CF417517

Overview
NameCF417517
Unique NameCF417517
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length639
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5159 contig Csv1_Contig5159:475..1114. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 2.342e-35
Identity = 71/165 (43.03%), Postives = 113/165 (68.48%), Query Frame = 3
Query:    9 LIGSGGFGDVYKAKLKDGST--VAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQ-KKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLM---SAMDTHLSVSTL 485
            ++G+GGFG V++  L   S+  +A+KK+   S QG REF AE+E++G+++H+NLV L G+CK   + LL+Y+Y+  GSL+ +L+++ ++ G+ L+W AR KIA G A GL +LH      +IHRD+K SNVL++++   R+ DFG+ARL    S  +T + V T+
Sbjct:  366 IVGTGGFGTVFRGNLSSPSSDQIAVKKITPNSMQGVREFIAEIESLGRLRHKNLVNLQGWCKQKNDLLLIYDYIPNGSLDSLLYSRPRQSGVVLSWNARFKIAKGIASGLLYLHEEWEKVVIHRDIKPSNVLIEDDMNPRLGDFGLARLYERGSQSNTTVVVGTI 530          

HSP 2 Score: 33.8834 bits (76), Expect = 2.342e-35
Identity = 14/41 (34.15%), Postives = 23/41 (56.10%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTDSADF 619
            GY+ PE  ++   S+  DV+ +G     + +G+ PTDS  F
Sbjct:  531 GYMAPELARNGKSSSASDVFAFGVLLLEIVSGRRPTDSGTF 571          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK13_ARATH (Cysteine-rich receptor-like protein kinase 13 OS=Arabidopsis thaliana GN=CRK13 PE=2 SV=1)

HSP 1 Score: 139.813 bits (351), Expect = 2.343e-35
Identity = 70/167 (41.92%), Postives = 105/167 (62.87%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            +G GG G V+K +L DG  +A+K+L   + Q  +EF  E+  + K++HRNLV LLG+   GEE+++VYEY+   SL+ +L +  K G +L+W  R KI  G+ARG+ +LH +  P IIHRD+K+ N+LLD +   +V+DFG AR+     +    +  AGTP    P
Sbjct:  364 LGHGGSGHVFKGRLPDGKEIAVKRLSEKTEQSKKEFKNEVVLVAKLQHRNLVRLLGFSVKGEEKIIVYEYLPNRSLDYILFDPTKQG-ELDWKKRYKIIGGTARGILYLHQDSQPTIIHRDLKAGNILLDAHMNPKVADFGTARIFGMDQSVAITANAAGTPGYMAP 529          

HSP 2 Score: 30.4166 bits (67), Expect = 2.343e-35
Identity = 15/36 (41.67%), Postives = 18/36 (50.00%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPT 604
            GY+ PEY +    S K DVY YG     +  GK  T
Sbjct:  525 GYMAPEYMELGEFSMKSDVYSYGVLVLEIICGKRNT 560          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y5597_ARATH (Probable receptor-like protein kinase At5g59700 OS=Arabidopsis thaliana GN=At5g59700 PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 3.044e-35
Identity = 74/157 (47.13%), Postives = 104/157 (66.24%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVS 479
            IG GGFG VYK +L DG+ VA+K+    S QG  EF  E+E + + +HR+LV L+GYC    E +LVYEYM  G+L+  L+      + L+W  R +I IGSARGL +LH      +IHRD+KS+N+LLDEN  A+V+DFG+++    +D TH+S +
Sbjct:  488 IGVGGFGKVYKGELHDGTKVAVKRANPKSQQGLAEFRTEIEMLSQFRHRHLVSLIGYCDENNEMILVYEYMENGTLKSHLYGSGL--LSLSWKQRLEICIGSARGLHYLHTGDAKPVIHRDVKSANILLDENLMAKVADFGLSKTGPEIDQTHVSTA 642          

HSP 2 Score: 27.7202 bits (60), Expect = 3.044e-35
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYG 565
            GY+ PEY++    + K DVY +G
Sbjct:  648 GYLDPEYFRRQQLTEKSDVYSFG 670          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK8_ARATH (Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana GN=CRK8 PE=2 SV=2)

HSP 1 Score: 142.124 bits (357), Expect = 3.051e-35
Identity = 75/167 (44.91%), Postives = 104/167 (62.28%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLP 512
            IG GGFG+VYK    +G  VA+K+L   S QG+ EF  E+  + K++HRNLV LLG+   GEER+LVYEYM   SL+ +L +  K   +L+W  R  I  G ARG+ +LH +    IIHRD+K+SN+LLD +   +++DFGMAR+     T  + S + GT     P
Sbjct:  359 IGRGGFGEVYKGTFSNGKEVAVKRLSKNSRQGEAEFKTEVVVVAKLQHRNLVRLLGFSLQGEERILVYEYMPNKSLDCLLFDPTK-QTQLDWMQRYNIIGGIARGILYLHQDSRLTIIHRDLKASNILLDADINPKIADFGMARIFGLDQTQDNTSRIVGTYGYMAP 524          

HSP 2 Score: 27.7202 bits (60), Expect = 3.051e-35
Identity = 12/33 (36.36%), Postives = 17/33 (51.52%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+ PEY      S K DVY +G     + +G+
Sbjct:  520 GYMAPEYAMHGQFSMKSDVYSFGVLVLEIISGR 552          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y5977_ARATH (Probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Arabidopsis thaliana GN=At5g49770 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 3.151e-35
Identity = 80/197 (40.61%), Postives = 116/197 (58.88%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGTPAMSLPNTIKALXVRRKAMFTXXXXXXXXXXTGKXP 602
            +G GG+G VYK  L +G  +AIK+    S QG  EF  E+E + ++ H+N+V LLG+C   +E++LVYEY+  GSL D L    K G+KL+W  R KIA+GS +GLA+LH    P IIHRD+KS+N+LLDE+  A+V+DFG+++L+   +     + + GT     P       +  K+             TGK P
Sbjct:  640 VGGGGYGQVYKGTLPNGQVIAIKRAQQGSMQGAFEFKTEIELLSRVHHKNVVKLLGFCFDQKEQMLVYEYIPNGSLRDGLSG--KNGVKLDWTRRLKIALGSGKGLAYLHELADPPIIHRDVKSNNILLDEHLTAKVADFGLSKLVGDPEKAHVTTQVKGTMGYLDPEYYMTNQLTEKSDVYGFGVVMLELLTGKSP 834          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: THE1_ARATH (Receptor-like protein kinase THESEUS 1 OS=Arabidopsis thaliana GN=THE1 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.963e-35
Identity = 75/159 (47.17%), Postives = 105/159 (66.04%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMD-THLSVS 479
            SL+G GGFG VYK  L+DG+ VA+K+    S QG  EF  E+E + K++HR+LV L+GYC    E +LVYEYM  G L   L+        L+W  R +I IG+ARGL +LH      IIHRD+K++N+LLDEN  A+V+DFG+++   ++D TH+S +
Sbjct:  514 SLLGVGGFGRVYKGTLEDGTKVAVKRGNPRSEQGMAEFRTEIEMLSKLRHRHLVSLIGYCDERSEMILVYEYMANGPLRSHLYGADLP--PLSWKQRLEICIGAARGLHYLHTGASQSIIHRDVKTTNILLDENLVAKVADFGLSKTGPSLDQTHVSTA 670          

HSP 2 Score: 27.7202 bits (60), Expect = 3.963e-35
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYG 565
            GY+ PEY++    + K DVY +G
Sbjct:  676 GYLDPEYFRRQQLTEKSDVYSFG 698          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: CRK16_ARATH (Putative cysteine-rich receptor-like protein kinase 16 OS=Arabidopsis thaliana GN=CRK16 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 3.975e-35
Identity = 69/161 (42.86%), Postives = 103/161 (63.98%), Query Frame = 3
Query:   12 IGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +G GGFG+V+K    +G+ VA+K+L  ISGQG+ EF  E+  + K++HRNLV LLG+   GEE++LVYEYM   SL+  L + ++ G +L+W  R  I  G  RG+ +LH +    IIHRD+K+ N+LLD +   +++DFG+AR      T  +   + GT
Sbjct:  341 LGHGGFGEVFKGTFPNGTEVAVKRLSKISGQGEEEFKNEVLLVAKLQHRNLVRLLGFSVEGEEKILVYEYMPNKSLDYFLFDHRRRG-QLDWRTRYNIIRGVTRGILYLHQDSRLTIIHRDLKAGNILLDVDMNPKIADFGVARNFRVDQTEATTGRVVGT 500          

HSP 2 Score: 31.5722 bits (70), Expect = 3.975e-35
Identity = 14/33 (42.42%), Postives = 18/33 (54.55%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGK 595
            GY+PPEY  +   S K DVY +G     +  GK
Sbjct:  502 GYMPPEYVANGQFSMKSDVYSFGVLILEIIVGK 534          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 3.979e-35
Identity = 74/157 (47.13%), Postives = 103/157 (65.61%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHI-SGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLS 473
            +++G GGFG VYK  L D + VA+K+L    S  GD  F  E+E I    HRNL+ L+G+C    ERLLVY +M+  SL   L   K     L+W  R++IA+G+ARG  +LH +C P IIHRD+K++NVLLDE+FEA V DFG+A+L+    T+++
Sbjct:  294 NVLGQGGFGKVYKGVLPDNTKVAVKRLTDFESPGGDAAFQREVEMISVAVHRNLLRLIGFCTTQTERLLVYPFMQNLSLAHRLREIKAGDPVLDWETRKRIALGAARGFEYLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVT 450          

HSP 2 Score: 26.5646 bits (57), Expect = 3.979e-35
Identity = 11/37 (29.73%), Postives = 18/37 (48.65%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD 607
            G++ PEY  +   S + DV+ YG     +  G+   D
Sbjct:  458 GHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAID 494          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: Y2706_ARATH (Probable receptor-like protein kinase At2g47060 OS=Arabidopsis thaliana GN=At2g47060 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 4.006e-35
Identity = 77/169 (45.56%), Postives = 103/169 (60.95%), Query Frame = 3
Query:    3 DSLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKV-----GIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMARLMSAMDTHLSVSTLAGT 494
            +SLIG G +G VY   L +    AIKKL   + Q D EF A++  + ++KH N V LLGYC  G  R+L YE+   GSL D+LH +K V     G  L+W  R KIA+G+ARGL +LH    PHIIHRD+KSSNVLL E+  A+++DF ++     M   L  + + GT
Sbjct:   76 NSLIGEGSYGRVYYGVLNNDLPSAIKKL-DSNKQPDNEFLAQVSMVSRLKHDNFVQLLGYCVDGNSRILSYEFANNGSLHDILHGRKGVKGAQPGPVLSWYQRVKIAVGAARGLEYLHEKANPHIIHRDIKSSNVLLFEDDVAKIADFDLSNQAPDMAARLHSTRVLGT 243          

HSP 2 Score: 30.4166 bits (67), Expect = 4.006e-35
Identity = 13/37 (35.14%), Postives = 18/37 (48.65%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYGGSFARVANGKXPTD 607
            GY  PEY  +   + K DVY +G     +  G+ P D
Sbjct:  245 GYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVD 281          
BLAST of CF417517 vs. ExPASy Swiss-Prot
Match: ANX2_ARATH (Receptor-like protein kinase ANXUR2 OS=Arabidopsis thaliana GN=ANX2 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.162e-35
Identity = 71/146 (48.63%), Postives = 102/146 (69.86%), Query Frame = 3
Query:    6 SLIGSGGFGDVYKAKLKDGSTVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCKVGEERLLVYEYMRYGSLEDVLHNQKKVGIKLNWAARRKIAIGSARGLAFLHHNCIPHIIHRDMKSSNVLLDENFEARVSDFGMAR 443
            ++IG GGFG VYK  +  G+ VAIKK    S QG  EF  E+E + +++H++LV L+GYC  G E  L+Y+YM  G+L + L+N K+   +L W  R +IAIG+ARGL +LH      IIHRD+K++N+LLDEN+ A+VSDFG+++
Sbjct:  525 NVIGVGGFGKVYKGVIDGGTKVAIKKSNPNSEQGLNEFETEIELLSRLRHKHLVSLIGYCDEGGEMCLIYDYMSLGTLREHLYNTKRP--QLTWKRRLEIAIGAARGLHYLHTGAKYTIIHRDVKTTNILLDENWVAKVSDFGLSK 668          

HSP 2 Score: 27.7202 bits (60), Expect = 5.162e-35
Identity = 10/23 (43.48%), Postives = 15/23 (65.22%), Query Frame = 2
Query:  497 GYVPPEYYQSFXCSTKGDVYXYG 565
            GY+ PEY++    + K DVY +G
Sbjct:  687 GYLDPEYFRRQQLTEKSDVYSFG 709          
The following BLAST results are available for this feature:
BLAST of CF417517 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
LRKA2_ARATH2.342e-3543.03Lectin-domain containing receptor kinase A4.2 OS=A... [more]
CRK13_ARATH2.343e-3541.92Cysteine-rich receptor-like protein kinase 13 OS=A... [more]
Y5597_ARATH3.044e-3547.13Probable receptor-like protein kinase At5g59700 OS... [more]
CRK8_ARATH3.051e-3544.91Cysteine-rich receptor-like protein kinase 8 OS=Ar... [more]
Y5977_ARATH3.151e-3540.61Probable leucine-rich repeat receptor-like protein... [more]
THE1_ARATH3.963e-3547.17Receptor-like protein kinase THESEUS 1 OS=Arabidop... [more]
CRK16_ARATH3.975e-3542.86Putative cysteine-rich receptor-like protein kinas... [more]
Y5129_ARATH3.979e-3547.13Probable LRR receptor-like serine/threonine-protei... [more]
Y2706_ARATH4.006e-3545.56Probable receptor-like protein kinase At2g47060 OS... [more]
ANX2_ARATH5.162e-3548.63Receptor-like protein kinase ANXUR2 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-447 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417517 ID=CF417517; Name=CF417517; organism=Citrus sinensis; type=EST; length=639bp
ATGACAGTCTTATAGGCTCTGGTGGTTTTGGTGATGTATACAAGGCTAAA
CTGAAAGATGGAAGTACTGTAGCTATCAAGAAACTGATACATATCAGCGG
ACAAGGTGATCGGGAATTCACAGCTGAAATGGAAACAATAGGGAAAATCA
AGCACCGGAATCTTGTACCCCTTTTGGGTTATTGCAAGGTAGGAGAAGAG
AGGCTCTTGGTATACGAGTACATGAGGTATGGAAGCTTAGAAGATGTATT
ACACAACCAAAAGAAAGTGGGGATCAAGCTGAACTGGGCAGCACGGAGGA
AGATTGCAATTGGGTCAGCAAGAGGTTTGGCTTTTCTTCATCACAATTGC
ATCCCACACATTATCCACCGGGATATGAAATCGAGCAATGTTCTGCTAGA
CGAAAACTTTGAGGCCAGAGTCTCAGATTTTGGAATGGCAAGACTAATGA
GTGCGATGGATACACATTTGAGTGTCAGTACGCTAGCAGGCACACCGGCT
ATGTCCCTCCCGAATACTATCAAAGCTTTANATGTTCGACGAAAGGCGAT
GTTTACNGTTATGGNGGTAGTTTTGCTCGAGTTGCTAACGGGAAAANGCC
CACAGATTCAGCAGATTTCGGTGACAATAACCTAGTTGG
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