CF417522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP6 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=atpG PE=3 SV=2) HSP 1 Score: 197.593 bits (501), Expect = 5.748e-50 Identity = 109/203 (53.69%), Postives = 146/203 (71.92%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR P++ G +PTA+EA IAD + SLF+S VD+VEL+YTKF+SLV S+PV+ TLLPL P+G + +++DE FRLTT+ G TVER+ + +E A + FEQDP QIL ALLPLYL++Q+LRALQE+ ASELA+RM+AM++A+DNA L L++VYN+ RQA IT E+LE+VAGA+AL Sbjct: 122 RKAGQYFQRREQ-PIEATYSGLEQIPTAQEANDIADQLLSLFLSGTVDRVELVYTKFLSLVASNPVVQTLLPLDPQG---------LASSDDEIFRLTTRGGSFTVEREKLTSEVAPLPRDMIFEQDPAQILSALLPLYLSNQLLRALQEAAASELAARMTAMNSASDNANALVGQLTLVYNKARQAAITQELLEVVAGAEAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJA (ATP synthase gamma chain OS=Synechococcus sp. (strain JA-3-3Ab) GN=atpG PE=3 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.281e-49 Identity = 107/202 (52.97%), Postives = 139/202 (68.81%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR ++ +PTA EA I D++ S F+SE+VDKVEL+YT+FVSL+ S PV+ +LLPL P + A +DE F L + G+ TVER + ++ P + FEQDPVQILDALLPLYLN+Q+LRALQE+ ASELA+RM+AMSNA+DNA EL + L + YN+ RQA IT EILE+VAGA+AL Sbjct: 122 RKAVQYFQRRSAPIAKTYVNLSQIPTAAEAAQIGDELLSAFLSEKVDKVELIYTRFVSLISSRPVVQSLLPLDPTR---------LAARDDEIFNLLVRGGEFTVERSKIVAAVSAPPPDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMSNASDNATELIRTLGLAYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ACAM1 (ATP synthase gamma chain OS=Acaryochloris marina (strain MBIC 11017) GN=atpG PE=3 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.853e-49 Identity = 112/204 (54.90%), Postives = 144/204 (70.59%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPI-LQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR P++ G +PTA+EA IAD++ SL++SEEVD VEL+YT+F+SLV S PV+ TLLPL P V A EDE FRLTT+ G+ VER+ + T P + FEQ+P+QILDALLPLYLN+Q+LRALQES ASELA+RM+AM+NA+DNA EL L++ YN+ RQA IT E+LE+V GA+AL Sbjct: 122 RKAIQYFQRRDQ-PIEATYGGLEQIPTAQEASEIADELLSLYLSEEVDHVELIYTRFISLVNSRPVVQTLLPLDP--------DALVVAEEDEVFRLTTRGGQFQVERERMERGTPQEMPSDMIFEQNPIQILDALLPLYLNNQLLRALQESAASELAARMTAMNNASDNASELIGTLTLSYNKARQAAITQELLEVVGGAEAL 316
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNJB (ATP synthase gamma chain OS=Synechococcus sp. GN=atpG PE=3 SV=1) HSP 1 Score: 191.815 bits (486), Expect = 3.154e-48 Identity = 106/202 (52.48%), Postives = 137/202 (67.82%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR ++ +PTA EA I D + + F+SE+VDKVELLYT+FVSL+ S PV+ +LLPL P + +DE FRL + G+ TVER V ++ + FEQDPVQILDALLPLYLN+Q+LRALQE+ ASELA+RM+AM+NA+DNA EL + L + YN+ RQA IT EILE+VAGA+AL Sbjct: 122 RKAVQYFQRRSAPIAKTYVNLSQIPTAAEAAQIGDQLLAAFLSEKVDKVELLYTRFVSLISSRPVVQSLLPLDPSR---------LATQDDEIFRLLVRGGEFTVERSKVIAAVSAPPQDMIFEQDPVQILDALLPLYLNNQLLRALQEAAASELAARMTAMNNASDNASELIRTLGLAYNKARQAAITQEILEVVAGAEAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_TRIEI (ATP synthase gamma chain OS=Trichodesmium erythraeum (strain IMS101) GN=atpG PE=3 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.380e-48 Identity = 101/202 (50.00%), Postives = 138/202 (68.32%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF RR ++ + +PTA A +AD++ + F++ +D+VEL++T+F+SL+ S PVI TLLPL P+G ++ +DE FRLT+K G+ V R+ V SF + FEQDP+QILDALLPL+L +Q+LRA QES ASELASRM+AMSNA+DNA EL L++ YN+ RQA IT EILE+V GA+AL Sbjct: 122 RKAIQYFQRREVPILNTYDNPEKIPTADNASVVADEILAGFMAGSIDRVELIFTRFISLISSKPVIQTLLPLDPQG---------LEVKDDEIFRLTSKGGEFEVSRETVSAAVKSFPRDMIFEQDPIQILDALLPLFLTNQLLRAWQESSASELASRMTAMSNASDNASELAGTLTLAYNKARQAAITQEILEVVGGANAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNP2 (ATP synthase gamma chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=atpG PE=3 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.487e-47 Identity = 106/203 (52.22%), Postives = 138/203 (67.98%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEG-GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +K YF R PV + G +P+A EA IAD++ SLF+SEEVDK+EL+YT+FVSL+ S PV+ TLLPL P + +DE F L T+ GK VER+ V TE + FEQDP IL+ALLPLYL++Q+LRALQE ASELA+RM+AM+NA+DNA +L K L++ YN+ RQA IT E+ E+VAGA+AL Sbjct: 122 RKAVQYFQNRQ-APVAKTYAGLEQIPSAAEASDIADELLSLFLSEEVDKIELIYTRFVSLISSQPVVQTLLPLVPEA---------LTNPDDETFNLITRGGKFQVEREKVATEVKELPADMIFEQDPKDILNALLPLYLSNQLLRALQEGAASELAARMTAMNNASDNASDLMKTLTLSYNKARQAAITQELSEVVAGANAL 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PROM1 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL1A) GN=atpG PE=3 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 5.036e-46 Identity = 106/204 (51.96%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDR--FLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRT-ETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603 KK YF R + R F E +PT+++A +I +V + F+SE D+VE+++TKFVSLV +P I TLLPL P+G + +EDE FRLTTK+ +L +E+D T E + FEQ P Q+L+ALLPLYL +Q+LRALQES ASELASRM+AM+NA+DNA EL KNL+I YN+ RQA IT EILE+V GA A Sbjct: 122 KKAIGYFENRSSLYNIRATFKELEQVPTSEDAASITSEVLAEFLSESTDRVEVIFTKFVSLVSCNPTIQTLLPLDPQG---------IADSEDEIFRLTTKDSQLIIEKDAAPTNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PROMT (ATP synthase gamma chain OS=Prochlorococcus marinus (strain NATL2A) GN=atpG PE=3 SV=1) HSP 1 Score: 183.341 bits (464), Expect = 1.122e-45 Identity = 105/204 (51.47%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDR--FLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRT-ETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603 KK YF R + R F E +PT+++A +I +V + F+SE D+VE+++TKFVSLV +P I TLLPL P+G + +EDE FRLTTK+ +L +E+D + E + FEQ P Q+L+ALLPLYL +Q+LRALQES ASELASRM+AM+NA+DNA EL KNL+I YN+ RQA IT EILE+V GA A Sbjct: 122 KKAIGYFENRSSLYKIRATFKELEQVPTSEDAASITSEVLAEFLSESTDRVEVIFTKFVSLVSCNPTIQTLLPLDPQG---------IADSEDEIFRLTTKDSQLIIEKDAAPSNEEPKLPSDIVFEQSPDQLLNALLPLYLQNQLLRALQESAASELASRMTAMNNASDNAKELAKNLTIDYNKARQAAITQEILEVVGGASA 316
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_SYNS3 (ATP synthase gamma chain OS=Synechococcus sp. (strain CC9311) GN=atpG PE=3 SV=1) HSP 1 Score: 182.57 bits (462), Expect = 1.914e-45 Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPI-LQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603 +K +YF R Y F +PTA EA +IA ++F+ F+SE D+VE+++TKF++LV PV+ TLLPL P+G + A+DE FRLTTKEG+L+VE + P + FEQ P Q+L+ALLPLYL +Q+LR+LQES ASELASRM+AM+NA+DNA EL K L++ YN+ RQA IT EILE+V G+ A Sbjct: 122 RKAISYFTNRNYPIQATFTGLEQVPTADEAGSIASEIFAEFLSETSDRVEIIFTKFINLVSCKPVVQTLLPLDPQG---------IAEADDEIFRLTTKEGRLSVEAGSAPENSQPALPSDIVFEQSPDQLLNALLPLYLQNQLLRSLQESAASELASRMTAMNNASDNAKELAKTLTLDYNKARQAAITQEILEVVGGSAA 314
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PROM9 (ATP synthase gamma chain OS=Prochlorococcus marinus (strain MIT 9312) GN=atpG PE=3 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.264e-45 Identity = 102/202 (50.50%), Postives = 137/202 (67.82%), Query Frame = 1 Query: 1 KKGNAYFLRRP--YIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVER-DVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGA 597 KK YF R YI F E +PTAK+++ I +V + F+SE D+VE++YTKF++LV PV+ TLLPL P+G I D N DE FRLTTK+ KL VE+ ++ ++++ + FEQ P Q+LD+LLPLYL +Q+LRALQES ASELA RM+AM+NA+DNA EL L++ YN+ RQA IT EILE+V G+ Sbjct: 122 KKAIGYFQNRKDRYIIKTTFKELEQVPTAKDSEGITSEVLAEFLSENADRVEIIYTKFITLVSCAPVVQTLLPLDPQG-IADEN--------DEIFRLTTKDSKLLVEKSNIEKSDSEKLPSDIVFEQSPDQLLDSLLPLYLQNQVLRALQESAASELACRMTAMNNASDNAKELASTLNLTYNKARQAAITQEILEVVGGS 314 The following BLAST results are available for this feature:
BLAST of CF417522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417522 ID=CF417522; Name=CF417522; organism=Citrus sinensis; type=EST; length=727bpback to top |