CF417522

Overview
NameCF417522
Unique NameCF417522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10591 contig Csv1_Contig10591:225..951. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP7 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 7424) GN=atpG PE=3 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 6.562e-54
Identity = 114/202 (56.44%), Postives = 147/202 (72.77%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR      ++ E   +P+A EA TI+D++ SLF+SE VD+VEL+YT+F+SL+ S PV+ TLLPL+ +G         +D  +DE FRL TK GK  VER+ V    +SF   + FEQDPVQILD+LLPLYLN+Q+LRALQES ASELA+RM+AMS+A+DNA EL K LS+ YN+ RQA IT EILE+VAGA+AL
Sbjct:  122 RKAVQYFERRNAPIQTKYTELSQIPSASEASTISDELLSLFLSETVDRVELIYTRFLSLISSKPVVQTLLPLTTKG---------LDTPDDEIFRLVTKGGKFQVEREKVSASVSSFPQDMIFEQDPVQILDSLLPLYLNNQLLRALQESAASELAARMTAMSSASDNAGELIKTLSLSYNKARQAAITQEILEVVAGANAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ANAVT (ATP synthase gamma chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=atpG PE=3 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.462e-53
Identity = 116/203 (57.14%), Postives = 149/203 (73.40%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR   P+D    G   +PTA+EA  IAD++ SLF+SE+VD++EL+YT+FVSLV S PVI TLLPL  +G         ++AA+DE FRLTT+ G+  VER  V T+       + FEQDPVQILD+LLPLYL++Q+LRALQES ASELA+RM+AMSNA+DNA EL K+LS+ YN+ RQA IT E+LE+V GA+AL
Sbjct:  122 RKAEQYFRRREQ-PIDASYTGLEQIPTAEEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQG---------LEAADDEIFRLTTRGGQFEVERQTVTTQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASDNAGELIKSLSLSYNKARQAAITQELLEVVGGAEAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP1 (ATP synthase gamma chain OS=Synechococcus sp. (strain PCC 6716) GN=atpG PE=3 SV=1)

HSP 1 Score: 206.068 bits (523), Expect = 1.616e-52
Identity = 113/203 (55.67%), Postives = 147/203 (72.41%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR Y P+D    G   +P+A EA  IA+++ SLF+SE VD+VEL+YTKFVSL+ S PV+ TLLPL P+G         ++AA+DE FRLTT+   L V R+ V +   +  P + FEQDPVQILDALLPLYL++Q+LRALQE+ ASELA+RM+AM+NA+DNA  L   L++ YN+ RQA IT EILE+VAGA+AL
Sbjct:  122 RKAAQYFQRRDY-PIDAVYSGLEQIPSASEAGQIANELLSLFLSETVDRVELIYTKFVSLISSKPVVQTLLPLDPQG---------LEAADDEIFRLTTRASHLEVNREKVTSNLPALPPDMIFEQDPVQILDALLPLYLSNQLLRALQEAAASELAARMTAMNNASDNAQTLIGTLTLSYNKARQAAITQEILEVVAGAEAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ANASP (ATP synthase gamma chain OS=Anabaena sp. (strain PCC 7120) GN=atpG PE=3 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 2.111e-52
Identity = 114/203 (56.16%), Postives = 148/203 (72.91%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR   P+D    G   +PTA EA  IAD++ SLF+SE+VD++EL+YT+FVSLV S PVI TLLPL  +G         ++AA+DE FRLTT+ G+  VER  V ++       + FEQDPVQILD+LLPLYL++Q+LRALQES ASELA+RM+AMSNA++NA EL K+LS+ YN+ RQA IT E+LE+V GA+AL
Sbjct:  122 RKAEQYFRRREQ-PIDASYTGLEQIPTADEANKIADELLSLFLSEKVDRIELVYTRFVSLVSSRPVIQTLLPLDTQG---------LEAADDEIFRLTTRGGQFQVERQTVTSQARPLPRDMIFEQDPVQILDSLLPLYLSNQLLRALQESAASELAARMTAMSNASENAGELIKSLSLSYNKARQAAITQELLEVVGGAEAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CYAA5 (ATP synthase gamma chain OS=Cyanothece sp. (strain ATCC 51142) GN=atpG PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.702e-52
Identity = 109/202 (53.96%), Postives = 146/202 (72.28%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR      ++     +PTA EA TIAD++ SLF+SE VD+VEL+YT+FVSL+ S PV+ TL PL+ +G         ++  +DE FRL T+EGKL VER+ V    +SF   + FEQDPVQILDALLPLY+N+Q+LRALQE+ ASELA+RM+AMSNA+DNA +L   L++ YN+ RQA IT +++E+VAGA+AL
Sbjct:  122 RKATQYFSRREAPIESKYTGLNQIPTADEAATIADELLSLFLSETVDRVELIYTRFVSLISSRPVVQTLAPLTMQG---------LETEDDEIFRLITREGKLQVERETVTQTMSSFPQDMIFEQDPVQILDALLPLYINNQLLRALQEAAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQQLMEVVAGANAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CYAP8 (ATP synthase gamma chain OS=Cyanothece sp. (strain PCC 8801) GN=atpG PE=3 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 6.142e-52
Identity = 108/203 (53.20%), Postives = 150/203 (73.89%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR   P+++   G   +PTA EA +IAD++ SLF+SE VD+VEL+YT+FVSL+ S PV+ TLLPL+ +G         ++  +DE FRL T++GKL VER+ +  E +SF   + FEQDP+QILDALLPLY+N+Q+LR LQE+ ASELA+RM+AMSNA+DNA +L   L++ YN+ RQA IT +++E+VAGA+AL
Sbjct:  122 RKATQYFSRRQ-APIEKTYVGLNQIPTADEAGSIADELLSLFLSETVDRVELIYTRFVSLISSRPVVQTLLPLTVQG---------LEVEDDEVFRLITRDGKLRVERETIAQEVSSFPQDMIFEQDPIQILDALLPLYINNQLLRGLQEAAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQQLMEVVAGANAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_THEEB (ATP synthase gamma chain OS=Thermosynechococcus elongatus (strain BP-1) GN=atpG PE=1 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 5.199e-51
Identity = 111/203 (54.68%), Postives = 144/203 (70.94%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR Y P+D    G   +P+A EA  IA ++ SLF+SE VD+VEL+YTKFVSL+ S PV+ TLLPL P+G         ++ A+DE FRLTT+   L V R+ V +   +    + FEQDP+QILDALLPLYLN+Q+LRALQE+ ASELA+RM+AM+NA+DNA  L   L++ YN+ RQA IT EILE+VAGA+AL
Sbjct:  122 RKAAQYFQRRDY-PIDAVYSGLEQIPSASEAGQIASELLSLFLSETVDRVELIYTKFVSLISSKPVVQTLLPLDPQG---------LETADDEIFRLTTRGSHLEVNREKVTSTLPALPSDMIFEQDPLQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNAQALIGTLTLSYNKARQAAITQEILEVVAGAEAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNY3 (ATP synthase gamma chain OS=Synechocystis sp. (strain PCC 6803) GN=atpG PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.513e-50
Identity = 109/201 (54.23%), Postives = 139/201 (69.15%), Query Frame = 1
Query:    4 KGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            K   YF RR Y     +     +P A EA  IAD + +LFVSE VD+VEL+YT+FVSL+ S PV+ TL PLSP+G         ++A +DE FRL T+ GK  VER+ V     SF   + FEQDPVQIL+ALLPLY  +Q+LRALQES ASELA+RM+AMSNA+DNA +L   L++ YN+ RQA IT E+LE+VAGA++L
Sbjct:  123 KAKQYFGRRDYDVAASYANLEQIPNASEAAQIADSLVALFVSETVDRVELIYTRFVSLISSQPVVQTLFPLSPQG---------LEAPDDEIFRLITRGGKFQVEREKVEAPVESFPQDMIFEQDPVQILEALLPLYNTNQLLRALQESAASELAARMTAMSNASDNAGQLIGTLTLSYNKARQAAITQELLEVVAGANSL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNE7 (ATP synthase gamma chain OS=Synechococcus elongatus (strain PCC 7942) GN=atpG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 109/203 (53.69%), Postives = 147/203 (72.41%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR   P++    G   +PTA+EA  IAD++ SLF+S  VD+VEL+YTKF+SLV S+PV+ TLLPL P+G         + +++DE FRLTT+ G  TVER+ + +E A     + FEQDP QIL ALLPLYL++Q+LRALQE+ ASELA+RM+AM++A+DNA  L   L++VYN+ RQA IT E+LE+VAGA+AL
Sbjct:  122 RKAGQYFQRREQ-PIEATYSGLEQIPTAQEANDIADELLSLFLSGTVDRVELVYTKFLSLVASNPVVQTLLPLDPQG---------LASSDDEIFRLTTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAMNSASDNANALVGQLTLVYNKARQAAITQELLEVVAGAEAL 314          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_MICAN (ATP synthase gamma chain OS=Microcystis aeruginosa (strain NIES-843) GN=atpG PE=3 SV=1)

HSP 1 Score: 198.364 bits (503), Expect = 3.370e-50
Identity = 110/203 (54.19%), Postives = 145/203 (71.43%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPI-LQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            +K   YF RR      +F+    +PTA EA TI D++ SLF+SE VD+VEL+YT+F+SL+ + PVI TLLPL+ +G         +   +DE FRL TKEGK  V+R+ + ++ A   P  + FEQ+PVQILD+LLPLYLN+Q+LRALQES ASELA+RM+AMSNA++NA EL   LS  YN+ RQA IT E+LE+VAGA+AL
Sbjct:  122 RKAAQYFERRNAPIAAKFINLEQIPTADEAGTIGDELLSLFLSETVDRVELIYTRFISLISATPVIQTLLPLTTQG---------LAVQDDEIFRLVTKEGKFKVQREKMASQPAQVFPQDMIFEQNPVQILDSLLPLYLNNQLLRALQESAASELAARMTAMSNASENASELIGTLSRTYNKARQAAITQELLEVVAGANAL 315          
The following BLAST results are available for this feature:
BLAST of CF417522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_CYAP76.562e-5456.44ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_ANAVT1.462e-5357.14ATP synthase gamma chain OS=Anabaena variabilis (s... [more]
ATPG_SYNP11.616e-5255.67ATP synthase gamma chain OS=Synechococcus sp. (str... [more]
ATPG_ANASP2.111e-5256.16ATP synthase gamma chain OS=Anabaena sp. (strain P... [more]
ATPG_CYAA54.702e-5253.96ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_CYAP86.142e-5253.20ATP synthase gamma chain OS=Cyanothece sp. (strain... [more]
ATPG_THEEB5.199e-5154.68ATP synthase gamma chain OS=Thermosynechococcus el... [more]
ATPG_SYNY31.513e-5054.23ATP synthase gamma chain OS=Synechocystis sp. (str... [more]
ATPG_SYNE73.370e-5053.69ATP synthase gamma chain OS=Synechococcus elongatu... [more]
ATPG_MICAN3.370e-5054.19ATP synthase gamma chain OS=Microcystis aeruginosa... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-452 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417522 ID=CF417522; Name=CF417522; organism=Citrus sinensis; type=EST; length=727bp
AAGAAGGGTAATGCATATTTCCTTCGTAGGCCTTATATTCCTGTTGATAG
ATTTCTTGAGGGAGGTTCATTACCTACTGCTAAAGAAGCTCAGACTATAG
CAGATGATGTGTTTTCACTCTTTGTTAGTGAAGAAGTTGACAAGGTGGAG
CTTTTATACACAAAGTTTGTGTCTTTGGTTAAGTCTGATCCTGTGATTCA
CACTTTGCTTCCACTATCACCGAGGGGAGAGATTTGTGATGTGAATGGTG
TTTGCGTTGATGCTGCTGAGGATGAGTTCTTTAGATTGACAACTAAGGAA
GGAAAGTTAACTGTTGAGAGAGATGTTGTGAGAACTGAGACTGCTTCTTT
CTCACCCATTTTGCAATTTGAGCAGGACCCAGTTCAGATTCTTGATGCTC
TTTTGCCCCTCTATCTAAACAGCCAGATCTTGAGGGCTTTGCAGGAATCC
TTAGCCAGCGAGCTTGCTTCAAGAATGAGTGCCATGAGCAATGCAACTGA
TAATGCAATGGAGTTGAAGAAGAACTTGTCTATCGTCTACAACAGGCAGC
GCCAGGCCAAAATTACTGGAGAGATTTTGGAGATTGTTGCTGGTGCCGAT
GCTTTAGTGTAAAGAATTATGCGGGGCTTCTCACATCTTACTCAATTGTC
CATCTTTGTAGGCAATTTTACGACTGTTTCCCTTATTGATTCAAATATGC
TTGGTTTACCAGGAGTTATTCAGAATT
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