CF417530
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 9.416e-14 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 224 +FGG+D +Y G +VPV+ +GYWQ + + ++GE C+ GC AI D+GTSLL+GPT+ I I IGAS Sbjct: 227 MFGGIDSSYYTGSLNWVPVSAEGYWQITVDSITMNGEAIA-CAEGCQAIVDTGTSLLSGPTSPIANIQSYIGAS 299
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.606e-13 Identity = 35/88 (39.77%), Postives = 55/88 (62.50%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS----GVISQECKTL 254 +FGG+D +Y G +VP++ +GYWQ + + ++G++ C+ GC AI D+GTSLL+GPT I I IGAS G ++ C ++ Sbjct: 227 MFGGIDSSYYTGSLNWVPLSSEGYWQITVDSITMNGQSIA-CNGGCQAIVDTGTSLLSGPTNAIANIQSKIGASQNSQGQMAVSCSSI 313
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPE_CHICK (Embryonic pepsinogen OS=Gallus gallus PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 2.740e-13 Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 224 VFGG+D ++ G ++PV+ +GYWQ M ++++ + CS+GC AI D+GTSL+AGP + I I A+GA+ Sbjct: 227 VFGGIDESYFTGSINWIPVSYQGYWQISMDSIIVNKQEIA-CSSGCQAIIDTGTSLVAGPASDINDIQSAVGAN 299
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_RAT (Gastricsin OS=Rattus norvegicus GN=Pgc PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13 Identity = 36/74 (48.65%), Postives = 50/74 (67.57%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCST-GCNAIADSGTSLLAGPTTIITQINHAIGA 221 VFGGVD + Y GE T+VPVT++ YWQ + D LI + +G+CS+ GC I D+GTSLL P ++++ IGA Sbjct: 229 VFGGVDKNLYTGEITWVPVTQELYWQITIDDFLIGDQASGWCSSQGCQGIVDTGTSLLVMPAQYLSELLQTIGA 302
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: CATD_CLUHA (Cathepsin D OS=Clupea harengus GN=ctsd PE=1 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.578e-13 Identity = 35/80 (43.75%), Postives = 47/80 (58.75%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQE 242 + GG DP +Y G+ YVPVT++ YWQ M + I + T C GC AI D+GTSL+ GP + + AIGA +I E Sbjct: 232 LLGGTDPKYYTGDFNYVPVTRQAYWQIHMDGMSIGSQLT-LCKDGCEAIVDTGTSLITGPPAEVRALQKAIGAIPLIQGE 310
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.673e-13 Identity = 35/73 (47.95%), Postives = 46/73 (63.01%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGA 221 VFGGVD Y G+ + PVT++ YWQ + LI G+ TG+CS GC AI D+GTSLL P ++ + A GA Sbjct: 227 VFGGVDNSLYTGQIFWTPVTQELYWQIGVEQFLIGGQATGWCSQGCQAIVDTGTSLLTVPQQYLSALQQATGA 299
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 4.673e-13 Identity = 35/74 (47.30%), Postives = 49/74 (66.22%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYC-STGCNAIADSGTSLLAGPTTIITQINHAIGA 221 VFGGVD + Y GE T++PVT++ YWQ + D LI + +G+C S+GC I D+GTSLL P + ++ IGA Sbjct: 229 VFGGVDENLYTGELTWIPVTQELYWQITIDDFLIGNQASGWCSSSGCQGIVDTGTSLLVMPAQYLNELLQTIGA 302
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2) HSP 1 Score: 74.3294 bits (181), Expect = 6.103e-13 Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS----GVISQECKTL 254 +FGGVD Y G+ + PVT++ YWQ + + LI G+ TG+C GC AI D+GTSLL P ++ + A GA G ++ C ++ Sbjct: 227 IFGGVDNSLYTGQIFWAPVTQELYWQIGVEEFLIGGQATGWCQQGCQAIVDTGTSLLTVPQQFMSALQQATGAQQDQYGQLAVNCNSI 314
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPC_RHIFE (Gastricsin OS=Rhinolophus ferrumequinum GN=PGC PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 39/90 (43.33%), Postives = 55/90 (61.11%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGASGVISQECKTLVDQYGK 272 +FGGVD Y+G+ + PVT++ YWQ + + LI G+ +G+CS GC AI D+GTSLL P ++ + A GA QE DQYG+ Sbjct: 227 IFGGVDNSLYQGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSQGCQAIVDTGTSLLTVPQQYMSALLQATGA-----QE-----DQYGQ 306
BLAST of CF417530 vs. ExPASy Swiss-Prot
Match: PEPA_SUNMU (Pepsin A OS=Suncus murinus GN=PGA PE=1 SV=2) HSP 1 Score: 73.9442 bits (180), Expect = 7.971e-13 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 3 Query: 3 VFGGVDPDHYKGEHTYVPVTKKGYWQFEMGDVLIDGETTGYCSTGCNAIADSGTSLLAGPTTIITQINHAIGAS 224 +FGG+D +Y G +VP++ +GYWQ + + ++G+ CS C AI D+GTSLL+GP I I +IGAS Sbjct: 227 IFGGIDSSYYTGNLNWVPLSSEGYWQITVDSITMNGQAIA-CSGSCQAIVDTGTSLLSGPNNAIANIQKSIGAS 299 The following BLAST results are available for this feature:
BLAST of CF417530 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >CF417530 ID=CF417530; Name=CF417530; organism=Citrus sinensis; type=EST; length=660bpback to top |