CF417517

Overview
NameCF417517
Unique NameCF417517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y2393_ARATH (Probable receptor-like protein kinase At2g39360 OS=Arabidopsis thaliana GN=At2g39360 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.521e-34
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 3
Query:    9 LIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVS 479
            +IG GGFG VYK  L+D + VA+K+    S QG  EF  E+E + + +HR+LV L+GYC    E ++VYEYM  G+L+D L++      +L+W  R +I +G+ARGL +LH      IIHRD+KS+N+LLD+NF A+V+DFG+++    +D TH+S +
Sbjct:  492 VIGVGGFGKVYKGVLRDKTEVAVKRGAPQSRQGLAEFKTEVEMLTQFRHRHLVSLIGYCDENSEMIIVYEYMEKGTLKDHLYDLDDKP-RLSWRQRLEICVGAARGLHYLHTGSTRAIIHRDVKSANILLDDNFMAKVADFGLSKTGPDLDQTHVSTA 648          

HSP 2 Score: 27.335 bits (59), Expect = 2.521e-34
Identity = 13/37 (35.14%), Postives = 17/37 (45.95%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD 607
            GY+ PEY      + K DVY +G     V  G+   D
Sbjct:  654 GYLDPEYLTRQQLTEKSDVYSFGVVMLEVVCGRPVID 690          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK30_ARATH (Putative cysteine-rich receptor-like protein kinase 30 OS=Arabidopsis thaliana GN=CRK30 PE=2 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.526e-34
Identity = 73/164 (44.51%), Postives = 102/164 (62.20%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLH---NQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            IG GGFG+VYK  L +G+ VA+K+L   S QG+ EF  E+  + K++HRNLV LLG+   GEE++LV+E++   SL+  L    N  K G +L+W  R  I  G  RGL +LH +    IIHRD+K+SN+LLD +   +++DFGMAR      T  S   + GT
Sbjct:  352 IGQGGFGEVYKGTLSNGTEVAVKRLSRTSDQGELEFKNEVLLVAKLQHRNLVRLLGFALQGEEKILVFEFVPNKSLDYFLFGSTNPTKKG-QLDWTRRYNIIGGITRGLLYLHQDSRLTIIHRDIKASNILLDADMNPKIADFGMARNFRDHQTEDSTGRVVGT 514          

HSP 2 Score: 33.8834 bits (76), Expect = 2.526e-34
Identity = 14/33 (42.42%), Postives = 19/33 (57.58%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+PPEY      STK DVY +G     + +G+
Sbjct:  516 GYMPPEYVAHGQFSTKSDVYSFGVLILEIVSGR 548          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: SRK6_BRAOE (Putative serine/threonine-protein kinase receptor OS=Brassica oleracea var. acephala GN=SRK6 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 3.282e-34
Identity = 72/161 (44.72%), Postives = 101/161 (62.73%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +G GGFG VYK +L DG  +A+K+L   S QG  EF  E+  I +++H NLV +LG C  G+E++L+YEY+   SL+  L  + +   KLNW  R  I  G ARGL +LH +    IIHRD+K SN+LLD+N   ++SDFGMAR+    +T  +   + GT
Sbjct:  534 LGQGGFGIVYKGRLLDGKEIAVKRLSKTSVQGTDEFMNEVTLIARLQHINLVQVLGCCIEGDEKMLIYEYLENLSLDSYLFGKTRRS-KLNWNERFDITNGVARGLLYLHQDSRFRIIHRDLKVSNILLDKNMIPKISDFGMARIFERDETEANTMKVVGT 693          

HSP 2 Score: 27.335 bits (59), Expect = 3.282e-34
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+ PEY      S K DV+ +G     + +GK
Sbjct:  695 GYMSPEYAMYGIFSEKSDVFSFGVIVLEIVSGK 727          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.312e-34
Identity = 79/184 (42.93%), Postives = 112/184 (60.87%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYK----------AKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVSTLAGTPAMSLPNTI 521
            DSL+G GGFG V+K          +K   G  VA+KKL     QG +E+  E+  +G++ H NLV L+GYC  GE RLLVYE+M  GSLE+  H  ++    L WA R K+AIG+A+GL FL H+    +I+RD K++N+LLD  F +++SDFG+A+     D TH+S   + GT   + P  +
Sbjct:   86 DSLLGEGGFGYVFKGWIDGTTLTASKPGSGIVVAVKKLKTEGYQGHKEWLTEVNYLGQLSHPNLVKLVGYCVEGENRLLVYEFMPKGSLEN--HLFRRGAQPLTWAIRMKVAIGAAKGLTFL-HDAKSQVIYRDFKAANILLDAEFNSKLSDFGLAKAGPTGDKTHVSTQVM-GTHGYAAPEYV 265          

HSP 2 Score: 30.8018 bits (68), Expect = 3.312e-34
Identity = 13/42 (30.95%), Postives = 20/42 (47.62%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADFG 622
            GY  PEY  +   + K DVY +G     + +G+   D +  G
Sbjct:  258 GYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVG 299          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 144.821 bits (364), Expect = 3.484e-34
Identity = 75/168 (44.64%), Postives = 108/168 (64.29%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVG-IKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            IG GGFG VYK +L +G  +A+K+L   S QG+REF  E+  I  ++H NLV L G C  G + +LVYEY+    L   L  + +   +KL+W+ R+KI +G A+GL FLH      I+HRD+K+SNVLLD++  A++SDFG+A+L    +TH+S + +AGT     P
Sbjct:  684 IGEGGFGSVYKGELSEGKLIAVKQLSAKSRQGNREFVNEIGMISALQHPNLVKLYGCCVEGNQLILVYEYLENNCLSRALFGKDESSRLKLDWSTRKKIFLGIAKGLTFLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHIS-TRIAGTIGYMAP 850          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y2899_ARATH (Probable leucine-rich repeat receptor-like protein kinase At2g28990 OS=Arabidopsis thaliana GN=At2g28990 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.273e-34
Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTP 497
            D  +G GGFG VY   +     VA+K L   S QG + F AE+E + ++ H NLV L+GYC  GE   L+YEYM  G L+  L   K  G  L+W +R KI + +A GL +LH  C+P ++HRD+K++N+LLD++ +A+++DFG++R     +     + +AGTP
Sbjct:  580 DKALGEGGFGVVYHGFVNVIEQVAVKLLSQSSSQGYKHFKAEVELLMRVHHINLVSLVGYCDEGEHLALIYEYMPNGDLKQHLSG-KHGGFVLSWESRLKIVLDAALGLEYLHTGCVPPMVHRDIKTTNILLDQHLQAKLADFGLSRSFPIGNEKNVSTVVAGTP 743          

HSP 2 Score: 31.187 bits (69), Expect = 4.273e-34
Identity = 11/23 (47.83%), Postives = 16/23 (69.57%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYG 565
            GY+ PEYYQ+   + K D+Y +G
Sbjct:  744 GYLDPEYYQTNWLTEKSDIYSFG 766          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK26_ARATH (Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana GN=CRK26 PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 4.288e-34
Identity = 71/148 (47.97%), Postives = 98/148 (66.22%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 446
            ++ +G GGFG VYK  L DG  +A+K+L   + QG+ EF  E   + K++HRNLV LLGY   G ERLLVYE++ + SL+  + +  + G +L W  R KI  G ARGL +LH +    IIHRD+K+SN+LLDE    +++DFGMARL
Sbjct:  347 ENKLGEGGFGAVYKGVLSDGQKIAVKRLSKNAQQGETEFKNEFLLVAKLQHRNLVKLLGYSIEGTERLLVYEFLPHTSLDKFIFDPIQ-GNELEWEIRYKIIGGVARGLLYLHQDSRLRIIHRDLKASNILLDEEMTPKIADFGMARL 493          

HSP 2 Score: 28.1054 bits (61), Expect = 4.288e-34
Identity = 13/33 (39.39%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+ PEY      S K DVY +G     + +GK
Sbjct:  512 GYMAPEYVMHGQFSFKTDVYSFGVLVLEIISGK 544          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: SRF8_ARATH (Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsis thaliana GN=SRF8 PE=2 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.581e-34
Identity = 70/173 (40.46%), Postives = 107/173 (61.85%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIH--ISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVST-LAGTPAMSLP 512
            +++IG G  G VY+A+  +G  +AIKK+ +  +S Q +  F   +  + +++H N+VPL GYC    +RLLVYEY+  G+L+D LH      + L W AR K+A+G+A+ L +LH  C+P I+HR+ KS+N+LLDE     +SD G+A L    +T   VST + G+   S P
Sbjct:  398 ENIIGEGSLGRVYRAEFPNGKIMAIKKIDNAALSLQEEDNFLEAVSNMSRLRHPNIVPLAGYCTEHGQRLLVYEYVGNGNLDDTLHTNDDRSMNLTWNARVKVALGTAKALEYLHEVCLPSIVHRNFKSANILLDEELNPHLSDSGLAAL--TPNTERQVSTQVVGSFGYSAP 568          

HSP 2 Score: 30.8018 bits (68), Expect = 5.581e-34
Identity = 14/39 (35.90%), Postives = 20/39 (51.28%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSA 613
            GY  PE+  S   + K DVY +G     +  G+ P DS+
Sbjct:  564 GYSAPEFALSGIYTVKSDVYTFGVVMLELLTGRKPLDSS 602          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y5181_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g51810 OS=Arabidopsis thaliana GN=At1g51810 PE=2 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.942e-34
Identity = 70/163 (42.94%), Postives = 114/163 (69.94%), Query Frame = 3
Query:    9 LIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAM-DTHLSVSTLAGT 494
            ++G GGFG VY   +     VA+K L H S QG ++F AE+E + ++ H+NLV L+GYC+ G++  L+YEYM  G L++ + + K+ G  LNW  R KIA+ +A+GL +LH+ C P ++HRD+K++N+LL+E+F+ +++DFG++R      +TH+S + +AGT
Sbjct:  582 ILGKGGFGIVYYGSVNGTEQVAVKMLSHSSAQGYKQFKAEVELLLRVHHKNLVGLVGYCEEGDKLALIYEYMANGDLDEHM-SGKRGGSILNWGTRLKIALEAAQGLEYLHNGCKPLMVHRDVKTTNILLNEHFDTKLADFGLSRSFPIEGETHVS-TVVAGT 742          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: RKF3_ARATH (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana GN=RKF3 PE=1 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 5.942e-34
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKV-----GEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            ++IG GG+G+V+K  L DG+ VA K+  + S  GD  F  E+E I  I+H NL+ L GYC       G +R++V + +  GSL D L    +   +L W  R++IA+G ARGLA+LH+   P IIHRD+K+SN+LLDE FEA+V+DFG+A+      TH+S + +AGT     P
Sbjct:  287 NIIGRGGYGNVFKGALPDGTQVAFKRFKNCSAGGDANFAHEVEVIASIRHVNLLALRGYCTATTPYEGHQRIIVCDLVSNGSLHDHLFGDLEA--QLAWPLRQRIALGMARGLAYLHYGAQPSIIHRDIKASNILLDERFEAKVADFGLAKFNPEGMTHMS-TRVAGTMGYVAP 457          
The following BLAST results are available for this feature:
BLAST of CF417517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
Y2393_ARATH2.521e-3445.57Probable receptor-like protein kinase At2g39360 OS... [more]
CRK30_ARATH2.526e-3444.51Putative cysteine-rich receptor-like protein kinas... [more]
SRK6_BRAOE3.282e-3444.72Putative serine/threonine-protein kinase receptor ... [more]
APK2B_ARATH3.312e-3442.93Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
Y1765_ARATH3.484e-3444.64Probable LRR receptor-like serine/threonine-protei... [more]
Y2899_ARATH4.273e-3441.21Probable leucine-rich repeat receptor-like protein... [more]
CRK26_ARATH4.288e-3447.97Cysteine-rich receptor-like protein kinase 26 OS=A... [more]
SRF8_ARATH5.581e-3440.46Protein STRUBBELIG-RECEPTOR FAMILY 8 OS=Arabidopsi... [more]
Y5181_ARATH5.942e-3442.94Probable LRR receptor-like serine/threonine-protei... [more]
RKF3_ARATH5.942e-3444.25Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-447 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417517 ID=CF417517; Name=CF417517; organism=Citrus sinensis; type=EST; length=639bp
ATGACAGTCTTATAGGCTCTGGTGGTTTTGGTGATGTATACAAGGCTAAA
CTGAAAGATGGAAGTACTGTAGCTATCAAGAAACTGATACATATCAGCGG
ACAAGGTGATCGGGAATTCACAGCTGAAATGGAAACAATAGGGAAAATCA
AGCACCGGAATCTTGTACCCCTTTTGGGTTATTGCAAGGTAGGAGAAGAG
AGGCTCTTGGTATACGAGTACATGAGGTATGGAAGCTTAGAAGATGTATT
ACACAACCAAAAGAAAGTGGGGATCAAGCTGAACTGGGCAGCACGGAGGA
AGATTGCAATTGGGTCAGCAAGAGGTTTGGCTTTTCTTCATCACAATTGC
ATCCCACACATTATCCACCGGGATATGAAATCGAGCAATGTTCTGCTAGA
CGAAAACTTTGAGGCCAGAGTCTCAGATTTTGGAATGGCAAGACTAATGA
GTGCGATGGATACACATTTGAGTGTCAGTACGCTAGCAGGCACACCGGCT
ATGTCCCTCCCGAATACTATCAAAGCTTTANATGTTCGACGAAAGGCGAT
GTTTACNGTTATGGNGGTAGTTTTGCTCGAGTTGCTAACGGGAAAANGCC
CACAGATTCAGCAGATTTCGGTGACAATAACCTAGTTGG
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