CF417522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_MYCSJ (ATP synthase gamma chain OS=Mycobacterium sp. (strain JLS) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 41/83 (49.40%), Postives = 60/83 (72.29%), Query Frame = 1 Query: 358 ILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 + FE + DALLP Y++++I A+ E+ ASE ASR AM +A+DNA +L K+L+++ NR+RQ++IT EI EIV GA+AL Sbjct: 221 LFSFEPSAETLFDALLPRYVSTRIFAAMLEAAASESASRRRAMKSASDNADDLIKDLTLMANRERQSQITQEISEIVGGANAL 303
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_MARAV (ATP synthase gamma chain OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 60/199 (30.15%), Postives = 93/199 (46.73%), Query Frame = 1 Query: 1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGA 597 +KG ++F V G P+A + + FV ++D++ L+ +FV+ + P LLPL P G+ + ++ + D + +E D ILD L+P Y+ SQ+ + + E+LA E A+RM AM +ATDNA + L + YN+ RQA IT EI EIV+GA Sbjct: 120 QKGASFFRNYGGNVVAAVTHLGDSPSADQLIGSVKVMLDSFVEGKIDRLFLISNEFVNTMTQSPKALQLLPL-PEGD----------------------DEEIGHQWDYI------------YEPDSRPILDGLMPRYIESQVYQGVVENLACEQAARMIAMKSATDNAGSIIDELQLAYNKARQAAITQEISEIVSGA 283
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ALISL (ATP synthase gamma chain OS=Aliivibrio salmonicida (strain LFI1238) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 55/181 (30.39%), Postives = 89/181 (49.17%), Query Frame = 1 Query: 64 GSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 G P+ +E + + ++D++ ++ KF++ + +P I LLPL +EDE + RT + +E +P +LDALL Y+ SQ+ + + E+LA E +RM AM ATDNA ++ L +VYN+ RQ+ IT E+ EIV+GA A+ Sbjct: 141 GDKPSLEELIGTVGVMLKKYDEGQLDRLYVVNNKFINTMVQEPTIDQLLPLPK--------------SEDEAMK---------------RTHAWDYI----YEPEPKPLLDALLIRYVESQVYQGVVENLACEHVARMIAMKAATDNAGDIIDELQLVYNKARQSAITQELSEIVSGASAV 288
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ALHEH (ATP synthase gamma chain OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=atpG PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.892e-14 Identity = 50/162 (30.86%), Postives = 83/162 (51.23%), Query Frame = 1 Query: 121 FVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 + ++D++ L++ FV+ + + LLP+ P E ++ D + +AS ++LD +L Y+ SQ+ + + E++A E+A+RM AM +ATDNA E+ NL +VYN+ RQA IT E+ EIVAGA+A+ Sbjct: 161 YTEGKIDRLYLVHNDFVNTMSQEAATRRLLPVEP-----------------------VDEEEMLENWDYIYEPSAS------------ELLDDVLMRYIESQVYQGVVENVACEMAARMVAMKSATDNAGEIIDNLQLVYNKARQAAITQELSEIVAGANAV 287
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_VIBCM (ATP synthase gamma chain OS=Vibrio cholerae serotype O1 (strain M66-2) GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 133 EVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 E+D++ L++ +FV+ + P I LLPL P+ + D+ R + +E +P +LDALL ++ SQ+ + + E+LA E A+RM AM ATDNA L +L +VYN+ RQA IT E+ EIV GA A+ Sbjct: 164 ELDRLYLVFNQFVNTMVQKPKIDQLLPL-PKSD----------------------------SEDMQRDHMWDYI----YEPEPKPLLDALLLRFIESQVYQGVVENLACEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_VIBCH (ATP synthase gamma chain OS=Vibrio cholerae GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 133 EVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 E+D++ L++ +FV+ + P I LLPL P+ + D+ R + +E +P +LDALL ++ SQ+ + + E+LA E A+RM AM ATDNA L +L +VYN+ RQA IT E+ EIV GA A+ Sbjct: 164 ELDRLYLVFNQFVNTMVQKPKIDQLLPL-PKSD----------------------------SEDMQRDHMWDYI----YEPEPKPLLDALLLRFIESQVYQGVVENLACEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_VIBC3 (ATP synthase gamma chain OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 54/158 (34.18%), Postives = 81/158 (51.27%), Query Frame = 1 Query: 133 EVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 E+D++ L++ +FV+ + P I LLPL P+ + D+ R + +E +P +LDALL ++ SQ+ + + E+LA E A+RM AM ATDNA L +L +VYN+ RQA IT E+ EIV GA A+ Sbjct: 164 ELDRLYLVFNQFVNTMVQKPKIDQLLPL-PKSD----------------------------SEDMQRDHMWDYI----YEPEPKPLLDALLLRFIESQVYQGVVENLACEQAARMVAMKAATDNASNLIDDLQLVYNKARQAAITQELSEIVGGAAAV 288
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PSEE4 (ATP synthase gamma chain OS=Pseudomonas entomophila (strain L48) GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 50/162 (30.86%), Postives = 81/162 (50.00%), Query Frame = 1 Query: 121 FVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 ++ +D++ ++ KF++ + P + L+PL + T + L D + +E D ++LD L+ Y+ SQ+ +A+ E+ A+E A+RM AM NATDNA +L L ++YN+ RQA IT EI EIV GA A+ Sbjct: 160 YLDGRIDRLSVVSNKFINTMTQKPTVEQLVPL-----------------------VATPDQDLKHHWDYL------------YEPDAKELLDGLMVRYVESQVYQAVVENNAAEQAARMIAMKNATDNAGDLISELQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PSEAE (ATP synthase gamma chain OS=Pseudomonas aeruginosa GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 367 FEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +E D +LD LL Y+ SQ+ +A+ E+ A E A+RM AM NATDNA EL +L ++YN+ RQA IT EI EIV GA A+ Sbjct: 207 YEPDAKSLLDGLLVRYVESQVYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_PSEAB (ATP synthase gamma chain OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=atpG PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.083e-14 Identity = 42/80 (52.50%), Postives = 55/80 (68.75%), Query Frame = 1 Query: 367 FEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606 +E D +LD LL Y+ SQ+ +A+ E+ A E A+RM AM NATDNA EL +L ++YN+ RQA IT EI EIV GA A+ Sbjct: 207 YEPDAKSLLDGLLVRYVESQVYQAVVENNACEQAARMIAMKNATDNAGELISDLQLIYNKARQAAITQEISEIVGGAAAV 286 The following BLAST results are available for this feature:
BLAST of CF417522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417522 ID=CF417522; Name=CF417522; organism=Citrus sinensis; type=EST; length=727bpback to top |