75/163 (46.01%), Postives = 110/163 (67.48%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +++G GGFG+V+K  L+DGS +A+K+L   S QG +EF  E   + K++HRNLV +LG+C  GEE++LVYE++   SL+  L    K G +L+WA R KI +G+ARG+ +LHH+    IIHRD+K+SN+LLD   E +V+DFGMAR+     +      + GT
Sbjct:  325 NMLGQGGFGEVFKGVLQDGSEIAVKRLSKESAQGVQEFQNETSLVAKLQHRNLVGVLGFCMEGEEKILVYEFVPNKSLDQFLFEPTKKG-QLDWAKRYKIIVGTARGILYLHHDSPLKIIHRDLKASNILLDAEMEPKVADFGMARIFRVDQSRADTRRVVGT 486          

HSP 2 Score: 31.187 bits (69), Expect = 2.699e-40
Identity = 17/49 (34.69%), Postives = 23/49 (46.94%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD--SADFGDNNLV 637
            GY+ PEY      S K DVY +G     + +GK  ++    D    NLV
Sbjct:  488 GYISPEYLMHGQFSVKSDVYSFGVLVLEIISGKRNSNFHETDESGKNLV 536          
The following BLAST results are available for this feature:
BLAST of CF417517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y5838_ARATH1.811e-4553.80Probably inactive leucine-rich repeat receptor-lik... [more]
PSYR1_ARATH1.758e-4247.24Tyrosine-sulfated glycopeptide receptor 1 OS=Arabi... [more]
Y1743_ARATH2.985e-4247.93Probable LRR receptor-like serine/threonine-protei... [more]
Y1677_ARATH1.463e-4148.45Probable LRR receptor-like serine/threonine-protei... [more]
Y1154_ARATH2.503e-4143.48Probable serine/threonine-protein kinase At1g01540... [more]
FEI2_ARATH3.843e-4143.50LRR receptor-like serine/threonine-protein kinase ... [more]
ERL2_ARATH5.494e-4150.94LRR receptor-like serine/threonine-protein kinase ... [more]
BAK1_ARATH1.591e-4049.69BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
FEI1_ARATH2.491e-4042.50LRR receptor-like serine/threonine-protein kinase ... [more]
CRK33_ARATH2.699e-4046.01Putative cysteine-rich receptor-like protein kinas... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-447 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417517 ID=CF417517; Name=CF417517; organism=Citrus sinensis; type=EST; length=639bp
ATGACAGTCTTATAGGCTCTGGTGGTTTTGGTGATGTATACAAGGCTAAA
CTGAAAGATGGAAGTACTGTAGCTATCAAGAAACTGATACATATCAGCGG
ACAAGGTGATCGGGAATTCACAGCTGAAATGGAAACAATAGGGAAAATCA
AGCACCGGAATCTTGTACCCCTTTTGGGTTATTGCAAGGTAGGAGAAGAG
AGGCTCTTGGTATACGAGTACATGAGGTATGGAAGCTTAGAAGATGTATT
ACACAACCAAAAGAAAGTGGGGATCAAGCTGAACTGGGCAGCACGGAGGA
AGATTGCAATTGGGTCAGCAAGAGGTTTGGCTTTTCTTCATCACAATTGC
ATCCCACACATTATCCACCGGGATATGAAATCGAGCAATGTTCTGCTAGA
CGAAAACTTTGAGGCCAGAGTCTCAGATTTTGGAATGGCAAGACTAATGA
GTGCGATGGATACACATTTGAGTGTCAGTACGCTAGCAGGCACACCGGCT
ATGTCCCTCCCGAATACTATCAAAGCTTTANATGTTCGACGAAAGGCGAT
GTTTACNGTTATGGNGGTAGTTTTGCTCGAGTTGCTAACGGGAAAANGCC
CACAGATTCAGCAGATTTCGGTGACAATAACCTAGTTGG
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