CF417522

Overview
NameCF417522
Unique NameCF417522
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_ALKMQ (ATP synthase gamma chain OS=Alkaliphilus metalliredigens (strain QYMF) GN=atpG PE=3 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.130e-21
Identity = 72/202 (35.64%), Postives = 100/202 (49.50%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            KKG  +F +R Y     F +    P+  +AQ I      L+  E VD++ L+YT+FVS +   P +  LLPL P+                     T  EG    E+   R E  S+ P       P ++LD L+P Y+ S +  AL ES  S+  +   AM +ATDNA ++   L + YNR RQA IT EI EIV+GA+AL
Sbjct:  117 KKGRGFFRKRGYDLDGEFTKISENPSFSDAQGIGKLGMELYKQELVDELYLVYTEFVSTITHKPRVVKLLPLEPQ---------------------TGGEG---AEKPKERDEFMSYEP------SPEEVLDYLIPKYIESMLYGALVESSTSQQGATRVAMESATDNATDMIDGLQLQYNRARQASITQEIAEIVSGAEAL 288          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_MICLC (ATP synthase gamma chain OS=Micrococcus luteus (strain ATCC 4698 / IFO 3333 / NCTC 2665) GN=atpG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21
Identity = 64/182 (35.16%), Postives = 98/182 (53.85%), Query Frame = 1
Query:   73 PTAKEAQTIADDVFSLFVSEE----VDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            P A+ A  I + +   F+++     VD++ +++T+FVSLVK +P +  LLPL                                VE +    E     P+ ++E D  ++LDALLP Y+ S+I  A+ +S ASELA+R  AM +A DNA  L K+ +++ N  RQA+IT E+ E++AGADAL
Sbjct:  145 PVAERAAEIGEVLVDAFLTDTADGGVDEIHVVFTEFVSLVKQNPHVVRLLPLE------------------------------VVEEEAATAEDVL--PLYEYEPDAEEVLDALLPKYIESRIFNAMLQSAASELANRQRAMKSAGDNATSLIKDYTLLMNNARQAEITQELTELIAGADAL 294          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CORGB (ATP synthase gamma chain OS=Corynebacterium glutamicum (strain R) GN=atpG PE=3 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 1.927e-21
Identity = 65/156 (41.67%), Postives = 90/156 (57.69%), Query Frame = 1
Query:  139 DKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            D+V ++YT+F+S++  +PV+H LLP+ P               EDE F     E  L+   DV         P  +FE D   +L+ALLP Y++ ++     E+ A+E ASR +AM +ATDNA EL K+LS V N+ RQA+IT EI EIV GA AL
Sbjct:  186 DQVHVVYTEFISMLTQNPVVHQLLPVEP-------------VIEDEIFE--KGEDLLSSSGDV--------EPDYEFEPDADTLLEALLPQYVSRRLFSIFLEAAAAESASRRNAMKSATDNASELVKDLSRVANQARQAQITQEITEIVGGAGAL 318          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CORGL (ATP synthase gamma chain OS=Corynebacterium glutamicum GN=atpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21
Identity = 61/156 (39.10%), Postives = 90/156 (57.69%), Query Frame = 1
Query:  139 DKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            D+V ++YT+F+S++  +PV+H LLP+ P               EDE F           + + + + +    P  +FE D   +L+ALLP Y++ ++     E+ A+E ASR +AM +ATDNA EL K+LS V N+ RQA+IT EI EIV GA AL
Sbjct:  186 DQVHVVYTEFISMLTQNPVVHQLLPVEP-------------VIEDEIFE----------KGEDLLSSSGEVEPDYEFEPDADTLLEALLPQYVSRRLFSIFLEAAAAESASRRNAMKSATDNATELVKDLSRVANQARQAQITQEITEIVGGAGAL 318          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CLOB6 (ATP synthase gamma chain OS=Clostridium botulinum (strain 657 / Type Ba4) GN=atpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21
Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603
            +KG  Y  +     +  ++E   +PT KEA+TIA ++  L+ S+EV +V L+Y++F S VK   +I+ +LP                          TKE K             S +  ++F     + +D +L  YL + IL     S ASE  SRM+AM+ ATDNA +L  NL + +NR RQ+ IT EI EIV GA+A
Sbjct:  118 QKGRMYLKKLGINTLAEYIEIPDVPTTKEARTIAKNIIKLYSSKEVGEVFLVYSEFYSPVKQQVLINKILPF-------------------------TKENK-------------SDNKYIEFNPPVTRFMDEILENYLKATILNCFSNSKASENGSRMTAMNGATDNANDLLDNLDLQFNRLRQSAITQEISEIVGGAEA 280          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CHLTE (ATP synthase gamma chain OS=Chlorobium tepidum GN=atpG PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.517e-21
Identity = 73/201 (36.32%), Postives = 106/201 (52.74%), Query Frame = 1
Query:    4 KGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            KG  +F +R Y     +       +   A+ IAD    +++S EVD+V L+Y +F S++  +     LLP++P G          DA                        +TAS   +  +E  P  I+D L+P +LN+Q+ R + ES A+E A+RM+AM +AT+NA EL + L+I YNR RQA IT E+ EIVAGADAL
Sbjct:  125 KGTEFFRKRGYKLAAAYPGVFQNLSFDSAREIADKASKMYLSGEVDRVVLVYNEFKSVLAPNLRTEQLLPITPEGG---------DA------------------------KTASSEYL--YEPSPAAIIDELVPKHLNTQLWRVMLESNAAEQAARMAAMDSATENAKELIRVLNISYNRARQAAITKELSEIVAGADAL 290          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_RENSM (ATP synthase gamma chain OS=Renibacterium salmoninarum (strain ATCC 33209 / DSM 20767 / IFO 15589) GN=atpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21
Identity = 61/178 (34.27%), Postives = 101/178 (56.74%), Query Frame = 1
Query:   76 TAKE-AQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            TA+E ++T+ +D    F  + VD++ ++YT+F S+V  +P +  LLPL              + +E+E                   +E++   P+ ++E +P  +LDALLP Y+ ++I   + ++ ASELA+R  AM +A+DNA +L K  + + N  RQA+IT E+ EIVAGAD+L
Sbjct:  149 TAQEISKTLLEDFAEEFEKDGVDEIHVVYTRFKSMVVQEPTVIRLLPL--------------EVSEEEV------------------SESSDLLPLYEYEPEPEAVLDALLPRYIEARIFNVMLQAAASELAARQRAMKSASDNARDLVKKFTRLANTARQAEITQELSEIVAGADSL 294          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_CLOBM (ATP synthase gamma chain OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=atpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21
Identity = 69/201 (34.33%), Postives = 101/201 (50.25%), Query Frame = 1
Query:    1 KKGNAYFLRRPYIPVDRFLEGGSLPTAKEAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADA 603
            +KG  Y  +     +  ++E   +PT KEA+TIA ++  L+ S+EV +V L+Y++F S VK   +I+ +LP                          TKE K             S +  ++F     + +D +L  YL + IL     S ASE  SRM+AM+ ATDNA +L  NL + +NR RQ+ IT EI EIV GA+A
Sbjct:  118 QKGRMYLKKLGINTLAEYIEIPDVPTTKEARTIAKNIIKLYSSKEVGEVFLVYSEFYSPVKQQVLINKILPF-------------------------TKENK-------------SDNKYIEFNPPVTRFVDEILENYLKATILNCFSNSKASENGSRMTAMNGATDNANDLLDNLDLQFNRLRQSAITQEISEIVGGAEA 280          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_BARHE (ATP synthase gamma chain OS=Bartonella henselae GN=atpG PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.287e-21
Identity = 64/174 (36.78%), Postives = 97/174 (55.75%), Query Frame = 1
Query:   85 EAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPLSPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            EA  I+  +  LF  +  D   L Y++FVS++   PV   L+P+         +G  V+ AE         E K+    D+        S +  +E D   +LD L+P  L+ QI RAL E++A E+ ++M+AM NA+ NA E+   L++ YNRQRQA+IT E++EI+AGA+AL
Sbjct:  152 EAAMISQKIVDLFDDDAFDVCTLFYSEFVSVINQRPVAFGLVPMVS-------SGGAVETAE--------VEQKIDNSADLQ-------SIVYDYEPDAASLLDVLVPRNLSVQIFRALLENVAGEMGAKMTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 303          
BLAST of CF417522 vs. ExPASy Swiss-Prot
Match: ATPG_BART1 (ATP synthase gamma chain OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=atpG PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 4.293e-21
Identity = 62/175 (35.43%), Postives = 100/175 (57.14%), Query Frame = 1
Query:   85 EAQTIADDVFSLFVSEEVDKVELLYTKFVSLVKSDPVIHTLLPL-SPRGEICDVNGVCVDAAEDEFFRLTTKEGKLTVERDVVRTETASFSPILQFEQDPVQILDALLPLYLNSQILRALQESLASELASRMSAMSNATDNAMELKKNLSIVYNRQRQAKITGEILEIVAGADAL 606
            EA  I+  +  LF     D   L Y++FVS++   P    L+P+ +P+          V+A +    + T+K+ +  V   +V           ++E D   +L+AL+P  L+ QI RAL E++A E+ ++M+AM NA+ NA E+   L++ YNRQRQA+IT E++EI+AGA+AL
Sbjct:  152 EALVISQRIVDLFNEGAFDVCTLFYSEFVSVINQRPTAFGLIPMGAPKA--------AVEATDVVEQKETSKDSQSIVHEAIV----------YEYEPDAASLLEALVPRNLSVQIFRALLENVAGEMGAKMTAMDNASRNAGEMINKLTVAYNRQRQAQITTELIEIIAGAEAL 308          
The following BLAST results are available for this feature:
BLAST of CF417522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPG_ALKMQ1.130e-2135.64ATP synthase gamma chain OS=Alkaliphilus metallire... [more]
ATPG_MICLC1.927e-2135.16ATP synthase gamma chain OS=Micrococcus luteus (st... [more]
ATPG_CORGB1.927e-2141.67ATP synthase gamma chain OS=Corynebacterium glutam... [more]
ATPG_CORGL2.517e-2139.10ATP synthase gamma chain OS=Corynebacterium glutam... [more]
ATPG_CLOB62.517e-2134.33ATP synthase gamma chain OS=Clostridium botulinum ... [more]
ATPG_CHLTE2.517e-2136.32ATP synthase gamma chain OS=Chlorobium tepidum GN=... [more]
ATPG_RENSM3.287e-2134.27ATP synthase gamma chain OS=Renibacterium salmonin... [more]
ATPG_CLOBM3.287e-2134.33ATP synthase gamma chain OS=Clostridium botulinum ... [more]
ATPG_BARHE3.287e-2136.78ATP synthase gamma chain OS=Bartonella henselae GN... [more]
ATPG_BART14.293e-2135.43ATP synthase gamma chain OS=Bartonella tribocorum ... [more]

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Properties
Property NameValue
Genbank descriptionUSDA-FP_115000-452 Citrus sinensis: Insect-damaged immature leaves/stems from field collected Valencia orange Citrus sinensis cDNA clone IDFL-006_B12 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF417522 ID=CF417522; Name=CF417522; organism=Citrus sinensis; type=EST; length=727bp
AAGAAGGGTAATGCATATTTCCTTCGTAGGCCTTATATTCCTGTTGATAG
ATTTCTTGAGGGAGGTTCATTACCTACTGCTAAAGAAGCTCAGACTATAG
CAGATGATGTGTTTTCACTCTTTGTTAGTGAAGAAGTTGACAAGGTGGAG
CTTTTATACACAAAGTTTGTGTCTTTGGTTAAGTCTGATCCTGTGATTCA
CACTTTGCTTCCACTATCACCGAGGGGAGAGATTTGTGATGTGAATGGTG
TTTGCGTTGATGCTGCTGAGGATGAGTTCTTTAGATTGACAACTAAGGAA
GGAAAGTTAACTGTTGAGAGAGATGTTGTGAGAACTGAGACTGCTTCTTT
CTCACCCATTTTGCAATTTGAGCAGGACCCAGTTCAGATTCTTGATGCTC
TTTTGCCCCTCTATCTAAACAGCCAGATCTTGAGGGCTTTGCAGGAATCC
TTAGCCAGCGAGCTTGCTTCAAGAATGAGTGCCATGAGCAATGCAACTGA
TAATGCAATGGAGTTGAAGAAGAACTTGTCTATCGTCTACAACAGGCAGC
GCCAGGCCAAAATTACTGGAGAGATTTTGGAGATTGTTGCTGGTGCCGAT
GCTTTAGTGTAAAGAATTATGCGGGGCTTCTCACATCTTACTCAATTGTC
CATCTTTGTAGGCAATTTTACGACTGTTTCCCTTATTGATTCAAATATGC
TTGGTTTACCAGGAGTTATTCAGAATT
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