CF417517

Overview
NameCF417517
Unique NameCF417517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5159 contig Csv1_Contig5159:475..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK24_ARATH (Cysteine-rich receptor-like protein kinase 24 OS=Arabidopsis thaliana GN=CRK24 PE=2 SV=2)

HSP 1 Score: 136.346 bits (342), Expect = 8.143e-36
Identity = 68/161 (42.24%), Postives = 101/161 (62.73%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +G GGFG+VYK    +G+ VA+K+L   SGQG+ EF  E+  + K++HRNLV LLGY   G+E++LVYE++   SL+  L +  K G +L+W  R  I  G  RG+ +LH +    IIHRD+K+ N+LLD +   ++ DFG+AR      T  + + + GT
Sbjct:  318 LGHGGFGEVYKGTFPNGTEVAVKRLSKTSGQGEEEFKNEVFLVAKLQHRNLVKLLGYAVKGDEKILVYEFLPNKSLDHFLFDPVKKG-QLDWTRRYNIINGITRGIVYLHQDSRLTIIHRDLKAGNILLDADMNPKIVDFGVARNFRVDQTEATTARVVGT 477          

HSP 2 Score: 35.4242 bits (80), Expect = 8.143e-36
Identity = 19/49 (38.78%), Postives = 26/49 (53.06%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPT--DSADFGDNNLV 637
            GY+PPEY  +   STK DVY +G     +  GK  +  +  D   +NLV
Sbjct:  479 GYMPPEYVTNGQFSTKSDVYSFGVLILEIIGGKKNSSINETDGSISNLV 527          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK15_ARATH (Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana GN=CRK15 PE=2 SV=2)

HSP 1 Score: 143.28 bits (360), Expect = 1.061e-35
Identity = 74/161 (45.96%), Postives = 104/161 (64.60%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            IG GGFG+VYK    +G+ VA+K+L   SGQGD EF  E+  + K++HRNLV LLG+   G ER+LVYEYM   SL+  L +  K   +L+W  R K+  G ARG+ +LH +    IIHRD+K+SN+LLD +   +++DFG+AR+     T  + S + GT
Sbjct:  343 IGQGGFGEVYKGTFSNGTEVAVKRLSKSSGQGDTEFKNEVVVVAKLQHRNLVRLLGFSIGGGERILVYEYMPNKSLDYFLFDPAKQN-QLDWTRRYKVIGGIARGILYLHQDSRLTIIHRDLKASNILLDADMNPKLADFGLARIFGMDQTQENTSRIVGT 502          

HSP 2 Score: 28.1054 bits (61), Expect = 1.061e-35
Identity = 13/33 (39.39%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+ PEY      S K DVY +G     + +GK
Sbjct:  504 GYMAPEYAIHGQFSVKSDVYSFGVLVLEIISGK 536          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: ERECT_ARATH (LRR receptor-like serine/threonine-protein kinase ERECTA OS=Arabidopsis thaliana GN=ERECTA PE=1 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 1.375e-35
Identity = 74/155 (47.74%), Postives = 100/155 (64.52%), Query Frame = 3
Query:    9 LIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLS 473
            +IG G    VYK  LK+   VAIK+L   + Q  ++F  E+E +  IKHRNLV L  Y       LL Y+Y+  GSL D+LH   K    L+W  R KIA G+A+GLA+LHH+C P IIHRD+KSSN+LLD++ EAR++DFG+A+ +    +H S
Sbjct:  653 IIGHGASSTVYKCVLKNCKPVAIKRLYSHNPQSMKQFETELEMLSSIKHRNLVSLQAYSLSHLGSLLFYDYLENGSLWDLLHGPTKKKT-LDWDTRLKIAYGAAQGLAYLHHDCSPRIIHRDVKSSNILLDKDLEARLTDFGIAKSLCVSKSHTS 806          

HSP 2 Score: 30.0314 bits (66), Expect = 1.375e-35
Identity = 13/38 (34.21%), Postives = 18/38 (47.37%), Query Frame = 2
Query:  452 CDGYTFECQYASRHTGYVPPEYYQSFXCSTKGDVYXYG 565
            C   +    Y     GY+ PEY ++   + K DVY YG
Sbjct:  799 CVSKSHTSTYVMGTIGYIDPEYARTSRLTEKSDVYSYG 836          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK36_ARATH (Cysteine-rich receptor-like protein kinase 36 OS=Arabidopsis thaliana GN=CRK36 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.381e-35
Identity = 73/174 (41.95%), Postives = 107/174 (61.49%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLPNTIK 524
            ++ +G GGFG VYK  L  G  +A+K+L   SGQG+ EF  E+  + +++HRNLV LLG+C  G E +LVYE++   SL+  + ++ K  + L W  R +I  G ARGL +LH +    IIHRD+K+SN+LLD     +V+DFGMARL +  +T    S + GT     P  ++
Sbjct:  343 ENKLGQGGFGSVYKGILPSGQEIAVKRLAGGSGQGELEFKNEVLLLTRLQHRNLVKLLGFCNEGNEEILVYEHVPNSSLDHFIFDEDKRWL-LTWDVRYRIIEGVARGLLYLHEDSQLRIIHRDLKASNILLDAEMNPKVADFGMARLFNMDETRGETSRVVGTYGYMAPEYVR 515          

HSP 2 Score: 28.4906 bits (62), Expect = 1.381e-35
Identity = 12/33 (36.36%), Postives = 18/33 (54.55%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+ PEY +    S K DVY +G     + +G+
Sbjct:  507 GYMAPEYVRHGQFSAKSDVYSFGVMLLEMISGE 539          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1684_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana GN=At1g06840 PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 1.791e-35
Identity = 77/168 (45.83%), Postives = 109/168 (64.88%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD------THLSVSTLAGTP 497
            IG GG+G VYK  L  G+ VAIK+    S QG++EF  E+E + ++ HRNLV LLG+C    E++LVYEYM  G+L D +    K+   L++A R +IA+GSA+G+ +LH    P I HRD+K+SN+LLD  F A+V+DFG++RL    D       H+S + + GTP
Sbjct:  631 IGQGGYGKVYKGTLGSGTVVAIKRAQEGSLQGEKEFLTEIELLSRLHHRNLVSLLGFCDEEGEQMLVYEYMENGTLRDNI--SVKLKEPLDFAMRLRIALGSAKGILYLHTEANPPIFHRDIKASNILLDSRFTAKVADFGLSRLAPVPDMEGISPQHVS-TVVKGTP 795          

HSP 2 Score: 28.1054 bits (61), Expect = 1.791e-35
Identity = 12/35 (34.29%), Postives = 17/35 (48.57%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXP 601
            GY+ PEY+ +   + K DVY  G     +  G  P
Sbjct:  796 GYLDPEYFLTHQLTDKSDVYSLGVVLLELFTGMQP 830          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK23_ARATH (Putative cysteine-rich receptor-like protein kinase 23 OS=Arabidopsis thaliana GN=CRK23 PE=2 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 1.794e-35
Identity = 74/167 (44.31%), Postives = 104/167 (62.28%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            +G GGFG+VYK     G  VA+K+L   SGQG+REF  E+  + K++HRNLV LLGYC  GEE++LVYE++   SL+  L +   +  +L+W  R KI  G ARG+ +LH +    IIHRD+K+ N+LLD +   +V+DFGMAR+     T  +   + GT     P
Sbjct:  514 LGQGGFGEVYKGTFPSGVQVAVKRLSKTSGQGEREFENEVVVVAKLQHRNLVRLLGYCLEGEEKILVYEFVHNKSLDYFLFD-TTMKRQLDWTRRYKIIGGIARGILYLHQDSRLTIIHRDLKAGNILLDADMNPKVADFGMARIFGMDQTEANTRRVVGTYGYMAP 679          

HSP 2 Score: 26.1794 bits (56), Expect = 1.794e-35
Identity = 12/32 (37.50%), Postives = 16/32 (50.00%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANG 592
            GY+ PEY      S K DVY +G     + +G
Sbjct:  675 GYMAPEYAMYGQFSMKSDVYSFGVLVFEIISG 706          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK11_ARATH (Cysteine-rich receptor-like protein kinase 11 OS=Arabidopsis thaliana GN=CRK11 PE=2 SV=2)

HSP 1 Score: 144.436 bits (363), Expect = 1.799e-35
Identity = 74/167 (44.31%), Postives = 108/167 (64.67%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            +G GGFG VYK KL +G+ VA+K+L   SGQG REF  E   + K++HRNLV LLG+C   EE++L+YE++   SL+  L + +K   +L+W  R KI  G ARG+ +LH +    IIHRD+K+SN+LLD +   +++DFG+A +     T  + + +AGT A   P
Sbjct:  356 LGEGGFGAVYKGKLSNGTDVAVKRLSKKSGQGTREFRNEAVLVTKLQHRNLVRLLGFCLEREEQILIYEFVHNKSLDYFLFDPEKQS-QLDWTRRYKIIGGIARGILYLHQDSRLKIIHRDLKASNILLDADMNPKIADFGLATIFGVEQTQGNTNRIAGTYAYMSP 521          

HSP 2 Score: 26.1794 bits (56), Expect = 1.799e-35
Identity = 11/32 (34.38%), Postives = 16/32 (50.00%), Query Frame = 2
Query:  500 YVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            Y+ PEY      S K D+Y +G     + +GK
Sbjct:  518 YMSPEYAMHGQYSMKSDIYSFGVLVLEIISGK 549          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y1105_ARATH (Probable receptor-like protein kinase At1g11050 OS=Arabidopsis thaliana GN=At1g11050 PE=2 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 1.800e-35
Identity = 78/174 (44.83%), Postives = 110/174 (63.22%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGE----ERLLVYEYMRYGSLEDVLHNQ-KKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            + IG GGFG VYK  L DGS +A+KK+I    QGD EF  E+E I  +KHRNLVPL G   V +    +R LVY+YM  G+L+D L  + +   + L+W  R+ I +  A+GLA+LH+   P I HRD+K +N+LLD +  ARV+DFG+A+     ++HL+ + +AGT     P
Sbjct:  299 NFIGRGGFGFVYKGVLPDGSVIAVKKVIESEFQGDAEFRNEVEIISNLKHRNLVPLRGCSMVDDDSESQRYLVYDYMSNGNLDDHLFPRGETTKMPLSWPQRKSIILDVAKGLAYLHYGVKPAIYHRDIKGTNILLDVDMRARVADFGLAKQSREGESHLT-TRVAGTHGYLAP 471          

HSP 2 Score: 28.1054 bits (61), Expect = 1.800e-35
Identity = 14/45 (31.11%), Postives = 20/45 (44.44%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADFGDNN 631
            GY+ PEY      + K DVY +G     +  G+   D +  G  N
Sbjct:  467 GYLAPEYALYGQLTEKSDVYSFGVVILEIMCGRKALDLSTSGSPN 511          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 1.801e-35
Identity = 72/159 (45.28%), Postives = 105/159 (66.04%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQG-DREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVS 479
            +++G G FG +YK +L D + VA+K+L     +G + +F  E+E I    HRNL+ L G+C    ERLLVY YM  GS+   L  + +    L+W  R+ IA+GSARGLA+LH +C   IIH D+K++N+LLDE FEA V DFG+A+LM+  D+H++ +
Sbjct:  279 NVLGKGRFGILYKGRLADDTLVAVKRLNEERTKGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPEGNPALDWPKRKHIALGSARGLAYLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTA 437          

HSP 2 Score: 28.4906 bits (62), Expect = 1.801e-35
Identity = 13/45 (28.89%), Postives = 22/45 (48.89%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADFGDNN 631
            G++ PEY  +   S K DV+ YG     +  G+   D A   +++
Sbjct:  443 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDD 487          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y2242_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g24230 OS=Arabidopsis thaliana GN=At2g24230 PE=2 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 1.847e-35
Identity = 76/174 (43.68%), Postives = 108/174 (62.07%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHN-----------------------QKKVGIK---LNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARL 446
            D+L+  G FG VY+  L  G  VA+K L+H S   D+E   E+E +G+IKH NLVPL GYC  G++R+ +YEYM  G+L+++LH+                        + +G +     W  R KIA+G+AR LAFLHH C P IIHRD+K+S+V LD+N+E R+SDFG+A++
Sbjct:  549 DTLLADGKFGPVYRGFLPGGIHVAVKVLVHGSTLSDQEAARELEFLGRIKHPNLVPLTGYCIAGDQRIAIYEYMENGNLQNLLHDLPFGVQTTDDWTTDTWEEETDNGTQNIGTEGPVATWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDQNWEPRLSDFGLAKV 722          
The following BLAST results are available for this feature:
BLAST of CF417517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CRK24_ARATH8.143e-3642.24Cysteine-rich receptor-like protein kinase 24 OS=A... [more]
CRK15_ARATH1.061e-3545.96Cysteine-rich receptor-like protein kinase 15 OS=A... [more]
ERECT_ARATH1.375e-3547.74LRR receptor-like serine/threonine-protein kinase ... [more]
CRK36_ARATH1.381e-3541.95Cysteine-rich receptor-like protein kinase 36 OS=A... [more]
Y1684_ARATH1.791e-3545.83Probable LRR receptor-like serine/threonine-protei... [more]
CRK23_ARATH1.794e-3544.31Putative cysteine-rich receptor-like protein kinas... [more]
CRK11_ARATH1.799e-3544.31Cysteine-rich receptor-like protein kinase 11 OS=A... [more]
Y1105_ARATH1.800e-3544.83Probable receptor-like protein kinase At1g11050 OS... [more]
SERK5_ARATH1.801e-3545.28Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y2242_ARATH1.847e-3543.68Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-447 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417517 ID=CF417517; Name=CF417517; organism=Citrus sinensis; type=EST; length=639bp
ATGACAGTCTTATAGGCTCTGGTGGTTTTGGTGATGTATACAAGGCTAAA
CTGAAAGATGGAAGTACTGTAGCTATCAAGAAACTGATACATATCAGCGG
ACAAGGTGATCGGGAATTCACAGCTGAAATGGAAACAATAGGGAAAATCA
AGCACCGGAATCTTGTACCCCTTTTGGGTTATTGCAAGGTAGGAGAAGAG
AGGCTCTTGGTATACGAGTACATGAGGTATGGAAGCTTAGAAGATGTATT
ACACAACCAAAAGAAAGTGGGGATCAAGCTGAACTGGGCAGCACGGAGGA
AGATTGCAATTGGGTCAGCAAGAGGTTTGGCTTTTCTTCATCACAATTGC
ATCCCACACATTATCCACCGGGATATGAAATCGAGCAATGTTCTGCTAGA
CGAAAACTTTGAGGCCAGAGTCTCAGATTTTGGAATGGCAAGACTAATGA
GTGCGATGGATACACATTTGAGTGTCAGTACGCTAGCAGGCACACCGGCT
ATGTCCCTCCCGAATACTATCAAAGCTTTANATGTTCGACGAAAGGCGAT
GTTTACNGTTATGGNGGTAGTTTTGCTCGAGTTGCTAACGGGAAAANGCC
CACAGATTCAGCAGATTTCGGTGACAATAACCTAGTTGG
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